Project name: query_structure

Status: done

Started: 2026-03-16 23:31:05
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Chain sequence(s) A: SSSVPTKLEVVAATPTSLLISWDAGYWFIDYYRITYGETGGNSPVQEFTVPGYSSTATISGLSPGVDYTITVYAYYDNYGWSPISINYRT
C: EYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYAQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQ
B: SSVPTKLEVVAATPTSLLISWDAGYWFIDYYRITYGETGGNSPVQEFTVPGYSSTATISGLSPGVDYTITVYAYYDNYGWSPISINYRT
D: EYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYAQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:18)
Show buried residues

Minimal score value
-3.684
Maximal score value
1.5212
Average score
-0.879
Total score value
-290.9424

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S A -0.2520
3 S A -0.3288
4 V A 0.0000
5 P A 0.0000
6 T A -1.3645
7 K A -2.3554
8 L A 0.0000
9 E A -1.8139
10 V A 0.0179
11 V A 1.3379
12 A A 0.7894
13 A A 0.2456
14 T A -0.2117
15 P A -0.8024
16 T A -0.7133
17 S A -0.3127
18 L A 0.0000
19 L A 0.6310
20 I A 0.0000
21 S A -0.5698
22 W A 0.0000
23 D A -1.3074
24 A A -0.1804
25 G A -0.0933
26 Y A 1.0236
27 W A 0.5309
28 F A 0.4669
29 I A 0.0000
30 D A -0.0718
31 Y A 0.5406
32 Y A 0.0000
33 R A -0.4278
34 I A 0.0000
35 T A 0.0000
36 Y A -0.5938
37 G A -1.2439
38 E A -2.4228
39 T A -1.6335
40 G A -1.4864
41 G A -1.7443
42 N A -1.8032
43 S A -1.1508
44 P A -0.5479
45 V A 0.0988
46 Q A -1.3599
47 E A -1.8107
48 F A -0.5473
49 T A -0.1379
50 V A 0.4175
51 P A 0.4174
52 G A 0.6974
53 Y A 1.0271
54 S A 0.5041
55 S A -0.0066
56 T A 0.0624
57 A A 0.0000
58 T A 0.0569
59 I A 0.0000
60 S A -0.4418
61 G A -0.6674
62 L A 0.0000
63 S A -0.9231
64 P A -0.9018
65 G A -0.9422
66 V A -1.0090
67 D A -1.8736
68 Y A 0.0000
69 T A -0.9810
70 I A 0.0000
71 T A -0.0935
72 V A 0.0000
73 Y A 0.1034
74 A A 0.0000
75 Y A -0.3476
76 Y A 0.0000
77 D A -1.4285
78 N A -1.6412
79 Y A -1.0246
80 G A -0.6767
81 W A 0.0000
82 S A -0.2479
83 P A -0.1418
84 I A -0.0044
85 S A -0.4412
86 I A -0.6204
87 N A -1.7706
88 Y A -1.4560
89 R A -2.3124
90 T A -1.1111
2 S B -0.2638
3 S B -0.3908
4 V B 0.0000
5 P B 0.0000
6 T B -1.3832
7 K B -2.3665
8 L B 0.0000
9 E B -1.7212
10 V B 0.1497
11 V B 1.5212
12 A B 0.8882
13 A B 0.2850
14 T B -0.2042
15 P B -0.8182
16 T B -0.7243
17 S B -0.3229
18 L B 0.0000
19 L B 0.7321
20 I B 0.0000
21 S B -0.5508
22 W B 0.0000
23 D B -1.3339
24 A B -0.2572
25 G B -0.1037
26 Y B 1.0235
27 W B 0.4046
28 F B 0.0000
29 I B 0.0000
30 D B -0.3798
31 Y B 0.5076
32 Y B 0.0000
33 R B -0.3637
34 I B 0.0000
35 T B 0.0000
36 Y B -0.4126
37 G B -0.8516
38 E B -1.6366
39 T B -1.1967
40 G B -1.2938
41 G B -1.4171
42 N B -1.6001
43 S B -0.9489
44 P B -0.4612
45 V B 0.1760
46 Q B -1.2731
47 E B -1.7869
48 F B -0.6365
49 T B -0.0765
50 V B 0.4062
51 P B 0.3285
52 G B 0.5094
53 Y B 1.1158
54 S B 0.5433
55 S B -0.0456
56 T B 0.0850
57 A B 0.0000
