| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHDGADVREAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGHPLPAAPPPSPLYVPPPPSSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLKTPKDNVYDPSYFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9430 | |
| 2 | L | A | 1.9622 | |
| 3 | P | A | 0.8327 | |
| 4 | P | A | 0.3775 | |
| 5 | T | A | 0.1258 | |
| 6 | T | A | 0.1305 | |
| 7 | P | A | 0.1815 | |
| 8 | V | A | 1.2174 | |
| 9 | A | A | 0.0949 | |
| 10 | K | A | -1.0060 | |
| 11 | V | A | -0.1256 | |
| 12 | Q | A | -1.3710 | |
| 13 | S | A | -1.5283 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3968 | |
| 16 | E | A | -2.4256 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4620 | |
| 20 | P | A | 0.1304 | |
| 21 | T | A | 0.1592 | |
| 22 | S | A | -0.0961 | |
| 23 | L | A | 0.0943 | |
| 24 | F | A | -0.0347 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2719 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9001 | |
| 31 | R | A | -2.6980 | |
| 32 | L | A | -0.8133 | |
| 33 | L | A | 1.1504 | |
| 34 | T | A | 1.3678 | |
| 35 | V | A | 1.8231 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2275 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2010 | |
| 40 | A | A | 0.0302 | |
| 41 | D | A | 0.0734 | |
| 42 | I | A | 1.8646 | |
| 43 | V | A | 2.5057 | |
| 44 | V | A | 1.7007 | |
| 45 | N | A | -0.5368 | |
| 46 | G | A | -0.3453 | |
| 47 | K | A | -0.1273 | |
| 48 | V | A | 2.2028 | |
| 49 | L | A | 2.5544 | |
| 50 | V | A | 1.6979 | |
| 51 | P | A | 0.6569 | |
| 52 | K | A | -0.0834 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1417 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3801 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2597 | |
| 70 | K | A | -1.7813 | |
| 71 | F | A | -0.6301 | |
| 72 | A | A | -0.5749 | |
| 73 | L | A | -0.8610 | |
| 74 | P | A | -1.2083 | |
| 75 | Q | A | -2.5060 | |
| 76 | K | A | -3.1072 | |
| 77 | D | A | -2.9877 | |
| 78 | F | A | -1.6676 | |
| 79 | Y | A | -1.8835 | |
| 80 | D | A | -2.6848 | |
| 81 | P | A | -2.3028 | |
| 82 | E | A | -3.0514 | |
| 83 | K | A | -3.3918 | |
| 84 | E | A | -2.4591 | |
| 85 | R | A | -1.2921 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6709 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9649 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3815 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7044 | |
| 99 | G | A | -0.5267 | |
| 100 | P | A | -0.3718 | |
| 101 | L | A | 0.1079 | |
| 102 | G | A | -0.1511 | |
| 103 | K | A | -0.5342 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4179 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1327 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1515 | |
| 110 | L | A | -0.2996 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3632 | |
| 113 | K | A | -0.8190 | |
| 114 | L | A | -1.2873 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2787 | |
| 117 | T | A | -1.0268 | |
| 118 | E | A | -1.8683 | |
| 119 | N | A | -2.2024 | |
| 120 | P | A | -1.9739 | |
| 121 | T | A | -1.6495 | |
| 122 | E | A | -2.4368 | |
| 123 | P | A | -1.2783 | |
| 124 | Q | A | -1.6207 | |
| 125 | H | A | -1.6825 | |
| 126 | D | A | -2.3934 | |
| 127 | G | A | -1.9070 | |
| 128 | A | A | -1.3215 | |
| 129 | D | A | -2.3153 | |
| 130 | V | A | -1.7471 | |
| 131 | R | A | -1.7290 | |
| 132 | E | A | -1.7009 | |
| 133 | A | A | -0.6069 | |
| 134 | F | A | -0.3320 | |
| 135 | S | A | -0.3188 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4986 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5568 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1886 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1843 | |
