Project name: query_structure

Status: done

Started: 2026-03-16 23:54:10
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Chain sequence(s) A: MADVQLVESGGGLVQAGGSLRLSCAASGRTFSTSAMGWFRQAPGKEREFVARITWSAGYTAYSDSVKGRFTISRDKAKNTVYLQMNSLKPEDTAVYYCASRSAGYSSSLTRREDYAYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:29)
Show buried residues

Minimal score value
-3.8663
Maximal score value
1.1669
Average score
-0.8196
Total score value
-104.0935

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4124
2 A A -0.7079
3 D A -1.8302
4 V A -1.1583
5 Q A -1.0701
6 L A 0.0000
7 V A 1.1669
8 E A 0.0000
9 S A -0.5332
10 G A -0.9888
11 G A -0.8089
12 G A -0.0598
13 L A 1.0249
14 V A 0.0043
15 Q A -1.2068
16 A A -1.4161
17 G A -1.3272
18 G A -0.8716
19 S A -1.2079
20 L A -1.0234
21 R A -2.1348
22 L A 0.0000
23 S A -0.3844
24 C A 0.0000
25 A A -0.0988
26 A A 0.0000
27 S A -1.1825
28 G A -1.5708
29 R A -2.1327
30 T A -1.1777
31 F A 0.0000
32 S A -0.9706
33 T A -0.3448
34 S A 0.0000
35 A A 0.0000
36 M A 0.0000
37 G A 0.0000
38 W A 0.0000
39 F A 0.0000
40 R A -1.6554
41 Q A -2.3694
42 A A -2.1822
43 P A -1.4362
44 G A -1.9480
45 K A -3.4842
46 E A -3.7531
47 R A -3.3631
48 E A -3.0090
49 F A -1.6718
50 V A 0.0000
51 A A 0.0000
52 R A 0.0827
53 I A 0.0000
54 T A 0.3322
55 W A 0.4045
56 S A -0.1101
57 A A -0.1958
58 G A -0.0835
59 Y A 0.4170
60 T A 0.1696
61 A A -0.1912
62 Y A -0.8484
63 S A -1.5050
64 D A -2.4073
65 S A -1.7351
66 V A 0.0000
67 K A -2.6132
68 G A -1.7736
69 R A -1.4862
70 F A 0.0000
71 T A -0.8738
72 I A 0.0000
73 S A -0.5700
74 R A -1.1809
75 D A -2.1392
76 K A -2.7059
77 A A -1.9790
78 K A -2.6886
79 N A -2.2677
80 T A 0.0000
81 V A 0.0000
82 Y A -0.6376
83 L A 0.0000
84 Q A -1.2484
85 M A 0.0000
86 N A -1.3901
87 S A -1.2080
88 L A 0.0000
89 K A -2.3831
90 P A -1.9446
91 E A -2.3721
92 D A 0.0000
93 T A -1.0052
94 A A 0.0000
95 V A -0.7054
96 Y A 0.0000
97 Y A -0.3528
98 C A 0.0000
99 A A 0.0000
100 S A 0.0000
101 R A 0.0000
102 S A 0.1230
103 A A -0.1580
104 G A -0.1303
105 Y A 0.5042
106 S A -0.0003
107 S A -0.1726
108 S A -0.4760
109 L A -0.5687
110 T A -1.5187
111 R A -3.3539
112 R A -3.8663
113 E A -3.4281
114 D A -2.0523
115 Y A -1.0761
116 A A -0.1869
117 Y A 0.4100
118 W A 0.4620
119 G A 0.0364
120 Q A -0.8159
121 G A 0.0000
122 T A 0.0000
123 Q A -1.0845
124 V A 0.0000
125 T A -0.3212
126 V A 0.0000
127 S A -0.7523
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Laboratory of Theory of Biopolymers 2018