| Chain sequence(s) |
L: KRLPAAMAPWTD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 36 | K | L | -2.0338 | |
| 37 | R | L | -2.0443 | |
| 38 | L | L | 0.2093 | |
| 39 | P | L | -0.1393 | |
| 40 | A | L | 0.0248 | |
| 41 | A | L | 0.2577 | |
| 42 | M | L | 1.0660 | |
| 43 | A | L | 0.1613 | |
| 44 | P | L | -0.0407 | |
| 45 | W | L | 1.1286 | |
| 46 | T | L | -0.1837 | |
| 47 | D | L | -1.8024 |