| 157 | D | A | 0.3550 | |
| 158 | L | A | 0.8197 | |
| 159 | A | A | 0.1914 | |
| 160 | E | A | -1.4523 | |
| 161 | P | A | -0.2159 | |
| 162 | C | A | 0.1836 | |
| 163 | P | A | -0.1681 | |
| 164 | G | A | -0.0725 | |
| 165 | L | A | 0.5946 | |
| 166 | P | A | -0.1125 | |
| 167 | P | A | -0.3394 | |
| 168 | G | A | -0.4215 | |
| 169 | A | A | -0.0303 | |
| 170 | C | A | 0.6505 | |
| 171 | P | A | 0.5291 | |
| 172 | P | A | 0.8640 | |
| 173 | I | A | 2.0455 | |
| 174 | Q | A | 0.8880 | |
| 175 | L | A | 1.5247 | |
| 176 | V | A | 0.8772 | |
| 177 | N | A | -0.2865 | |
| 178 | S | A | 0.0305 | |
| 179 | V | A | 0.4291 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3883 | |
| 182 | D | A | 0.0893 | |
| 183 | G | A | -0.1524 | |
| 184 | D | A | -0.5221 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1354 | |
| 190 | F | A | 0.0622 | |
| 191 | G | A | -0.1045 | |
| 192 | N | A | -0.2446 | |
| 193 | M | A | -0.0865 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3867 | |
| 197 | E | A | -2.6012 | |
| 198 | L | A | -1.2130 | |
| 199 | Q | A | -2.5452 | |
| 200 | Q | A | -3.2958 | |
| 201 | D | A | -3.5384 | |
| 202 | R | A | -3.3205 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4466 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3573 | |
| 211 | S | A | -1.7093 | |
| 212 | T | A | -1.4212 | |
| 213 | R | A | -2.0386 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1543 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3834 | |
| 220 | L | A | 0.6209 | |
| 221 | K | A | -1.0806 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8065 | |
| 224 | N | A | -1.4820 | |
| 225 | E | A | -1.2226 | |
| 226 | A | A | -0.5912 | |
| 227 | Y | A | -0.3626 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6668 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0805 | |
| 234 | F | A | 0.2634 | |
| 235 | G | A | -0.8056 | |
| 236 | R | A | -2.5775 | |
| 237 | R | A | -2.8164 | |
| 238 | E | A | -2.0936 | |
| 239 | Q | A | -0.1353 | |
| 240 | V | A | 1.4516 | |
| 241 | Y | A | 1.2210 | |
| 242 | A | A | 0.1583 | |
| 243 | R | A | -1.2134 | |
| 244 | H | A | -1.0311 | |
| 245 | F | A | 0.0142 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4167 | |
| 249 | A | A | -1.1025 | |
| 250 | G | A | -0.9787 | |
| 251 | P | A | -0.7325 | |
| 252 | V | A | -0.4386 | |
| 253 | G | A | -0.8946 | |
| 254 | H | A | -1.1200 | |
| 255 | P | A | -0.4494 | |
| 256 | L | A | 0.4992 | |
| 257 | P | A | 0.0294 | |
| 258 | A | A | 0.1289 | |
| 259 | A | A | 0.3468 | |
| 260 | P | A | -0.3092 | |
| 261 | P | A | -0.1924 | |
| 262 | P | A | 0.0608 | |
| 263 | S | A | 0.6224 | |
| 264 | P | A | 0.6899 | |
| 265 | L | A | 1.9318 | |
| 266 | Y | A | 1.7895 | |
| 267 | V | A | 1.9477 | |
| 268 | P | A | 1.1615 | |
| 269 | P | A | 0.6759 | |
| 270 | P | A | -0.1758 | |
| 271 | P | A | -0.1419 | |
| 272 | S | A | -0.3296 | |
| 273 | S | A | 0.1953 | |
| 274 | P | A | 0.1860 | |
| 275 | Y | A | 1.4025 | |
| 276 | A | A | 1.2421 | |
| 277 | V | A | 2.2109 | |
| 278 | L | A | 1.7311 | |
| 279 | P | A | 0.2974 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.3213 | |
| 282 | D | A | -0.2979 | |
| 283 | Y | A | 1.1229 | |
| 284 | F | A | 0.8037 | |
| 285 | G | A | 0.1957 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9291 | |
| 291 | L | A | 1.6274 | |
| 292 | V | A | 0.6594 | |
| 293 | S | A | -0.1521 | |
| 294 | S | A | -0.9522 | |
