| Chain sequence(s) |
A: DVQLQESGGGLVRPGGSLRLSCAASGFLFSGTYMTWARQAPGKGLEWLCGINKDGSGTLYADSVEGRFTCSRDNAKNTLYLQMNSLKSEDTALYYCSTGALLPTRPQGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.4864 | |
| 2 | V | A | 0.1011 | |
| 3 | Q | A | -1.4266 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.8811 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.2151 | |
| 8 | G | A | -1.1853 | |
| 9 | G | A | -0.8419 | |
| 10 | G | A | -0.0599 | |
| 11 | L | A | 0.8973 | |
| 12 | V | A | -0.3592 | |
| 13 | R | A | -1.9706 | |
| 14 | P | A | -1.9665 | |
| 15 | G | A | -1.7007 | |
| 16 | G | A | -1.2644 | |
| 17 | S | A | -1.6413 | |
| 18 | L | A | -1.1424 | |
| 19 | R | A | -2.3343 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8576 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1255 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6200 | |
| 26 | G | A | -0.3945 | |
| 27 | F | A | 0.6111 | |
| 28 | L | A | 1.3131 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.1931 | |
| 31 | G | A | -0.7539 | |
| 32 | T | A | -0.4219 | |
| 33 | Y | A | -0.4758 | |
| 34 | M | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | A | A | 0.1540 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.1446 | |
| 40 | A | A | -1.4955 | |
| 41 | P | A | -1.1629 | |
| 42 | G | A | -1.5488 | |
| 43 | K | A | -2.3186 | |
| 44 | G | A | -1.4628 | |
| 45 | L | A | -0.6381 | |
| 46 | E | A | -0.3843 | |
| 47 | W | A | 0.3610 | |
| 48 | L | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -1.4017 | |
| 53 | K | A | -2.1030 | |
| 54 | D | A | -2.7876 | |
| 55 | G | A | -1.8396 | |
| 56 | S | A | -1.2257 | |
| 57 | G | A | -0.6291 | |
| 58 | T | A | 0.3071 | |
| 59 | L | A | 0.9038 | |
| 60 | Y | A | -0.1874 | |
| 61 | A | A | -1.0337 | |
| 62 | D | A | -2.2867 | |
| 63 | S | A | -1.5765 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.5576 | |
| 66 | G | A | -1.9600 | |
| 67 | R | A | -1.7577 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9778 | |
| 70 | C | A | 0.0000 | |
| 71 | S | A | -0.4521 | |
| 72 | R | A | -1.3578 | |
| 73 | D | A | -1.7063 | |
| 74 | N | A | -1.9728 | |
| 75 | A | A | -1.4145 | |
| 76 | K | A | -2.2860 | |
| 77 | N | A | -1.5055 | |
| 78 | T | A | -1.3041 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6180 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6969 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -2.2351 | |
| 85 | S | A | -1.6570 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.6436 | |
| 88 | S | A | -2.1163 | |
| 89 | E | A | -2.3838 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9926 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | -0.4877 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.7524 | |
| 96 | C | A | 0.0000 | |
| 97 | S | A | -0.4137 | |
| 98 | T | A | -0.0122 | |
| 99 | G | A | 0.3405 | |
| 100 | A | A | 1.1462 | |
| 101 | L | A | 2.2462 | |
| 102 | L | A | 1.9215 | |
| 103 | P | A | 0.3690 | |
| 104 | T | A | -0.4307 | |
| 105 | R | A | -1.8284 | |
| 106 | P | A | -1.4535 | |
| 107 | Q | A | -1.3665 | |
| 108 | G | A | -1.5374 | |
| 109 | Q | A | -1.7029 | |
| 110 | G | A | -1.2134 | |
| 111 | T | A | 0.0000 | |
| 112 | Q | A | -1.2237 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -0.4442 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | -0.9164 | |
| 117 | S | A | -0.7577 |