| Chain sequence(s) |
H: EVKLLESGGGLVQPGGSLKLSCAASGFDFSGYWMNWVRQAPGKGLEWIGEINPDSRTINYTPSLKDKFIISRDNAKNTLYLQMNKVRSEDTALYYCVRGGWVQGYYVMDYWGQGTSVTDSS
L: DIQMTQTTSSLSASLGDRVIISCRASQDINNYLNWYQQKPDGTVKLLIYYISRLYSGVPSRFSGGGSGTEFSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:21)
[INFO] Main: Simulation completed successfully. (00:04:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1422 | |
| 2 | V | H | -1.3740 | |
| 3 | K | H | -1.5541 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.1714 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3834 | |
| 8 | G | H | -0.6635 | |
| 9 | G | H | -0.3393 | |
| 11 | G | H | 0.3539 | |
| 12 | L | H | 1.1052 | |
| 13 | V | H | -0.1246 | |
| 14 | Q | H | -1.5545 | |
| 15 | P | H | -1.9821 | |
| 16 | G | H | -1.8326 | |
| 17 | G | H | -1.5371 | |
| 18 | S | H | -1.4308 | |
| 19 | L | H | -0.7891 | |
| 20 | K | H | -1.1205 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3374 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.4655 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.5289 | |
| 27 | G | H | -1.6674 | |
| 28 | F | H | -1.4202 | |
| 29 | D | H | -2.0612 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.5961 | |
| 36 | G | H | -0.8163 | |
| 37 | Y | H | -0.0380 | |
| 38 | W | H | 0.4621 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9416 | |
| 45 | A | H | -1.2987 | |
| 46 | P | H | -1.0189 | |
| 47 | G | H | -1.4530 | |
| 48 | K | H | -2.3127 | |
| 49 | G | H | -1.4980 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.2537 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.8048 | |
| 58 | P | H | -1.1375 | |
| 59 | D | H | -1.9870 | |
| 62 | S | H | -1.5718 | |
| 63 | R | H | -2.1284 | |
| 64 | T | H | -0.8394 | |
| 65 | I | H | 0.1100 | |
| 66 | N | H | 0.1189 | |
| 67 | Y | H | -0.3035 | |
| 68 | T | H | -0.9858 | |
| 69 | P | H | -1.3438 | |
| 70 | S | H | -1.1379 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.4214 | |
| 74 | D | H | -2.7605 | |
| 75 | K | H | -1.9151 | |
| 76 | F | H | 0.0000 | |
| 77 | I | H | 0.3303 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | 0.0568 | |
| 80 | R | H | -1.0478 | |
| 81 | D | H | -1.4784 | |
| 82 | N | H | -2.0323 | |
| 83 | A | H | -1.3463 | |
| 84 | K | H | -2.3373 | |
| 85 | N | H | -2.1888 | |
| 86 | T | H | -1.1244 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.1254 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.4132 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.7357 | |
| 93 | K | H | -2.7118 | |
| 94 | V | H | 0.0000 | |
| 95 | R | H | -3.0697 | |
| 96 | S | H | -2.0834 | |
| 97 | E | H | -2.4983 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7905 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | -0.0190 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | W | H | 1.5732 | |
| 110 | V | H | 1.6881 | |
| 111 | Q | H | -0.1556 | |
| 112A | G | H | 0.0683 | |
| 112 | Y | H | 0.9527 | |
| 113 | Y | H | 1.2370 | |
| 114 | V | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.0649 | |
| 118 | W | H | -0.1939 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2891 | |
| 121 | G | H | -0.4564 | |
| 122 | T | H | -0.3564 | |
| 123 | S | H | -0.2194 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2165 | |
| 126 | D | H | 0.0000 | |
| 127 | S | H | -0.5343 | |
| 128 | S | H | -0.4703 | |
| 1 | D | L | -2.1315 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.1748 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.2640 | |
| 6 | Q | L | -0.8784 | |
| 7 | T | L | -0.5778 | |
| 8 | T | L | -0.4297 | |
| 9 | S | L | -0.6915 | |
| 10 | S | L | -0.7209 | |
| 11 | L | L | -0.1941 | |
| 12 | S | L | -0.6595 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.1250 | |
| 15 | L | L | -0.6490 | |
| 16 | G | L | -1.6376 | |
| 17 | D | L | -1.9646 | |
| 18 | R | L | -2.1271 | |
| 19 | V | L | 0.0000 | |
| 20 | I | L | 1.4593 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2733 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5865 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1451 | |
| 27 | Q | L | -2.7700 | |
| 28 | D | L | -3.0545 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -2.0720 | |
| 37 | N | L | -1.1610 | |
| 38 | Y | L | -0.0767 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0496 | |
| 45 | K | L | -1.6100 | |
| 46 | P | L | -1.3601 | |
| 47 | D | L | -2.2523 | |
| 48 | G | L | -1.5372 | |
| 49 | T | L | -1.3342 | |
| 50 | V | L | 0.0000 | |
| 51 | K | L | -1.1307 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.3966 | |
| 56 | Y | L | 0.1588 | |
| 57 | I | L | 0.0000 | |
| 65 | S | L | -0.5385 | |
| 66 | R | L | -0.4591 | |
| 67 | L | L | 0.0103 | |
| 68 | Y | L | 0.0000 | |
| 69 | S | L | -0.4217 | |
| 70 | G | L | -0.5356 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3341 | |
| 74 | S | L | -0.4947 | |
| 75 | R | L | -1.0309 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.2040 | |
| 78 | G | L | -0.2045 | |
| 79 | G | L | -0.8513 | |
| 80 | G | L | -1.3415 | |
| 83 | S | L | -1.5583 | |
| 84 | G | L | -2.0974 | |
| 85 | T | L | -2.2783 | |
| 86 | E | L | -2.1697 | |
| 87 | F | L | 0.0000 | |
| 88 | S | L | -0.2888 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0859 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5969 | |
| 93 | N | L | -2.4642 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.4893 | |
| 96 | Q | L | -2.2491 | |
| 97 | E | L | -2.6681 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.7904 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7410 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | N | L | -0.4144 | |
| 109 | T | L | -0.0206 | |
| 114 | L | L | 0.2948 | |
| 115 | P | L | -0.2530 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7844 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.2658 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3919 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6067 | |
| 126 | I | L | -0.2921 | |
| 127 | K | L | -1.3166 |