| 295 | D | A | -1.8427 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0926 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6359 | |
| 301 | R | A | -1.8120 | |
| 302 | P | A | -0.9273 | |
| 303 | F | A | -0.1814 | |
| 304 | W | A | -0.5618 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0871 | |
| 307 | R | A | -2.8347 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2708 | |
| 310 | G | A | -1.2269 | |
| 311 | N | A | -1.2555 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8024 | |
| 319 | N | A | -0.9235 | |
| 320 | E | A | -1.0357 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3022 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0469 | |
| 333 | N | A | 0.5490 | |
| 334 | F | A | 1.7316 | |
| 335 | T | A | 0.7510 | |
| 336 | I | A | 0.4544 | |
| 337 | S | A | -0.9708 | |
| 338 | Q | A | -2.0015 | |
| 339 | Q | A | -1.9479 | |
| 340 | L | A | -0.3691 | |
| 341 | K | A | -1.8130 | |
| 342 | T | A | -1.3287 | |
| 343 | P | A | -1.4384 | |
| 344 | K | A | -2.5676 | |
| 345 | D | A | -2.4822 | |
| 346 | N | A | -1.5881 | |
| 347 | V | A | 0.5447 | |
| 348 | Y | A | 1.0380 | |
| 349 | D | A | -0.1638 | |
| 350 | P | A | -0.4896 | |
| 351 | S | A | -0.4990 | |
| 352 | Y | A | -0.8069 | |
| 353 | F | A | -1.1523 | |
| 354 | K | A | -1.9548 | |
| 355 | N | A | -1.7703 | |
| 356 | Y | A | -0.0748 | |
| 357 | L | A | 0.6413 | |
| 358 | R | A | 0.9514 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3699 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0995 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0950 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7005 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3018 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3040 | |
| 376 | L | A | -1.6987 | |
| 377 | D | A | -1.9636 | |
| 378 | P | A | -1.0260 | |
| 379 | G | A | -1.0068 | |
| 380 | V | A | -0.9255 | |
| 381 | L | A | -0.5267 | |
| 382 | A | A | -0.6518 | |
| 383 | H | A | -0.7977 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4066 | |
| 386 | T | A | -0.5455 | |
| 387 | M | A | -0.2938 | |
| 388 | N | A | -0.8603 | |
| 389 | P | A | -1.2400 | |
| 390 | T | A | -1.4233 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4050 | |
| 393 | E | A | -2.7290 | |
| 394 | N | A | -2.3273 | |
| 395 | W | A | -1.3123 | |
| 396 | N | A | -1.0095 | |
| 397 | L | A | -0.1681 | |
| 398 | G | A | 0.5439 | |
| 399 | F | A | 2.4377 | |
| 400 | V | A | 1.8544 | |
| 401 | P | A | 0.0532 | |
| 402 | P | A | -1.7963 | |
| 403 | K | A | -3.3103 | |
| 404 | E | A | -3.7606 | |
| 405 | R | A | -3.8831 | |
| 406 | E | A | -3.7738 | |
| 407 | D | A | -2.8575 | |
| 408 | P | A | -1.7557 | |
| 409 | Y | A | -0.9807 | |
| 410 | K | A | -2.1151 | |
| 411 | G | A | -0.6334 | |
| 412 | L | A | 0.6803 | |
| 413 | I | A | 1.5916 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3908 | |
| 416 | E | A | -1.6856 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9365 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0247 | |
| 421 | E | A | -2.7420 | |
| 422 | R | A | -2.5568 | |
| 423 | F | A | -1.2407 | |
| 424 | S | A | -1.4467 | |
| 425 | Q | A | -1.8428 | |
| 426 | D | A | -2.8963 | |
| 427 | L | A | -1.9803 | |
| 428 | D | A | -2.7661 | |
| 429 | Q | A | -2.6159 | |
| 430 | F | A | -1.4210 | |
| 431 | A | A | -0.9018 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5288 | |
| 435 | K | A | -0.6695 | |
| 436 | F | A | 0.1649 | |
| 437 | L | A | 1.0444 | |
| 438 | Y | A | 0.8410 | |
| 439 | Q | A | -0.2640 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine