| Chain sequence(s) |
A: MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQITIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:35)
[INFO] Main: Simulation completed successfully. (00:04:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8309 | |
| 2 | S | A | -0.1014 | |
| 3 | S | A | -0.6766 | |
| 4 | G | A | -0.7256 | |
| 5 | N | A | -0.8074 | |
| 6 | I | A | 0.5622 | |
| 7 | L | A | 1.3165 | |
| 8 | W | A | 0.6377 | |
| 9 | G | A | -0.1613 | |
| 10 | S | A | -1.0546 | |
| 11 | Q | A | -1.9811 | |
| 12 | N | A | -1.6244 | |
| 13 | P | A | -0.1517 | |
| 14 | I | A | 1.1939 | |
| 15 | V | A | 2.0276 | |
| 16 | F | A | 1.3810 | |
| 17 | K | A | -1.0120 | |
| 18 | N | A | -1.1412 | |
| 19 | S | A | -0.6211 | |
| 20 | F | A | 0.1749 | |
| 21 | G | A | 0.3065 | |
| 22 | V | A | 1.3161 | |
| 23 | S | A | -0.4815 | |
| 24 | N | A | -1.7130 | |
| 25 | A | A | -1.5619 | |
| 26 | D | A | -2.4883 | |
| 27 | T | A | -1.7214 | |
| 28 | G | A | -1.7444 | |
| 29 | S | A | -1.8468 | |
| 30 | Q | A | -2.9878 | |
| 31 | D | A | -3.2182 | |
| 32 | D | A | -2.5857 | |
| 33 | L | A | -0.5654 | |
| 34 | S | A | -1.3499 | |
| 35 | Q | A | -2.6606 | |
| 36 | Q | A | -2.2473 | |
| 37 | N | A | 0.0000 | |
| 38 | P | A | -1.1161 | |
| 39 | F | A | -0.3149 | |
| 40 | A | A | -0.8828 | |
| 41 | E | A | -1.7282 | |
| 42 | G | A | -0.1290 | |
| 43 | Y | A | 0.5504 | |
| 44 | G | A | 0.8267 | |
| 45 | V | A | 2.2994 | |
| 46 | L | A | 1.8762 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 3.5646 | |
| 49 | L | A | 2.5550 | |
| 50 | L | A | 0.0000 | |
| 51 | M | A | 2.6262 | |
| 52 | V | A | 2.4316 | |
| 53 | I | A | 0.0000 | |
| 54 | Q | A | 0.6125 | |
| 55 | A | A | 0.4610 | |
| 56 | I | A | 0.8136 | |
| 57 | A | A | 0.0000 | |
| 58 | N | A | -0.2538 | |
| 59 | N | A | -0.7643 | |
| 60 | K | A | -0.9936 | |
| 61 | F | A | 0.0921 | |
| 62 | I | A | 0.1777 | |
| 63 | E | A | -1.8341 | |
| 64 | V | A | 0.0000 | |
| 65 | Q | A | -2.1533 | |
| 66 | K | A | -2.8166 | |
| 67 | N | A | -2.5092 | |
| 68 | A | A | 0.0000 | |
| 69 | E | A | -3.8004 | |
| 70 | R | A | -3.2744 | |
| 71 | A | A | 0.0000 | |
| 72 | R | A | -3.7584 | |
| 73 | N | A | -2.9628 | |
| 74 | T | A | 0.0000 | |
| 75 | Q | A | -3.8088 | |
| 76 | E | A | -3.8602 | |
| 77 | K | A | -3.0858 | |
| 78 | S | A | 0.0000 | |
| 79 | N | A | -3.7665 | |
| 80 | E | A | -3.5947 | |
| 81 | M | A | 0.0000 | |
| 82 | D | A | -3.4716 | |
| 83 | E | A | -3.4725 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | -2.9223 | |
| 86 | A | A | -2.3111 | |
| 87 | K | A | -3.2522 | |
| 88 | A | A | 0.0000 | |
| 89 | A | A | -2.5383 | |
| 90 | K | A | -2.6938 | |
| 91 | G | A | -2.9251 | |
| 92 | D | A | -3.1461 | |
| 93 | A | A | -2.4388 | |
| 94 | K | A | -2.9610 | |
| 95 | T | A | -2.8934 | |
| 96 | K | A | -3.3175 | |