58 T B 0.0899
59 I B 0.0000
60 S B -0.4717
61 G B -0.6781
62 L B 0.0000
63 S B -0.8123
64 P B -0.9308
65 G B -1.0337
66 V B -0.8285
67 D B -1.6896
68 Y B 0.0000
69 T B -0.7406
70 I B 0.0000
71 T B -0.0796
72 V B 0.0000
73 Y B 0.1436
74 A B 0.0000
75 Y B -0.3845
76 Y B 0.0000
77 D B -1.5932
78 N B -1.6572
79 Y B -0.8705
80 G B -0.5715
81 W B 0.0000
82 S B -0.2266
83 P B -0.1289
84 I B -0.0300
85 S B -0.4868
86 I B -0.5867
87 N B -1.5265
88 Y B -1.3207
89 R B -2.2439
90 T B -1.1660
20 E C -1.9311
21 Y C -1.5201
22 I C 0.0000
23 K C -1.9472
24 L C 0.0000
25 K C -0.8600
26 V C 0.0000
27 I C -0.5182
28 G C 0.0000
29 Q C -2.3754
30 D C -2.4766
31 S C -1.6509
32 S C -0.8826
33 E C -0.3101
34 I C 0.4007
35 H C 0.0140
36 F C 0.0000
37 K C -1.1321
38 V C 0.0000
39 K C -1.7352
40 M C -1.9783
41 T C -1.5042
42 T C -1.6064
43 H C -2.7158
44 L C 0.0000
45 K C -2.8163
46 K C -2.5919
47 L C 0.0000
48 K C 0.0000
49 E C -2.5440
50 S C 0.0000
51 Y C 0.0000
52 A C 0.0000
53 Q C -2.2812
54 R C -1.8083
55 Q C -2.0936
56 G C -1.4459
57 V C -0.8749
58 P C -0.9369
59 M C -1.2636
60 N C -1.6929
61 S C -1.1978
62 L C -1.2074
63 R C -1.7529
64 F C 0.0000
65 L C 0.0000
66 F C 0.0000
67 E C -2.7091
68 G C -2.4414
69 Q C -3.0130
70 R C -3.0264
71 I C 0.0000
72 A C -1.7543
73 D C -2.4638
74 N C -2.5340
75 H C -2.3285
76 T C -2.2809
77 P C 0.0000
78 K C -3.1115
79 E C -2.9167
80 L C -1.7765
81 G C -1.9355
82 M C 0.0000
83 E C -3.5015
84 E C -3.6840
85 E C -3.4053
86 D C -2.5712
87 V C -1.0295
88 I C 0.0000
89 E C -1.4151
90 V C 0.0000
91 Y C -1.3739
92 Q C -2.0027
93 E C -1.8931
94 Q C -1.8661
20 E D -1.8804
21 Y D -1.5149
22 I D 0.0000
23 K D -1.9387
24 L D 0.0000
25 K D -0.6731
26 V D 0.0000
27 I D -0.4872
28 G D 0.0000
29 Q D -2.2704
30 D D -2.5226
31 S D -1.6038
32 S D -1.1150
33 E D -0.4677
34 I D 0.0000
35 H D 0.0000
36 F D 0.0000
37 K D -1.1732
38 V D 0.0000
39 K D -1.6235
40 M D -1.8922
41 T D -1.4017
42 T D -1.5139
43 H D -2.7129
44 L D 0.0000
45 K D -3.5089
46 K D -2.5835
47 L D 0.0000
48 K D -2.4718
49 E D -3.2360
50 S D 0.0000
51 Y D 0.0000
52 A D 0.0000
53 Q D -2.7866
54 R D -2.6757
55 Q D -1.8956
56 G D -1.3904
57 V D -1.0367
58 P D -1.0257
59 M D -1.2717
60 N D -1.6498
61 S D -1.3733
62 L D 0.0000
63 R D -1.5099
64 F D 0.0000
65 L D -1.2514
66 F D 0.0000
67 E D -2.4534
68 G D -2.0507
69 Q D -2.1288
70 R D -2.0834
71 I D 0.0000
72 A D -2.0791
73 D D -3.5919
74 N D -2.9904
75 H D -2.5342
76 T D -2.3926
77 P D 0.0000
78 K D -3.0930
79 E D -2.9292
80 L D -2.0789
81 G D -2.0979
82 M D 0.0000
83 E D -3.4860
84 E D -3.6110
85 E D -3.2652
86 D D -2.3529
87 V D -0.6448
88 I D 0.0000
89 E D -1.0637
90 V D 0.0000
91 Y D -1.0811
92 Q D -1.8471
93 E D -1.6642
94 Q D -2.0146
95 T D -1.4214
96 G D -0.9814
97 G D -0.9233
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Laboratory of Theory of Biopolymers 2018