Project name: query_structure

Status: done

Started: 2026-03-16 23:47:03
Settings
Chain sequence(s) A: GVIPCGESCVFIPCISSVVGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-2.3163
Maximal score value
2.9457
Average score
0.536
Total score value
16.6159

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1245
2 V A 1.8579
3 I A 1.9601
4 P A 0.5542
5 C A 0.5062
6 G A -0.1104
7 E A 0.1809
8 S A 0.4920
9 C A 1.1519
10 V A 2.3745
11 F A 2.9457
12 I A 2.2779
13 P A 1.4103
14 C A 0.0000
15 I A 2.5542
16 S A 1.7684
17 S A 1.6190
18 V A 2.7864
19 V A 2.2811
20 G A 0.6023
21 C A 0.0000
22 S A -0.6108
23 C A -0.7238
24 K A -2.3163
25 N A -2.1920
26 K A -1.3798
27 V A -0.9123
28 C A 0.0000
29 Y A -0.4985
30 R A -0.7054
31 N A -1.1333
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Laboratory of Theory of Biopolymers 2018