| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSHYAITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVFAYYSYDDIYYAYSPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4098 | |
| 2 | S | A | -0.1645 | |
| 3 | S | A | 0.2129 | |
| 4 | V | A | 1.3301 | |
| 5 | S | A | 0.4509 | |
| 6 | S | A | 0.1444 | |
| 7 | V | A | 0.4728 | |
| 8 | P | A | -0.5840 | |
| 9 | T | A | -1.3700 | |
| 10 | K | A | -2.2713 | |
| 11 | L | A | -1.4822 | |
| 12 | E | A | -1.5825 | |
| 13 | V | A | 0.2704 | |
| 14 | V | A | 1.6242 | |
| 15 | A | A | 0.9283 | |
| 16 | A | A | 0.3020 | |
| 17 | T | A | -0.3865 | |
| 18 | P | A | -0.8089 | |
| 19 | T | A | -0.5311 | |
| 20 | S | A | -0.3160 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7734 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.6315 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.3975 | |
| 27 | A | A | -1.2559 | |
| 28 | S | A | -0.7085 | |
| 29 | S | A | -0.6403 | |
| 30 | S | A | -0.4266 | |
| 31 | S | A | -0.2556 | |
| 32 | V | A | 0.0000 | |
| 33 | S | A | 0.0739 | |
| 34 | H | A | -0.0716 | |
| 35 | Y | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.5088 | |
| 39 | Y | A | -0.4117 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.3213 | |
| 42 | T | A | -1.1890 | |
| 43 | G | A | -1.2191 | |
| 44 | G | A | -1.3437 | |
| 45 | N | A | -1.5438 | |
| 46 | S | A | -0.9076 | |
| 47 | P | A | -0.4265 | |
| 48 | V | A | 0.2617 | |
| 49 | Q | A | -1.1961 | |
| 50 | E | A | -1.7236 | |
| 51 | F | A | -0.6146 | |
| 52 | T | A | -0.1292 | |
| 53 | V | A | 0.0032 | |
| 54 | P | A | -0.3537 | |
| 55 | G | A | -0.4052 | |
| 56 | S | A | -0.4427 | |
| 57 | S | A | -0.4666 | |
| 58 | S | A | -0.6457 | |
| 59 | T | A | -0.1974 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2546 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4735 | |
| 64 | G | A | -0.6855 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8198 | |
| 67 | P | A | -0.9832 | |
| 68 | G | A | -1.0611 | |
| 69 | V | A | -0.8855 | |
| 70 | D | A | -1.7672 | |
| 71 | Y | A | 0.0000 | |
| 72 | T | A | -0.7475 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.1443 | |
| 75 | V | A | 0.0000 | |
| 76 | F | A | 0.6843 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 1.4112 | |
| 79 | Y | A | 0.0000 | |
| 80 | S | A | 0.3906 | |
| 81 | Y | A | 0.0725 | |
| 82 | D | A | -1.6828 | |
| 83 | D | A | -1.2779 | |
| 84 | I | A | 1.3854 | |
| 85 | Y | A | 2.1617 | |
| 86 | Y | A | 2.1977 | |
| 87 | A | A | 1.6497 | |
| 88 | Y | A | 1.6740 | |
| 89 | S | A | 0.6719 | |
| 90 | P | A | 0.3950 | |
| 91 | S | A | 0.0000 | |
| 92 | S | A | -0.5649 | |
| 93 | I | A | -0.5724 | |
| 94 | N | A | -1.7029 | |
| 95 | Y | A | -1.3634 | |
| 96 | R | A | -2.2940 | |
| 97 | T | A | -1.1640 |