Project name: e6a2212d092beee

Status: done

Started: 2026-07-21 06:22:36
Settings
Chain sequence(s) A: GIVEQCCTSICSLYQLENYCN
C: GIVEQCCTSICSLYQLENYCN
B: FVNQHLCGSHLVEALYLVCGERGFFYTPKT
E: GIVEQCCTSICSLYQLENYCN
D: FVNQHLCGSHLVEALYLVCGERGFFYTPK
G: GIVEQCCTSICSLYQLENYCN
F: FVNQHLCGSHLVEALYLVCGERGFFYTPK
I: GIVEQCCTSICSLYQLENYCN
H: FVNQHLCGSHLVEALYLVCGERGFFYTP
K: GIVEQCCTSICSLYQLENYCN
J: FVNQHLCGSHLVEALYLVCGERGFFYTPKT
L: FVNQHLCGSHLVEALYLVCGERGFFYTPKT
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:19)
Show buried residues

Minimal score value
-3.126
Maximal score value
1.8694
Average score
-0.5242
Total score value
-156.2131

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.5313
2 I A 0.0000
3 V A -1.6133
4 E A -2.4718
5 Q A -1.5495
6 C A 0.0000
7 C A -0.7856
8 T A -0.5411
9 S A 0.2945
10 I A 1.6026
11 C A 0.9125
12 S A 0.6901
13 L A 0.5738
14 Y A 0.5954
15 Q A -0.1618
16 L A 0.0000
17 E A -1.5267
18 N A -1.7082
19 Y A -0.7407
20 C A -1.3881
21 N A -1.6570
1 F B 1.4065
2 V B 0.0000
3 N B -1.3706
4 Q B -1.3165
5 H B -0.3411
6 L B -0.3902
7 C B 0.0000
8 G B 0.0000
9 S B -0.3604
10 H B -0.4969
11 L B 0.0000
12 V B 0.0000
13 E B -0.5407
14 A B 0.0000
15 L B 0.0000
16 Y B 0.0000
17 L B -0.2592
18 V B 0.0000
19 C B 0.0000
20 G B -1.3907
21 E B -2.9350
22 R B -2.6104
23 G B 0.0000
24 F B 0.0000
25 F B 1.1239
26 Y B 0.0000
27 T B -0.9495
28 P B -1.8092
29 K B -2.4960
1 G C -1.5351
2 I C 0.0000
3 V C -1.5386
4 E C -2.4485
5 Q C -1.9501
6 C C 0.0000
7 C C -0.7853
8 T C -0.6353
9 S C -0.0730
10 I C 0.4264
11 C C -0.0209
12 S C 0.1874
13 L C 0.3903
14 Y C 0.5410
15 Q C -0.6498
16 L C 0.0000
17 E C -1.4753
18 N C -1.7603
19 Y C -0.9961
20 C C 0.0000
21 N C -1.8690
1 F D 1.8039
2 V D 0.0000
3 N D -0.2882
4 Q D -0.3284
5 H D 0.1278
6 L D 0.0000
7 C D 0.0000
8 G D 0.0000
9 S D 0.0000
10 H D -0.3725
11 L D 0.0000
12 V D 0.0000
13 E D -0.2336
14 A D 0.0000
15 L D 0.0000
16 Y D -0.2551
17 L D 0.0092
18 V D -0.0972
19 C D 0.0000
20 G D -1.5786
21 E D -2.9497
22 R D -2.6168
23 G D 0.0000
24 F D 0.0000
25 F D 0.7164
26 Y D 0.0000
27 T D -1.0563
28 P D -1.8747
29 K D -2.5027
1 G E -1.6726
2 I E 0.0000
3 V E -1.7434
4 E E -2.5087
5 Q E -1.8484
6 C E 0.0000
7 C E 0.0000
8 T E -0.2851
9 S E 0.4506
10 I E 1.5973
11 C E 0.7382
12 S E 0.6173
13 L E 0.6250
14 Y E 0.5438
15 Q E -0.5106
16 L E 0.0000
17 E E -1.4743
18 N E -1.6153
19 Y E -0.6875
20 C E -1.4655
21 N E -1.8600
2 V F -0.0190
3 N F -1.3098
4 Q F -1.4925
5 H F -0.6463
6 L F 0.0000
7 C F 0.0000
