Project name: AF-P76561_4ae95395a2765c2

Status: done

Started: 2026-02-20 14:26:21
Settings
Chain sequence(s) A: MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues VE7A
Energy difference between WT (input) and mutated protein (by FoldX) 0.725729 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:13)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:19)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:31)
Show buried residues

Minimal score value
-3.534
Maximal score value
2.3396
Average score
-0.5541
Total score value
-128.544

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.2484
2 K A -1.6087
3 H A -1.5366
4 D A -1.5315
5 H A -0.8605
6 F A 0.0734
7 E A -0.9059 mutated: VE7A
8 V A -0.6109
9 Q A -1.0366
10 S A -1.4050
11 P A -1.9955
12 D A -2.7626
13 K A -2.7306
14 P A -1.8266
15 A A -1.8224
16 Q A -1.4354
17 Q A -0.9293
18 L A 0.0000
19 L A 0.0000
20 L A 0.0000
21 L A 0.0000
22 F A 0.0000
23 H A 0.0000
24 G A 0.0000
25 V A 0.3657
26 G A -0.8531
27 D A -0.8128
28 N A -0.3021
29 P A 0.0000
30 V A 1.0466
31 A A 0.1971
32 M A 0.0000
33 G A 0.0000
34 E A -1.3308
35 I A -0.3582
36 G A 0.0000
37 N A -1.1553
38 W A -0.1583
39 F A 0.0000
40 A A -0.2534
41 P A -0.2169
42 L A 0.3606
43 F A 0.0000
44 P A -0.9318
45 D A -1.7918
46 A A 0.0000
47 L A 0.0000
48 V A 0.0000
49 V A 0.0000
50 S A 0.0000
51 V A 0.0000
52 G A 0.0000
53 G A 0.0000
54 A A -1.3693
55 E A -2.3002
56 P A -1.7558
57 S A -1.4010
58 G A -1.3999
59 N A -1.4804
60 P A -0.8886
61 A A -0.5873
62 G A 0.0000
63 R A -1.6568
64 Q A -0.8798
65 W A 0.0000
66 F A 0.0000
67 S A -0.4794
68 V A 0.2923
69 Q A -0.8953
70 G A -0.6793
71 I A -0.7585
72 T A -1.6157
73 E A -2.8122
74 D A -2.8567
75 N A -1.9076
76 R A -1.7678
77 Q A -1.6731
78 A A -1.4503
79 R A -0.9133
80 V A 0.0000
81 D A -1.9291
82 A A -0.8989
83 I A -0.4140
84 M A 0.0000
85 P A -0.9852
86 T A -0.7566
87 F A 0.0000
88 I A -0.8277
89 E A -1.6941
90 T A 0.0000
91 V A 0.0000
92 R A -1.5027
93 Y A -1.1700
94 W A 0.0000
95 Q A 0.0000
96 K A -2.5022
97 Q A -2.1444
98 S A -1.6334
99 G A -1.6777
100 V A 0.0000
101 G A -1.2975
102 A A -0.8665
103 N A -1.2922
104 A A 0.0000
105 T A 0.0000
106 A A 0.0000
107 L A 0.0000
108 I A 0.0000
109 G A 0.0000
110 F A 0.4363
111 S A 0.0000
112 Q A 0.0000
113 G A 0.0000
114 A A 0.0000
115 I A 0.0000
116 M A 0.0000
117 V A 0.0000
118 L A 0.0000
119 E A 0.0000
120 S A 0.0000
121 I A 0.0000
122 K A -0.7988
123 A A -0.7896
124 E A -0.9219
125 P A -0.7805
126 G A -0.7659
127 L A 0.0000
128 A A 0.0000
129 S A 0.0000
130 R A -0.4436
131 V A 0.0000
132 I A 0.0000
133 A A 0.0000
134 F A 0.0000
135 N A 0.0000
136 G A 0.0000
137 R A 0.0000
138 Y A 0.0000
139 A A 0.0000
140 S A -0.5501
141 L A 0.0567
142 P A 0.0000
143 E A -1.7243
144 T A -0.8134
145 A A -0.4271
146 S A -0.4697
147 T A -0.5534
148 A A -0.3900
149 T A 0.0000
150 T A 0.0000
151 I A 0.0000
152 H A 0.0000
153 L A 0.0000
154 I A 0.0000
155 H A 0.0000
156 G A 0.0000
157 G A -2.1532
158 E A -2.8535
159 D A 0.0000
160 P A -0.4356
161 V A 0.9288
162 I A 0.0000
163 D A -1.6722
164 L A -0.6024
165 A A -0.3937
166 H A -0.6494
167 A A 0.0000
168 V A -0.0343
169 A A -0.1118
170 A A 0.0000
171 Q A -0.2719
172 E A -1.0658
173 A A -0.5062
174 L A 0.0000
175 I A 1.1108
176 S A -0.1463
177 A A -0.4063
178 G A 0.1025
179 G A 0.0000
180 D A -0.0400
181 V A 0.1830
182 T A 0.3125
183 L A 0.3905
184 D A 0.2974
185 I A 0.3059
186 V A 0.0000
187 E A -2.9127
188 D A -3.1252
189 L A 0.0000
190 G A -1.5735
191 H A -0.3365
192 A A 0.1805
193 I A -0.1556
194 D A -1.1338
195 N A -1.7104
196 R A -1.4759
197 S A 0.0000
198 M A 0.0000
199 Q A -1.1814
200 F A -0.2611
201 A A 0.0000
202 L A 0.0000
203 D A -0.5455
204 H A 0.1135
205 L A 0.0000
206 R A 0.4510
207 Y A 1.3473
208 T A 1.2272
209 I A 2.3396
210 P A 0.0000
211 K A -0.1953
212 H A -0.2767
213 Y A 1.2054
214 F A 0.9567
215 D A -1.4846
216 E A -1.9587
217 A A -0.4707
218 L A 0.5854
219 S A -0.8224
220 G A -1.3781
221 G A -2.3836
222 K A -2.8915
223 P A -2.3716
224 G A -2.5283
225 D A -3.5340
226 D A -3.0987
227 D A -2.3027
228 V A 0.2811
229 I A 0.3209
230 E A -0.1871
231 M A 0.6568
232 M A 0.9285
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Laboratory of Theory of Biopolymers 2018