| Chain sequence(s) |
A: FQFGHGFQF
C: FQFGHGFQF B: FQFGHGFQF E: FQFGHGFQF D: FQFGHGFQF G: FQFGHGFQF F: FQFGHGFQF H: FQFGHGFQF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:54)
[INFO] Main: Simulation completed successfully. (00:01:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.5008 | |
| 2 | Q | A | 0.8714 | |
| 3 | F | A | 2.0331 | |
| 4 | G | A | 0.5768 | |
| 5 | H | A | 0.0552 | |
| 6 | G | A | 0.0000 | |
| 7 | F | A | 2.1502 | |
| 8 | Q | A | 2.5135 | |
| 9 | F | A | 3.8335 | |
| 1 | F | B | 3.4801 | |
| 2 | Q | B | 1.6714 | |
| 3 | F | B | 1.8551 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 0.7530 | |
| 6 | G | B | 0.0000 | |
| 7 | F | B | 2.1912 | |
| 8 | Q | B | 2.6958 | |
| 9 | F | B | 2.6527 | |
| 1 | F | C | 4.2500 | |
| 2 | Q | C | 3.8808 | |
| 3 | F | C | 2.8712 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | 1.6420 | |
| 6 | G | C | 0.0000 | |
| 7 | F | C | 2.2888 | |
| 8 | Q | C | 1.4693 | |
| 9 | F | C | 2.5664 | |
| 1 | F | D | 2.8983 | |
| 2 | Q | D | 1.9136 | |
| 3 | F | D | 2.5573 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 0.0000 | |
| 6 | G | D | 0.0000 | |
| 7 | F | D | 3.2124 | |
| 8 | Q | D | 3.1641 | |
| 9 | F | D | 3.3085 | |
| 1 | F | E | 4.7468 | |
| 2 | Q | E | 0.0000 | |
| 3 | F | E | 2.8558 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | 0.1188 | |
| 6 | G | E | 0.7647 | |
| 7 | F | E | 1.3663 | |
| 8 | Q | E | 0.8902 | |
| 9 | F | E | 2.2545 | |
| 1 | F | F | 1.9333 | |
| 2 | Q | F | 0.0042 | |
| 3 | F | F | 0.0000 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | 0.0000 | |
| 6 | G | F | 0.0000 | |
| 7 | F | F | 2.7749 | |
| 8 | Q | F | 0.8028 | |
| 9 | F | F | 2.1861 | |
| 1 | F | G | 4.2501 | |
| 2 | Q | G | 0.0000 | |
| 3 | F | G | 2.3687 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | 0.5512 | |
| 6 | G | G | 0.0000 | |
| 7 | F | G | 0.0000 | |
| 8 | Q | G | 3.5323 | |
| 9 | F | G | 4.7845 | |
| 1 | F | H | 2.9068 | |
| 2 | Q | H | 1.2683 | |
| 3 | F | H | 2.7262 | |
| 4 | G | H | 1.1265 | |
| 5 | H | H | 0.1853 | |
| 6 | G | H | 0.9905 | |
| 7 | F | H | 2.8448 | |
| 8 | Q | H | 0.0000 | |
| 9 | F | H | 4.1988 |