8 G F 0.0000
9 S F -0.5053
10 H F -0.4221
11 L F 0.0000
12 V F 0.0000
13 E F -0.3891
14 A F -0.1166
15 L F 0.0000
16 Y F 0.0000
17 L F -0.1119
18 V F -0.2528
19 C F 0.0000
20 G F -1.4329
21 E F -2.6808
22 R F -2.4964
23 G F 0.0000
24 F F 0.0000
25 F F 0.5589
26 Y F 0.0000
27 T F -1.0680
28 P F -1.8824
29 K F -2.6065
1 G G -1.4595
2 I G 0.0000
3 V G -1.5412
4 E G -2.6491
5 Q G -2.1032
6 C G 0.0000
7 C G -0.6857
8 T G -0.5458
9 S G 0.2252
10 I G 1.0287
11 C G 0.2564
12 S G 0.3804
13 L G 0.4560
14 Y G 0.5464
15 Q G -0.6379
16 L G 0.0000
17 E G -1.3811
18 N G -1.7448
19 Y G -0.9007
20 C G -1.5358
21 N G -1.9164
1 F H 1.7780
2 V H 0.0000
3 N H -0.2882
4 Q H -0.6482
5 H H -0.2756
6 L H 0.0000
7 C H 0.0000
8 G H 0.0000
9 S H 0.0000
10 H H -0.4933
11 L H 0.0000
12 V H 0.0000
13 E H -0.7103
14 A H 0.0000
15 L H 0.0000
16 Y H -0.4740
17 L H -0.1731
18 V H 0.0000
19 C H 0.0000
20 G H -1.7683
21 E H -3.1260
22 R H -2.8570
23 G H 0.0000
24 F H 0.0000
25 F H 0.6080
26 Y H 0.0000
27 T H -0.7278
28 P H -1.3570
1 G I -1.6249
2 I I 0.0000
3 V I -1.6102
4 E I -2.6171
5 Q I -1.5897
6 C I 0.0000
7 C I -0.6824
8 T I -0.2424
9 S I 0.4314
10 I I 1.2526
11 C I 0.0000
12 S I 0.5508
13 L I 0.6900
14 Y I 0.6419
15 Q I -0.3930
16 L I 0.0000
17 E I -1.4725
18 N I -1.6523
19 Y I -0.9049
20 C I -1.2627
21 N I -1.5593
1 F J 0.3770
2 V J 0.0000
3 N J -1.6529
4 Q J -1.6887
5 H J -0.8911
6 L J 0.0000
7 C J 0.0000
8 G J 0.0000
9 S J 0.0000
10 H J -0.2557
11 L J 0.0000
12 V J 0.0000
13 E J -0.3328
14 A J 0.0000
15 L J 0.0000
16 Y J 0.0000
17 L J -0.0225
18 V J 0.0000
19 C J 0.0000
20 G J -1.3662
21 E J -2.7520
22 R J -2.3203
23 G J 0.0000
24 F J 0.0000
25 F J 1.0344
26 Y J 0.0000
27 T J -0.9677
28 P J -1.9927
29 K J -2.5555
1 G K -1.7563
2 I K 0.0000
3 V K -1.6940
4 E K -2.8135
5 Q K -2.0217
6 C K 0.0000
7 C K -0.7265
8 T K -0.2849
9 S K 0.4535
10 I K 1.1941
11 C K 0.3390
12 S K 0.3952
13 L K 0.4639
14 Y K 0.5758
15 Q K -0.5139
16 L K 0.0000
17 E K -1.1888
18 N K -1.5790
19 Y K -0.4373
20 C K -1.0702
21 N K -1.5199
1 F L 1.3395
2 V L 0.1815
3 N L -1.1226
4 Q L -1.1598
5 H L -0.5960
6 L L 0.0000
7 C L 0.0000
8 G L 0.0000
9 S L 0.0000
10 H L -0.3294
11 L L 0.0000
12 V L 0.0000
13 E L -0.3737
14 A L 0.0000
15 L L 0.0000
16 Y L -0.3601
17 L L -0.0990
18 V L 0.0000
19 C L 0.0000
20 G L -1.4630
21 E L -2.8546
22 R L -2.5246
23 G L 0.0000
24 F L 0.0000
25 F L 1.8694
26 Y L 0.0000
27 T L -0.7568
28 P L -1.7042
29 K L -2.5193
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018