| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARHTDLAIEYEVGVARALPQGSQGRCAPHTFKKQPLHQYARRPLFPLRAPLCICFRVADSSFLCHKAFFCGRSDYFRIEDRLHCVFQMNLVLFIDPLTRWGNPKVNSILNLFGSGLFDAAFVHCKLHNNGGMSAEEEIGPGAEPMRGPSLATYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:49)
[INFO] Main: Simulation completed successfully. (00:01:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0631 | |
| 2 | D | A | -1.9856 | |
| 3 | A | A | -1.1331 | |
| 4 | M | A | -0.4420 | |
| 5 | K | A | -2.0623 | |
| 6 | R | A | -1.9981 | |
| 7 | G | A | -0.4685 | |
| 8 | L | A | 1.1059 | |
| 9 | C | A | 1.6798 | |
| 10 | C | A | 2.3469 | |
| 11 | V | A | 3.4389 | |
| 12 | L | A | 3.7399 | |
| 13 | L | A | 4.1216 | |
| 14 | L | A | 3.4148 | |
| 15 | C | A | 2.5856 | |
| 16 | G | A | 1.7953 | |
| 17 | A | A | 2.5674 | |
| 18 | V | A | 3.4742 | |
| 19 | F | A | 3.8219 | |
| 20 | V | A | 2.9843 | |
| 21 | S | A | 1.0796 | |
| 22 | P | A | -0.3449 | |
| 23 | S | A | -0.9935 | |
| 24 | Q | A | -1.8607 | |
| 25 | E | A | -1.7738 | |
| 26 | I | A | 0.0647 | |
| 27 | H | A | -1.2037 | |
| 28 | A | A | -1.2478 | |
| 29 | R | A | -2.5094 | |
| 30 | H | A | -2.2223 | |
| 31 | T | A | -1.4335 | |
| 32 | D | A | -1.2355 | |
| 33 | L | A | 0.8724 | |
| 34 | A | A | 1.0012 | |
| 35 | I | A | 1.5177 | |
| 36 | E | A | -0.2354 | |
| 37 | Y | A | 0.7089 | |
| 38 | E | A | -0.5827 | |
| 39 | V | A | 1.3646 | |
| 40 | G | A | 1.0076 | |
| 41 | V | A | 1.9890 | |
| 42 | A | A | 0.7596 | |
| 43 | R | A | -0.8121 | |
| 44 | A | A | 0.2402 | |
| 45 | L | A | 0.4467 | |
| 46 | P | A | -0.5127 | |
| 47 | Q | A | -1.3791 | |
| 48 | G | A | -1.3304 | |
| 49 | S | A | -1.5174 | |
| 50 | Q | A | -1.9766 | |
| 51 | G | A | -1.6531 | |
| 52 | R | A | -2.0453 | |
| 53 | C | A | -0.6391 | |
| 54 | A | A | -0.6222 | |
| 55 | P | A | -0.4820 | |
| 56 | H | A | -0.7197 | |
| 57 | T | A | -0.3263 | |
| 58 | F | A | 0.1195 | |
| 59 | K | A | -2.0954 | |
| 60 | K | A | -2.5350 | |
| 61 | Q | A | -2.2135 | |
| 62 | P | A | -1.0170 | |
| 63 | L | A | 0.6269 | |
| 64 | H | A | -0.7086 | |
| 65 | Q | A | -1.0903 | |
| 66 | Y | A | -0.2360 | |
| 67 | A | A | -0.8989 | |
| 68 | R | A | -2.4942 | |
| 69 | R | A | -2.2115 | |
| 70 | P | A | -0.7348 | |
| 71 | L | A | 0.8643 | |
| 72 | F | A | 1.3583 | |
| 73 | P | A | 0.6873 | |
| 74 | L | A | 1.0946 | |
| 75 | R | A | -0.9273 | |
| 76 | A | A | -0.4417 | |
| 77 | P | A | -0.4462 | |
| 78 | L | A | 0.3241 | |
| 79 | C | A | 0.0000 | |
| 80 | I | A | 1.4462 | |
| 81 | C | A | 1.7415 | |
| 82 | F | A | 1.5137 | |
| 83 | R | A | -0.4593 | |
| 84 | V | A | 0.8013 | |
| 85 | A | A | -0.4177 | |
| 86 | D | A | -1.7861 | |
| 87 | S | A | -0.5224 | |
| 88 | S | A | 0.5421 | |
| 89 | F | A | 2.3877 | |
