| Chain sequence(s) |
A: MADVQLVESGGGLVQAGGSLRLSCAASGRTFSTSAMGWFRQAPGKEREFVARITWSAGYTAYSDSVKGRFTISRDKAKNTVYLQMNSLKPEDTAVYYCASRSAGYSSSLTRREDYAYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4124 | |
| 2 | A | A | -0.7079 | |
| 3 | D | A | -1.8302 | |
| 4 | V | A | -1.1583 | |
| 5 | Q | A | -1.0701 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.1669 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.5332 | |
| 10 | G | A | -0.9888 | |
| 11 | G | A | -0.8089 | |
| 12 | G | A | -0.0598 | |
| 13 | L | A | 1.0249 | |
| 14 | V | A | 0.0043 | |
| 15 | Q | A | -1.2068 | |
| 16 | A | A | -1.4161 | |
| 17 | G | A | -1.3272 | |
| 18 | G | A | -0.8716 | |
| 19 | S | A | -1.2079 | |
| 20 | L | A | -1.0234 | |
| 21 | R | A | -2.1348 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.3844 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.0988 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -1.1825 | |
| 28 | G | A | -1.5708 | |
| 29 | R | A | -2.1327 | |
| 30 | T | A | -1.1777 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -0.9706 | |
| 33 | T | A | -0.3448 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -1.6554 | |
| 41 | Q | A | -2.3694 | |
| 42 | A | A | -2.1822 | |
| 43 | P | A | -1.4362 | |
| 44 | G | A | -1.9480 | |
| 45 | K | A | -3.4842 | |
| 46 | E | A | -3.7531 | |
| 47 | R | A | -3.3631 | |
| 48 | E | A | -3.0090 | |
| 49 | F | A | -1.6718 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | R | A | 0.0827 | |
| 53 | I | A | 0.0000 | |
| 54 | T | A | 0.3322 | |
| 55 | W | A | 0.4045 | |
| 56 | S | A | -0.1101 | |
| 57 | A | A | -0.1958 | |
| 58 | G | A | -0.0835 | |
| 59 | Y | A | 0.4170 | |
| 60 | T | A | 0.1696 | |
| 61 | A | A | -0.1912 | |
| 62 | Y | A | -0.8484 | |
| 63 | S | A | -1.5050 | |
| 64 | D | A | -2.4073 | |
| 65 | S | A | -1.7351 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.6132 | |
| 68 | G | A | -1.7736 | |
| 69 | R | A | -1.4862 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8738 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.5700 | |
| 74 | R | A | -1.1809 | |
| 75 | D | A | -2.1392 | |
| 76 | K | A | -2.7059 | |
| 77 | A | A | -1.9790 | |
| 78 | K | A | -2.6886 | |
| 79 | N | A | -2.2677 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.6376 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.2484 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3901 | |
| 87 | S | A | -1.2080 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.3831 | |
| 90 | P | A | -1.9446 | |
| 91 | E | A | -2.3721 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -1.0052 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.7054 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.3528 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | S | A | 0.0000 | |
| 101 | R | A | 0.0000 | |
| 102 | S | A | 0.1230 | |
| 103 | A | A | -0.1580 | |
| 104 | G | A | -0.1303 | |
| 105 | Y | A | 0.5042 | |
| 106 | S | A | -0.0003 | |
| 107 | S | A | -0.1726 | |
| 108 | S | A | -0.4760 | |
| 109 | L | A | -0.5687 | |
| 110 | T | A | -1.5187 | |
| 111 | R | A | -3.3539 | |
| 112 | R | A | -3.8663 | |
| 113 | E | A | -3.4281 | |
| 114 | D | A | -2.0523 | |
| 115 | Y | A | -1.0761 | |
| 116 | A | A | -0.1869 | |
| 117 | Y | A | 0.4100 | |
| 118 | W | A | 0.4620 | |
| 119 | G | A | 0.0364 | |
| 120 | Q | A | -0.8159 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | 0.0000 | |
| 123 | Q | A | -1.0845 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.3212 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.7523 |