Project name: query_structure

Status: done

Started: 2026-03-16 23:04:31
Settings
Chain sequence(s) A: DVQLQESGGGLVRPGGSLRLSCAASGFLFSGTYMTWARQAPGKGLEWLCGINKDGSGTLYADSVEGRFTCSRDNAKNTLYLQMNSLKSEDTALYYCSTGALLPTRPQGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-2.7876
Maximal score value
2.2462
Average score
-0.7608
Total score value
-89.009

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.4864
2 V A 0.1011
3 Q A -1.4266
4 L A 0.0000
5 Q A -1.8811
6 E A 0.0000
7 S A -1.2151
8 G A -1.1853
9 G A -0.8419
10 G A -0.0599
11 L A 0.8973
12 V A -0.3592
13 R A -1.9706
14 P A -1.9665
15 G A -1.7007
16 G A -1.2644
17 S A -1.6413
18 L A -1.1424
19 R A -2.3343
20 L A 0.0000
21 S A -0.8576
22 C A 0.0000
23 A A -1.1255
24 A A 0.0000
25 S A -0.6200
26 G A -0.3945
27 F A 0.6111
28 L A 1.3131
29 F A 0.0000
30 S A -1.1931
31 G A -0.7539
32 T A -0.4219
33 Y A -0.4758
34 M A 0.0000
35 T A 0.0000
36 W A 0.0000
37 A A 0.1540
38 R A 0.0000
39 Q A -1.1446
40 A A -1.4955
41 P A -1.1629
42 G A -1.5488
43 K A -2.3186
44 G A -1.4628
45 L A -0.6381
46 E A -0.3843
47 W A 0.3610
48 L A 0.0000
49 C A 0.0000
50 G A 0.0000
51 I A 0.0000
52 N A -1.4017
53 K A -2.1030
54 D A -2.7876
55 G A -1.8396
56 S A -1.2257
57 G A -0.6291
58 T A 0.3071
59 L A 0.9038
60 Y A -0.1874
61 A A -1.0337
62 D A -2.2867
63 S A -1.5765
64 V A 0.0000
65 E A -2.5576
66 G A -1.9600
67 R A -1.7577
68 F A 0.0000
69 T A -0.9778
70 C A 0.0000
71 S A -0.4521
72 R A -1.3578
73 D A -1.7063
74 N A -1.9728
75 A A -1.4145
76 K A -2.2860
77 N A -1.5055
78 T A -1.3041
79 L A 0.0000
80 Y A -0.6180
81 L A 0.0000
82 Q A -1.6969
83 M A 0.0000
84 N A -2.2351
85 S A -1.6570
86 L A 0.0000
87 K A -2.6436
88 S A -2.1163
89 E A -2.3838
90 D A 0.0000
91 T A -0.9926
92 A A 0.0000
93 L A -0.4877
94 Y A 0.0000
95 Y A -0.7524
96 C A 0.0000
97 S A -0.4137
98 T A -0.0122
99 G A 0.3405
100 A A 1.1462
101 L A 2.2462
102 L A 1.9215
103 P A 0.3690
104 T A -0.4307
105 R A -1.8284
106 P A -1.4535
107 Q A -1.3665
108 G A -1.5374
109 Q A -1.7029
110 G A -1.2134
111 T A 0.0000
112 Q A -1.2237
113 V A 0.0000
114 T A -0.4442
115 V A 0.0000
116 S A -0.9164
117 S A -0.7577
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018