| 90 | L | A | 2.1320 | |
| 91 | C | A | 1.1718 | |
| 92 | H | A | -0.5381 | |
| 93 | K | A | 0.2553 | |
| 94 | A | A | 1.5852 | |
| 95 | F | A | 3.1424 | |
| 96 | F | A | 3.0154 | |
| 97 | C | A | 1.4538 | |
| 98 | G | A | -0.5590 | |
| 99 | R | A | -2.3539 | |
| 100 | S | A | -1.4335 | |
| 101 | D | A | -1.5318 | |
| 102 | Y | A | 0.8522 | |
| 103 | F | A | 1.9272 | |
| 104 | R | A | -0.3274 | |
| 105 | I | A | 0.5424 | |
| 106 | E | A | -2.3282 | |
| 107 | D | A | -2.8694 | |
| 108 | R | A | -2.2680 | |
| 109 | L | A | 0.1053 | |
| 110 | H | A | -0.0966 | |
| 111 | C | A | 1.6054 | |
| 112 | V | A | 2.7551 | |
| 113 | F | A | 2.3714 | |
| 114 | Q | A | -0.0930 | |
| 115 | M | A | 0.2253 | |
| 116 | N | A | -0.6729 | |
| 117 | L | A | 1.1584 | |
| 118 | V | A | 2.6373 | |
| 119 | L | A | 2.9754 | |
| 120 | F | A | 3.0868 | |
| 121 | I | A | 2.3315 | |
| 122 | D | A | -0.1863 | |
| 123 | P | A | -0.0812 | |
| 124 | L | A | 0.7296 | |
| 125 | T | A | -0.3761 | |
| 126 | R | A | -1.3107 | |
| 127 | W | A | -0.0463 | |
| 128 | G | A | -1.2265 | |
| 129 | N | A | -1.8378 | |
| 130 | P | A | -1.1771 | |
| 131 | K | A | -1.8686 | |
| 132 | V | A | -0.0605 | |
| 133 | N | A | -1.0325 | |
| 134 | S | A | -0.5358 | |
| 135 | I | A | 0.8583 | |
| 136 | L | A | 0.4365 | |
| 137 | N | A | -0.2161 | |
| 138 | L | A | 1.4550 | |
| 139 | F | A | 1.4809 | |
| 140 | G | A | 0.8877 | |
| 141 | S | A | 0.5310 | |
| 142 | G | A | 0.7385 | |
| 143 | L | A | 1.8077 | |
| 144 | F | A | 2.1613 | |
| 145 | D | A | 0.1961 | |
| 146 | A | A | 0.5863 | |
| 147 | A | A | 1.3364 | |
| 148 | F | A | 2.0547 | |
| 149 | V | A | 1.1038 | |
| 150 | H | A | -0.1470 | |
| 151 | C | A | -0.1623 | |
| 152 | K | A | -0.7899 | |
| 153 | L | A | -0.2009 | |
| 154 | H | A | -1.5249 | |
| 155 | N | A | -2.3003 | |
| 156 | N | A | -2.1418 | |
| 157 | G | A | -1.3876 | |
| 158 | G | A | -1.0084 | |
| 159 | M | A | -0.2887 | |
| 160 | S | A | -0.8870 | |
| 161 | A | A | -1.5952 | |
| 162 | E | A | -2.8116 | |
| 163 | E | A | -3.0481 | |
| 164 | E | A | -2.3694 | |
| 165 | I | A | 0.0062 | |
| 166 | G | A | -0.4098 | |
| 167 | P | A | -0.5651 | |
| 168 | G | A | -0.8197 | |
| 169 | A | A | -0.8129 | |
| 170 | E | A | -2.0519 | |
| 171 | P | A | -1.2396 | |
| 172 | M | A | -0.5932 | |
| 173 | R | A | -1.9587 | |
| 174 | G | A | -1.0273 | |
| 175 | P | A | -0.4609 | |
| 176 | S | A | -0.0042 | |
| 177 | L | A | 1.5119 | |
| 178 | A | A | 1.0133 | |
| 179 | T | A | 1.0967 | |
| 180 | Y | A | 1.5001 | |
| 181 | P | A | 0.7407 | |
| 182 | Y | A | 1.1282 | |
| 183 | D | A | -0.4774 | |
| 184 | V | A | 0.8133 | |
| 185 | P | A | -0.2221 | |
| 186 | D | A | -1.0204 | |
| 187 | Y | A | 0.6197 | |
| 188 | A | A | 0.1865 |