| Chain sequence(s) |
H: HLAQSGGGVVQPGRSLTLSCAASGFTFASSDMHWIRQGPGKGLEWVAVISFTGETKNYADSVRGRFTISRDNSRSTLHLQMYGLRADDTAVYYCASGPHHSGSGTYYPSYLYGWGPGAPVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | H | H | -1.0027 | |
| 1 | L | H | 0.0000 | |
| 2 | A | H | -0.3794 | |
| 3 | Q | H | -0.4843 | |
| 4 | S | H | -0.6498 | |
| 5 | G | H | -0.6969 | |
| 6 | G | H | -0.2459 | |
| 7 | G | H | 0.5022 | |
| 8 | V | H | 1.5318 | |
| 9 | V | H | -0.0552 | |
| 10 | Q | H | -1.2742 | |
| 11 | P | H | -1.9889 | |
| 12 | G | H | -1.8688 | |
| 13 | R | H | -2.2618 | |
| 14 | S | H | -1.0172 | |
| 15 | L | H | -0.1043 | |
| 16 | T | H | -0.4015 | |
| 17 | L | H | 0.0000 | |
| 18 | S | H | -0.5507 | |
| 19 | C | H | 0.0000 | |
| 20 | A | H | -0.7381 | |
| 21 | A | H | -0.6391 | |
| 22 | S | H | -0.4818 | |
| 23 | G | H | -0.3489 | |
| 24 | F | H | 0.5589 | |
| 25 | T | H | 0.2011 | |
| 26 | F | H | 0.0000 | |
| 27 | A | H | -0.0827 | |
| 28 | S | H | 0.0360 | |
| 29 | S | H | 0.1415 | |
| 30 | D | H | 0.0000 | |
| 31 | M | H | 0.0000 | |
| 32 | H | H | 0.0000 | |
| 33 | W | H | 0.0000 | |
| 34 | I | H | 0.0000 | |
| 35 | R | H | 0.0000 | |
| 36 | Q | H | -0.5790 | |
| 37 | G | H | -1.2441 | |
| 38 | P | H | -1.0259 | |
| 39 | G | H | -1.4718 | |
| 40 | K | H | -2.1526 | |
| 41 | G | H | -1.0873 | |
| 42 | L | H | 0.4454 | |
| 43 | E | H | -0.3538 | |
| 44 | W | H | 0.3713 | |
| 45 | V | H | 0.0000 | |
| 46 | A | H | 0.0000 | |
| 47 | V | H | -0.1311 | |
| 48 | I | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | F | H | 0.2369 | |
| 51 | T | H | -0.6299 | |
| 52 | G | H | -1.2268 | |
| 53 | E | H | -1.9778 | |
| 54 | T | H | -1.3561 | |
| 55 | K | H | -1.4140 | |
| 56 | N | H | -1.4535 | |
| 57 | Y | H | -1.3880 | |
| 58 | A | H | -1.5436 | |
| 59 | D | H | -2.5503 | |
| 60 | S | H | -1.7722 | |
| 61 | V | H | 0.0000 | |
| 62 | R | H | -2.8201 | |
| 63 | G | H | -1.5429 | |
| 64 | R | H | -0.9113 | |
| 65 | F | H | 0.0000 | |
| 66 | T | H | -0.7784 | |
| 67 | I | H | 0.0000 | |
| 68 | S | H | -1.0839 | |
| 69 | R | H | -1.4137 | |
| 70 | D | H | -2.1919 | |
| 71 | N | H | -1.8410 | |
| 72 | S | H | -1.7908 | |
| 73 | R | H | -2.5330 | |
| 74 | S | H | -1.5209 | |
| 75 | T | H | -1.3487 | |
| 76 | L | H | 0.0000 | |
| 77 | H | H | -0.9246 | |
| 78 | L | H | 0.0000 | |
| 79 | Q | H | -0.7397 | |
| 80 | M | H | 0.0000 | |
| 81 | Y | H | 0.0661 | |
| 82 | G | H | -0.9295 | |
| 83 | L | H | 0.0000 | |
| 84 | R | H | -2.8155 | |
| 85 | A | H | -1.9290 | |
| 86 | D | H | -2.4166 | |
| 87 | D | H | 0.0000 | |
| 88 | T | H | -0.8015 | |
| 89 | A | H | 0.0000 | |
| 90 | V | H | 0.2658 | |
| 91 | Y | H | 0.0000 | |
| 92 | Y | H | 0.3081 | |
| 93 | C | H | 0.0000 | |
| 94 | A | H | 0.0000 | |
| 95 | S | H | 0.0000 | |
| 96 | G | H | 0.0000 | |
| 97 | P | H | 0.1649 | |
| 98 | H | H | -0.7876 | |
| 99 | H | H | -1.2299 | |
| 100 | S | H | -0.8611 | |
| 101 | G | H | -0.9080 | |
| 102 | S | H | -0.3529 | |
| 103 | G | H | -0.3143 | |
| 104 | T | H | 0.5298 | |
| 105 | Y | H | 1.1136 | |
| 106 | Y | H | 1.5380 | |
| 107 | P | H | 0.6693 | |
| 108 | S | H | 0.7213 | |
| 109 | Y | H | 1.4896 | |
| 110 | L | H | 1.5142 | |
| 111 | Y | H | 1.7421 | |
| 112 | G | H | 0.8663 | |
| 113 | W | H | 0.6018 | |
| 114 | G | H | -0.1664 | |
| 115 | P | H | -0.2866 | |
| 116 | G | H | -0.1708 | |
| 117 | A | H | 0.0000 | |
| 118 | P | H | -0.0830 | |
| 119 | V | H | 0.0000 | |
| 120 | T | H | 0.0461 | |
| 121 | V | H | 0.0000 | |
| 122 | S | H | -0.5459 | |
| 123 | S | H | -0.3059 |