| Chain sequence(s) |
A: APAAAACPPLSCCGLCPAAAACPPLSCCGL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0349 | |
| 2 | P | A | -0.1574 | |
| 3 | A | A | 0.0881 | |
| 4 | A | A | 0.2012 | |
| 5 | A | A | 0.1893 | |
| 6 | A | A | 0.3906 | |
| 7 | C | A | 0.8684 | |
| 8 | P | A | 0.6672 | |
| 9 | P | A | 0.7758 | |
| 10 | L | A | 1.6975 | |
| 11 | S | A | 1.0485 | |
| 12 | C | A | 1.3037 | |
| 13 | C | A | 1.4450 | |
| 14 | G | A | 0.9613 | |
| 15 | L | A | 1.7451 | |
| 16 | C | A | 1.0480 | |
| 17 | P | A | 0.4069 | |
| 18 | A | A | 0.3578 | |
| 19 | A | A | 0.4542 | |
| 20 | A | A | 0.1543 | |
| 21 | A | A | 0.1808 | |
| 22 | C | A | 0.5628 | |
| 23 | P | A | 0.4346 | |
| 24 | P | A | 0.5701 | |
| 25 | L | A | 1.7921 | |
| 26 | S | A | 1.0025 | |
| 27 | C | A | 1.2883 | |
| 28 | C | A | 1.4459 | |
| 29 | G | A | 1.1537 | |
| 30 | L | A | 1.7342 |