| Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
C: GIVEQCCTSICSLYQLENYCN B: FVNQHLCGSHLVEALYLVCGERGFFYTPKT E: GIVEQCCTSICSLYQLENYCN D: FVNQHLCGSHLVEALYLVCGERGFFYTPK G: GIVEQCCTSICSLYQLENYCN F: FVNQHLCGSHLVEALYLVCGERGFFYTPK I: GIVEQCCTSICSLYQLENYCN H: FVNQHLCGSHLVEALYLVCGERGFFYTP K: GIVEQCCTSICSLYQLENYCN J: FVNQHLCGSHLVEALYLVCGERGFFYTPKT L: FVNQHLCGSHLVEALYLVCGERGFFYTPKT input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:16)
[INFO] Main: Simulation completed successfully. (00:03:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5313 | |
| 2 | I | A | 0.0000 | |
| 3 | V | A | -1.6133 | |
| 4 | E | A | -2.4718 | |
| 5 | Q | A | -1.5495 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.7856 | |
| 8 | T | A | -0.5411 | |
| 9 | S | A | 0.2945 | |
| 10 | I | A | 1.6026 | |
| 11 | C | A | 0.9125 | |
| 12 | S | A | 0.6901 | |
| 13 | L | A | 0.5738 | |
| 14 | Y | A | 0.5954 | |
| 15 | Q | A | -0.1618 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -1.5267 | |
| 18 | N | A | -1.7082 | |
| 19 | Y | A | -0.7407 | |
| 20 | C | A | -1.3881 | |
| 21 | N | A | -1.6570 | |
| 1 | F | B | 1.4065 | |
| 2 | V | B | 0.0000 | |
| 3 | N | B | -1.3706 | |
| 4 | Q | B | -1.3165 | |
| 5 | H | B | -0.3411 | |
| 6 | L | B | -0.3902 | |
| 7 | C | B | 0.0000 | |
| 8 | G | B | 0.0000 | |
| 9 | S | B | -0.3604 | |
| 10 | H | B | -0.4969 | |
| 11 | L | B | 0.0000 | |
| 12 | V | B | 0.0000 | |
| 13 | E | B | -0.5407 | |
| 14 | A | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | Y | B | 0.0000 | |
| 17 | L | B | -0.2592 | |
| 18 | V | B | 0.0000 | |
| 19 | C | B | 0.0000 | |
| 20 | G | B | -1.3907 | |
| 21 | E | B | -2.9350 | |
| 22 | R | B | -2.6104 | |
| 23 | G | B | 0.0000 | |
| 24 | F | B | 0.0000 | |
| 25 | F | B | 1.1239 | |
| 26 | Y | B | 0.0000 | |
| 27 | T | B | -0.9495 | |
| 28 | P | B | -1.8092 | |
| 29 | K | B | -2.4960 | |
| 1 | G | C | -1.5351 | |
| 2 | I | C | 0.0000 | |
| 3 | V | C | -1.5386 | |
| 4 | E | C | -2.4485 | |
| 5 | Q | C | -1.9501 | |
| 6 | C | C | 0.0000 | |
| 7 | C | C | -0.7853 | |
| 8 | T | C | -0.6353 | |
| 9 | S | C | -0.0730 | |
| 10 | I | C | 0.4264 | |
| 11 | C | C | -0.0209 | |
| 12 | S | C | 0.1874 | |
| 13 | L | C | 0.3903 | |
| 14 | Y | C | 0.5410 | |
| 15 | Q | C | -0.6498 | |
| 16 | L | C | 0.0000 | |
| 17 | E | C | -1.4753 | |
| 18 | N | C | -1.7603 | |
| 19 | Y | C | -0.9961 | |
| 20 | C | C | 0.0000 | |
| 21 | N | C | -1.8690 | |
| 1 | F | D | 1.8039 | |
| 2 | V | D | 0.0000 | |
| 3 | N | D | -0.2882 | |
| 4 | Q | D | -0.3284 | |
| 5 | H | D | 0.1278 | |
| 6 | L | D | 0.0000 | |
| 7 | C | D | 0.0000 | |
| 8 | G | D | 0.0000 | |
| 9 | S | D | 0.0000 | |
| 10 | H | D | -0.3725 | |
| 11 | L | D | 0.0000 | |
| 12 | V | D | 0.0000 | |
| 13 | E | D | -0.2336 | |
| 14 | A | D | 0.0000 | |
