Project name: query_structure

Status: done

Started: 2026-03-16 22:55:45
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Chain sequence(s) A: AVNFAAVNFAAVNFAAVNFAAVHAVNFAAVHAVNFAAVNFAAVHAVHAVNFAAVNFAAVNFAAVNFAAVNFAAVHAVNFAAVHAVNFAAVNFAAVHAVHAVNFA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-0.227
Maximal score value
3.1451
Average score
1.3338
Total score value
138.713

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.8053
2 V A 1.6883
3 N A 0.6238
4 F A 1.9328
5 A A 0.8927
6 A A 0.9847
7 V A 1.2981
8 N A 0.5508
9 F A 1.9594
10 A A 0.9644
11 A A 1.1832
12 V A 2.0461
13 N A 0.7725
14 F A 2.2309
15 A A 1.0707
16 A A 1.2229
17 V A 2.1628
18 N A 0.5455
19 F A 2.2242
20 A A 1.3483
21 A A 1.3683
22 V A 2.4567
23 H A 1.5368
24 A A 1.8561
25 V A 2.7826
26 N A 1.7654
27 F A 3.1451
28 A A 2.0118
29 A A 1.3013
30 V A 1.6993
31 H A 0.4549
32 A A 0.9921
33 V A 1.3795
34 N A 0.6429
35 F A 2.1808
36 A A 1.2465
37 A A 1.0347
38 V A 1.6714
39 N A 0.2640
40 F A 1.3524
41 A A 0.7892
42 A A 0.7675
43 V A 1.8855
44 H A 0.4802
45 A A 0.7696
46 V A 1.5740
47 H A 0.2465
48 A A 0.5337
49 V A 1.8393
50 N A 0.9111
51 F A 2.5413
52 A A 1.3893
53 A A 0.9058
54 V A 1.9113
55 N A 0.4670
56 F A 2.2270
57 A A 0.7994
58 A A 0.9591
59 V A 1.4712
60 N A 0.1675
61 F A 1.7219
62 A A 1.0634
63 A A 0.9851
64 V A 1.8826
65 N A 0.7179
66 F A 2.4587
67 A A 1.2971
68 A A 1.4380
69 V A 2.3903
70 N A 1.1934
71 F A 2.5863
72 A A 0.0000
73 A A 1.0599
74 V A 1.1900
75 H A -0.2270
76 A A 0.7193
77 V A 1.7457
78 N A 1.0372
79 F A 2.8739
80 A A 1.6154
81 A A 1.2466
82 V A 1.9070
83 H A 0.0959
84 A A 0.6483
85 V A 1.7584
86 N A 0.9540
87 F A 2.5044
88 A A 1.9033
89 A A 1.5944
90 V A 2.3488
91 N A 1.1699
92 F A 2.1030
93 A A 0.9555
94 A A 1.1712
95 V A 1.9180
96 H A 0.5567
97 A A 0.9639
98 V A 1.5368
99 H A 0.1267
100 A A 0.5882
101 V A 1.5525
102 N A 0.3728
103 F A 1.7870
104 A A 0.9151
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Laboratory of Theory of Biopolymers 2018