| Chain sequence(s) |
A: DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9940 | |
| 2 | C | A | -0.4593 | |
| 3 | L | A | -0.3213 | |
| 4 | S | A | 0.0000 | |
| 5 | G | A | -1.2937 | |
| 6 | R | A | -2.3952 | |
| 7 | Y | A | -1.3796 | |
| 8 | K | A | -2.2837 | |
| 9 | G | A | -1.4417 | |
| 10 | P | A | -0.6673 | |
| 11 | C | A | 0.0000 | |
| 12 | A | A | 0.3359 | |
| 13 | V | A | 1.0320 | |
| 14 | W | A | 0.7018 | |
| 15 | D | A | -1.1308 | |
| 16 | N | A | -2.0745 | |
| 17 | E | A | -3.2387 | |
| 18 | T | A | -2.3370 | |
| 19 | C | A | 0.0000 | |
| 20 | R | A | -4.2150 | |
| 21 | R | A | -4.1707 | |
| 22 | V | A | -3.0366 | |
| 23 | C | A | 0.0000 | |
| 24 | K | A | -4.1807 | |
| 25 | E | A | -3.8429 | |
| 26 | E | A | -2.8254 | |
| 27 | G | A | -2.4361 | |
| 28 | R | A | -2.7202 | |
| 29 | S | A | -2.2750 | |
| 30 | S | A | -3.0429 | |
| 31 | G | A | 0.0000 | |
| 32 | H | A | -1.8602 | |
| 33 | C | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | P | A | -0.0851 | |
| 36 | S | A | -0.1377 | |
| 37 | L | A | 0.0945 | |
| 38 | K | A | -0.7755 | |
| 39 | C | A | 0.0000 | |
| 40 | W | A | -0.6760 | |
| 41 | C | A | 0.0000 | |
| 42 | E | A | -2.9336 | |
| 43 | G | A | -1.6233 | |
| 44 | C | A | -0.4687 |