| 97 | E | A | -3.1512 | |
| 98 | E | A | -3.4164 | |
| 99 | V | A | 0.0000 | |
| 100 | P | A | -2.4571 | |
| 101 | E | A | -2.9649 | |
| 102 | D | A | -2.7735 | |
| 103 | V | A | 0.0000 | |
| 104 | I | A | -2.3442 | |
| 105 | K | A | -3.6016 | |
| 106 | Y | A | -2.5367 | |
| 107 | M | A | 0.0000 | |
| 108 | R | A | -3.2948 | |
| 109 | D | A | -3.1879 | |
| 110 | N | A | -1.9965 | |
| 111 | G | A | -1.5137 | |
| 112 | I | A | 0.0000 | |
| 113 | L | A | -0.2245 | |
| 114 | I | A | 0.0000 | |
| 115 | D | A | -1.6715 | |
| 116 | G | A | -1.0263 | |
| 117 | M | A | -1.0827 | |
| 118 | T | A | -1.1651 | |
| 119 | I | A | 0.0000 | |
| 120 | D | A | -2.3845 | |
| 121 | D | A | -2.1616 | |
| 122 | Y | A | 0.0000 | |
| 123 | M | A | -1.5194 | |
| 124 | A | A | -1.7503 | |
| 125 | K | A | -1.9456 | |
| 126 | Y | A | -0.6906 | |
| 127 | G | A | -2.1608 | |
| 128 | D | A | -2.8464 | |
| 129 | H | A | -2.4704 | |
| 130 | G | A | -2.4733 | |
| 131 | K | A | -2.9802 | |
| 132 | L | A | 0.0000 | |
| 133 | D | A | -3.0247 | |
| 134 | K | A | -2.9845 | |
| 135 | G | A | -1.7108 | |
| 136 | G | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | Q | A | -1.6981 | |
| 139 | A | A | -0.9942 | |
| 140 | I | A | 0.0000 | |
| 141 | K | A | -1.5775 | |
| 142 | A | A | -0.8942 | |
| 143 | A | A | -0.8259 | |
| 144 | L | A | 0.0000 | |
| 145 | D | A | -2.1099 | |
| 146 | N | A | -2.0103 | |
| 147 | D | A | -2.0194 | |
| 148 | A | A | 0.0000 | |
| 149 | N | A | -3.0588 | |
| 150 | R | A | -2.9777 | |
| 151 | N | A | 0.0000 | |
| 152 | T | A | -2.0645 | |
| 153 | D | A | -2.0418 | |
| 154 | L | A | -0.7490 | |
| 155 | M | A | -1.4590 | |
| 156 | S | A | -0.6654 | |
| 157 | Q | A | -0.7073 | |
| 158 | G | A | -0.8553 | |
| 159 | Q | A | -1.0434 | |
| 160 | I | A | 0.4157 | |
| 161 | T | A | -0.5589 | |
| 162 | I | A | -1.1633 | |
| 163 | Q | A | -2.1604 | |
| 164 | K | A | -2.8605 | |
| 165 | M | A | 0.0000 | |
| 166 | S | A | -2.2411 | |
| 167 | Q | A | -3.2167 | |
| 168 | E | A | -3.0274 | |
| 169 | L | A | 0.0000 | |
| 170 | N | A | -2.2381 | |
| 171 | A | A | -1.4722 | |
| 172 | V | A | 0.0000 | |
| 173 | L | A | -0.3073 | |
| 174 | T | A | -0.4909 | |
| 175 | Q | A | -0.5754 | |
| 176 | L | A | 0.0000 | |
| 177 | T | A | 0.1070 | |
| 178 | G | A | -0.2770 | |
| 179 | L | A | -0.0164 | |
| 180 | I | A | 0.5482 | |
| 181 | S | A | -0.7608 | |
| 182 | K | A | -1.5182 | |
| 183 | W | A | -0.4820 | |
| 184 | G | A | -0.8608 | |
| 185 | E | A | -1.6846 | |
| 186 | I | A | -0.3361 | |
| 187 | S | A | 0.0114 | |
| 188 | S | A | -0.7722 | |
| 189 | M | A | -0.0942 | |
| 190 | I | A | 0.3507 | |
| 191 | A | A | -0.4236 | |
| 192 | Q | A | -1.1010 | |
| 193 | K | A | -1.4880 | |
| 194 | T | A | -0.3442 | |
| 195 | Y | A | 0.4206 | |
| 196 | S | A | -0.4861 |