| 15 | L | D | 0.0000 | |
| 16 | Y | D | -0.2551 | |
| 17 | L | D | 0.0092 | |
| 18 | V | D | -0.0972 | |
| 19 | C | D | 0.0000 | |
| 20 | G | D | -1.5786 | |
| 21 | E | D | -2.9497 | |
| 22 | R | D | -2.6168 | |
| 23 | G | D | 0.0000 | |
| 24 | F | D | 0.0000 | |
| 25 | F | D | 0.7164 | |
| 26 | Y | D | 0.0000 | |
| 27 | T | D | -1.0563 | |
| 28 | P | D | -1.8747 | |
| 29 | K | D | -2.5027 | |
| 1 | G | E | -1.6726 | |
| 2 | I | E | 0.0000 | |
| 3 | V | E | -1.7434 | |
| 4 | E | E | -2.5087 | |
| 5 | Q | E | -1.8484 | |
| 6 | C | E | 0.0000 | |
| 7 | C | E | 0.0000 | |
| 8 | T | E | -0.2851 | |
| 9 | S | E | 0.4506 | |
| 10 | I | E | 1.5973 | |
| 11 | C | E | 0.7382 | |
| 12 | S | E | 0.6173 | |
| 13 | L | E | 0.6250 | |
| 14 | Y | E | 0.5438 | |
| 15 | Q | E | -0.5106 | |
| 16 | L | E | 0.0000 | |
| 17 | E | E | -1.4743 | |
| 18 | N | E | -1.6153 | |
| 19 | Y | E | -0.6875 | |
| 20 | C | E | -1.4655 | |
| 21 | N | E | -1.8600 | |
| 2 | V | F | -0.0190 | |
| 3 | N | F | -1.3098 | |
| 4 | Q | F | -1.4925 | |
| 5 | H | F | -0.6463 | |
| 6 | L | F | 0.0000 | |
| 7 | C | F | 0.0000 | |
| 8 | G | F | 0.0000 | |
| 9 | S | F | -0.5053 | |
| 10 | H | F | -0.4221 | |
| 11 | L | F | 0.0000 | |
| 12 | V | F | 0.0000 | |
| 13 | E | F | -0.3891 | |
| 14 | A | F | -0.1166 | |
| 15 | L | F | 0.0000 | |
| 16 | Y | F | 0.0000 | |
| 17 | L | F | -0.1119 | |
| 18 | V | F | -0.2528 | |
| 19 | C | F | 0.0000 | |
| 20 | G | F | -1.4329 | |
| 21 | E | F | -2.6808 | |
| 22 | R | F | -2.4964 | |
| 23 | G | F | 0.0000 | |
| 24 | F | F | 0.0000 | |
| 25 | F | F | 0.5589 | |
| 26 | Y | F | 0.0000 | |
| 27 | T | F | -1.0680 | |
| 28 | P | F | -1.8824 | |
| 29 | K | F | -2.6065 | |
| 1 | G | G | -1.4595 | |
| 2 | I | G | 0.0000 | |
| 3 | V | G | -1.5412 | |
| 4 | E | G | -2.6491 | |
| 5 | Q | G | -2.1032 | |
| 6 | C | G | 0.0000 | |
| 7 | C | G | -0.6857 | |
| 8 | T | G | -0.5458 | |
| 9 | S | G | 0.2252 | |
| 10 | I | G | 1.0287 | |
| 11 | C | G | 0.2564 | |
| 12 | S | G | 0.3804 | |
| 13 | L | G | 0.4560 | |
| 14 | Y | G | 0.5464 | |
| 15 | Q | G | -0.6379 | |
| 16 | L | G | 0.0000 | |
| 17 | E | G | -1.3811 | |
| 18 | N | G | -1.7448 | |
| 19 | Y | G | -0.9007 | |
| 20 | C | G | -1.5358 | |
| 21 | N | G | -1.9164 | |
| 1 | F | H | 1.7780 | |
| 2 | V | H | 0.0000 | |
| 3 | N | H | -0.2882 | |
| 4 | Q | H | -0.6482 | |
| 5 | H | H | -0.2756 | |
| 6 | L | H | 0.0000 | |
| 7 | C | H | 0.0000 | |
| 8 | G | H | 0.0000 | |
| 9 | S | H | 0.0000 | |
| 10 | H | H | -0.4933 | |
| 11 | L | H | 0.0000 | |
| 12 | V | H | 0.0000 | |
| 13 | E | H | -0.7103 | |
| 14 | A | H | 0.0000 | |
| 15 | L | H | 0.0000 | |
| 16 | Y | H | -0.4740 | |
| 17 | L | H | -0.1731 | |
| 18 | V | H | 0.0000 | |
| 19 | C | H | 0.0000 | |
| 20 | G | H | -1.7683 | |
| 21 | E | H | -3.1260 | |
