| Chain sequence(s) |
A: MSHHHHHHSGKEEKVEKIYKEVRDTAIWHQGRIQNKYWYGFDKGEDPREVILEEVKELEKEILSEEFYKKMGLDEDPELKKVFEEVFKKKFEEIKDYIRNEMTHWSGVSEKLLEAIEKMKEEMLKKLGNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:16)
[INFO] Main: Simulation completed successfully. (00:09:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2395 | |
| 2 | S | A | -1.0576 | |
| 3 | H | A | -2.1873 | |
| 4 | H | A | -2.5849 | |
| 5 | H | A | -2.8053 | |
| 6 | H | A | -3.1909 | |
| 7 | H | A | -3.2396 | |
| 8 | H | A | -3.3802 | |
| 9 | S | A | -3.0155 | |
| 10 | G | A | -2.9422 | |
| 11 | K | A | -3.1675 | |
| 12 | E | A | -4.1589 | |
| 13 | E | A | -4.1354 | |
| 14 | K | A | -3.3013 | |
| 15 | V | A | 0.0000 | |
| 16 | E | A | -3.5401 | |
| 17 | K | A | -3.4539 | |
| 18 | I | A | 0.0000 | |
| 19 | Y | A | -2.6251 | |
| 20 | K | A | -2.6431 | |
| 21 | E | A | -2.3467 | |
| 22 | V | A | 0.0000 | |
| 23 | R | A | -1.3399 | |
| 24 | D | A | -0.9946 | |
| 25 | T | A | -0.4564 | |
| 26 | A | A | 0.0000 | |
| 27 | I | A | 0.7140 | |
| 28 | W | A | 0.9221 | |
| 29 | H | A | 0.0000 | |
| 30 | Q | A | -0.3063 | |
| 31 | G | A | -0.6968 | |
| 32 | R | A | -1.6417 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.9061 | |
| 35 | N | A | -0.8710 | |
| 36 | K | A | -0.8141 | |
| 37 | Y | A | -0.5121 | |
| 38 | W | A | 0.7857 | |
| 39 | Y | A | 0.5738 | |
| 40 | G | A | 0.0000 | |
| 41 | F | A | 0.0908 | |
| 42 | D | A | -1.5578 | |
| 43 | K | A | -2.4153 | |
| 44 | G | A | -2.1580 | |
| 45 | E | A | -3.0767 | |
| 46 | D | A | -2.8419 | |
| 47 | P | A | -1.6456 | |
| 48 | R | A | -3.1041 | |
| 49 | E | A | -3.5941 | |
| 50 | V | A | -2.1462 | |
| 51 | I | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | E | A | -3.2063 | |
| 54 | E | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | K | A | -3.4579 | |
| 57 | E | A | -3.3961 | |
| 58 | L | A | 0.0000 | |
| 59 | E | A | -2.7656 | |
| 60 | K | A | -3.3124 | |
| 61 | E | A | -3.1377 | |
| 62 | I | A | 0.0000 | |
| 63 | L | A | -1.7640 | |
| 64 | S | A | -2.6879 | |
| 65 | E | A | -3.8778 | |
| 66 | E | A | -3.8714 | |
| 67 | F | A | 0.0000 | |
| 68 | Y | A | -3.2714 | |
| 69 | K | A | -4.2887 | |
| 70 | K | A | -3.5634 | |
| 71 | M | A | 0.0000 | |
| 72 | G | A | -2.8074 | |
| 73 | L | A | 0.0000 | |
| 74 | D | A | -4.0853 | |
| 75 | E | A | -3.4098 | |
| 76 | D | A | -2.8547 | |
| 77 | P | A | -2.7403 | |
| 78 | E | A | -3.1785 | |
| 79 | L | A | 0.0000 | |
| 80 | K | A | -2.9572 | |
| 81 | K | A | -3.2426 | |
| 82 | V | A | -2.2650 | |
| 83 | F | A | 0.0000 | |
| 84 | E | A | -2.3296 | |
| 85 | E | A | -2.8334 | |
| 86 | V | A | 0.0000 | |
| 87 | F | A | 0.0000 | |
| 88 | K | A | -3.0860 | |
| 89 | K | A | -3.6186 | |
| 90 | K | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | E | A | -4.0944 | |
| 93 | E | A | -3.8492 | |
| 94 | I | A | 0.0000 | |
| 95 | K | A | -3.4751 | |
| 96 | D | A | -4.1429 | |
| 97 | Y | A | -3.1824 | |
| 98 | I | A | 0.0000 | |
| 99 | R | A | -4.1507 | |
| 100 | N | A | -3.5961 | |
| 101 | E | A | -3.2570 | |
| 102 | M | A | 0.0000 | |
| 103 | T | A | -1.2526 | |
| 104 | H | A | -0.9531 | |
| 105 | W | A | -0.5976 | |
| 106 | S | A | -0.8256 | |
| 107 | G | A | -1.2147 | |
| 108 | V | A | 0.0000 | |
| 109 | S | A | -1.2235 | |
| 110 | E | A | -2.3803 | |
| 111 | K | A | -2.1167 | |
| 112 | L | A | 0.0000 | |
| 113 | L | A | -1.6565 | |
| 114 | E | A | -2.8825 | |
| 115 | A | A | 0.0000 | |
| 116 | I | A | 0.0000 | |
| 117 | E | A | -3.2650 | |
| 118 | K | A | -3.0882 | |
| 119 | M | A | 0.0000 | |
| 120 | K | A | -3.0611 | |
| 121 | E | A | -3.3683 | |
| 122 | E | A | -3.1298 | |
| 123 | M | A | 0.0000 | |
| 124 | L | A | -2.7942 | |
| 125 | K | A | -3.1447 | |
| 126 | K | A | -2.5897 | |
| 127 | L | A | 0.0000 | |
| 128 | G | A | -2.4704 | |
| 129 | N | A | -2.2107 | |
| 130 | S | A | -1.5978 |