| 22 | R | H | -2.8570 | |
| 23 | G | H | 0.0000 | |
| 24 | F | H | 0.0000 | |
| 25 | F | H | 0.6080 | |
| 26 | Y | H | 0.0000 | |
| 27 | T | H | -0.7278 | |
| 28 | P | H | -1.3570 | |
| 1 | G | I | -1.6249 | |
| 2 | I | I | 0.0000 | |
| 3 | V | I | -1.6102 | |
| 4 | E | I | -2.6171 | |
| 5 | Q | I | -1.5897 | |
| 6 | C | I | 0.0000 | |
| 7 | C | I | -0.6824 | |
| 8 | T | I | -0.2424 | |
| 9 | S | I | 0.4314 | |
| 10 | I | I | 1.2526 | |
| 11 | C | I | 0.0000 | |
| 12 | S | I | 0.5508 | |
| 13 | L | I | 0.6900 | |
| 14 | Y | I | 0.6419 | |
| 15 | Q | I | -0.3930 | |
| 16 | L | I | 0.0000 | |
| 17 | E | I | -1.4725 | |
| 18 | N | I | -1.6523 | |
| 19 | Y | I | -0.9049 | |
| 20 | C | I | -1.2627 | |
| 21 | N | I | -1.5593 | |
| 1 | F | J | 0.3770 | |
| 2 | V | J | 0.0000 | |
| 3 | N | J | -1.6529 | |
| 4 | Q | J | -1.6887 | |
| 5 | H | J | -0.8911 | |
| 6 | L | J | 0.0000 | |
| 7 | C | J | 0.0000 | |
| 8 | G | J | 0.0000 | |
| 9 | S | J | 0.0000 | |
| 10 | H | J | -0.2557 | |
| 11 | L | J | 0.0000 | |
| 12 | V | J | 0.0000 | |
| 13 | E | J | -0.3328 | |
| 14 | A | J | 0.0000 | |
| 15 | L | J | 0.0000 | |
| 16 | Y | J | 0.0000 | |
| 17 | L | J | -0.0225 | |
| 18 | V | J | 0.0000 | |
| 19 | C | J | 0.0000 | |
| 20 | G | J | -1.3662 | |
| 21 | E | J | -2.7520 | |
| 22 | R | J | -2.3203 | |
| 23 | G | J | 0.0000 | |
| 24 | F | J | 0.0000 | |
| 25 | F | J | 1.0344 | |
| 26 | Y | J | 0.0000 | |
| 27 | T | J | -0.9677 | |
| 28 | P | J | -1.9927 | |
| 29 | K | J | -2.5555 | |
| 1 | G | K | -1.7563 | |
| 2 | I | K | 0.0000 | |
| 3 | V | K | -1.6940 | |
| 4 | E | K | -2.8135 | |
| 5 | Q | K | -2.0217 | |
| 6 | C | K | 0.0000 | |
| 7 | C | K | -0.7265 | |
| 8 | T | K | -0.2849 | |
| 9 | S | K | 0.4535 | |
| 10 | I | K | 1.1941 | |
| 11 | C | K | 0.3390 | |
| 12 | S | K | 0.3952 | |
| 13 | L | K | 0.4639 | |
| 14 | Y | K | 0.5758 | |
| 15 | Q | K | -0.5139 | |
| 16 | L | K | 0.0000 | |
| 17 | E | K | -1.1888 | |
| 18 | N | K | -1.5790 | |
| 19 | Y | K | -0.4373 | |
| 20 | C | K | -1.0702 | |
| 21 | N | K | -1.5199 | |
| 1 | F | L | 1.3395 | |
| 2 | V | L | 0.1815 | |
| 3 | N | L | -1.1226 | |
| 4 | Q | L | -1.1598 | |
| 5 | H | L | -0.5960 | |
| 6 | L | L | 0.0000 | |
| 7 | C | L | 0.0000 | |
| 8 | G | L | 0.0000 | |
| 9 | S | L | 0.0000 | |
| 10 | H | L | -0.3294 | |
| 11 | L | L | 0.0000 | |
| 12 | V | L | 0.0000 | |
| 13 | E | L | -0.3737 | |
| 14 | A | L | 0.0000 | |
| 15 | L | L | 0.0000 | |
| 16 | Y | L | -0.3601 | |
| 17 | L | L | -0.0990 | |
| 18 | V | L | 0.0000 | |
| 19 | C | L | 0.0000 | |
| 20 | G | L | -1.4630 | |
| 21 | E | L | -2.8546 | |
| 22 | R | L | -2.5246 | |
| 23 | G | L | 0.0000 | |
| 24 | F | L | 0.0000 | |
| 25 | F | L | 1.8694 | |
| 26 | Y | L | 0.0000 | |
| 27 | T | L | -0.7568 | |
| 28 | P | L | -1.7042 | |
| 29 | K | L | -2.5193 |