| Chain sequence(s) |
A: GPAPLNPEPELVSTDEYVTPTDLLYYAETDLLTETGHPTKDIVVNGKVLVPKVSAYQWKVFKLTLPDPNKFPLPSEDFVDFSTEILIWRLKAIYIKRFGPLGKGTYGHPNFNALGDVDNPTKPIHPGADDRQNLSWEPVLRQEYIIGDEPPIGKYTTLAAPADGLPPGAKPPTELKSTIIQDGDMADIGFGAKDFKKLEPEKDNVPEIIKDTTTKEPDYEGMKAEPTGRRMFTYGEKTKSRDVKKYVRNGPDLEPPPDAPPPSPLYVPPSPSSPYAVRPPRDYFTLPDRGEITEEDLMFNKPIFLEKASGKNNFVLWHNQLYITVLDNTRAEIETIRTQISTPPVNVYDPSNYVTSQRYTEEYQIELIVQLCKIPLTPETLELIRRIDPSILEEANLPEIPPVERPDPYAGLKFREIDLTNKLSSDLEKSELGRLYLNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6085 | |
| 2 | P | A | -0.2774 | |
| 3 | A | A | -0.0882 | |
| 4 | P | A | -0.0090 | |
| 5 | L | A | 0.4404 | |
| 6 | N | A | -1.2575 | |
| 7 | P | A | -1.7102 | |
| 8 | E | A | -2.5993 | |
| 9 | P | A | -2.5134 | |
| 10 | E | A | -2.3088 | |
| 11 | L | A | -1.0515 | |
| 12 | V | A | -0.7563 | |
| 13 | S | A | -1.3323 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.8551 | |
| 16 | E | A | -2.6289 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9439 | |
| 20 | P | A | -0.9110 | |
| 21 | T | A | -0.9017 | |
| 22 | D | A | -1.6488 | |
| 23 | L | A | -0.5458 | |
| 24 | L | A | -0.2688 | |
| 25 | Y | A | 0.0000 | |
| 26 | Y | A | -0.6852 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0736 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2610 | |
| 31 | L | A | 0.3643 | |
| 32 | L | A | 0.1102 | |
| 33 | T | A | -0.1492 | |
| 34 | E | A | -0.4113 | |
| 35 | T | A | -0.4440 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.1597 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4594 | |
| 40 | K | A | -2.1527 | |
| 41 | D | A | -0.7388 | |
| 42 | I | A | 1.2722 | |
| 43 | V | A | 2.2276 | |
| 44 | V | A | 1.6135 | |
| 45 | N | A | -0.5687 | |
| 46 | G | A | -0.3981 | |
| 47 | K | A | -0.1590 | |
| 48 | V | A | 1.9342 | |
| 49 | L | A | 2.4881 | |
| 50 | V | A | 1.1788 | |
| 51 | P | A | -0.0196 | |
| 52 | K | A | -1.0560 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.3620 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2053 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2938 | |
| 70 | K | A | -1.8468 | |
| 71 | F | A | -0.8342 | |
| 72 | P | A | -0.6848 | |
| 73 | L | A | -0.6801 | |
| 74 | P | A | -0.7019 | |
| 75 | S | A | -1.5459 | |
| 76 | E | A | -2.8958 | |
| 77 | D | A | -2.8067 | |
| 78 | F | A | -1.4251 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -1.9600 | |
| 81 | F | A | -0.1350 | |
| 82 | S | A | -0.3471 | |
| 83 | T | A | -0.4819 | |
| 84 | E | A | -0.6403 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6213 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.3994 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.5178 | |
| 99 | G | A | -0.3005 | |
| 100 | P | A | -0.3569 | |
| 101 | L | A | -0.2016 | |
| 102 | G | A | -1.0913 | |
| 103 | K | A | -1.7052 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.6924 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8368 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.5751 | |
| 110 | N | A | -2.4020 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0731 | |
| 116 | D | A | -1.5625 | |
| 117 | V | A | -1.2687 | |
| 118 | D | A | -2.3171 | |
| 119 | N | A | -2.4654 | |
| 120 | P | A | -1.8249 | |
| 121 | T | A | -1.4709 | |
| 122 | K | A | -1.9324 | |
| 123 | P | A | -0.6473 | |
| 124 | I | A | -0.4207 | |
| 125 | H | A | -0.6161 | |
| 126 | P | A | -0.9764 | |
| 127 | G | A | -1.4160 | |
| 128 | A | A | -1.3182 | |
| 129 | D | A | -2.7103 | |
| 130 | D | A | -2.4387 | |
| 131 | R | A | -2.8395 | |
| 132 | Q | A | -2.3374 | |
| 133 | N | A | -2.0727 | |
| 134 | L | A | -1.0782 | |
| 135 | S | A | -0.6840 | |
| 136 | W | A | 0.0000 | |
| 137 | E | A | -0.5809 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | R | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | -0.2195 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.2579 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.1225 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.6236 | |
| 155 | Y | A | -0.5511 | |
| 156 | T | A | -0.2951 | |
| 157 | T | A | 0.0000 | |
| 158 | L | A | -0.2972 | |
| 159 | A | A | -0.0372 | |
| 160 | A | A | -0.3461 | |
| 161 | P | A | -0.8110 | |
| 162 | A | A | -0.9412 | |
| 163 | D | A | -1.9093 | |
| 164 | G | A | -1.1479 | |
| 165 | L | A | -0.6938 | |
| 166 | P | A | -0.7724 | |
| 167 | P | A | -0.7601 | |
| 168 | G | A | -0.7880 | |
| 169 | A | A | -0.9699 | |
| 170 | K | A | -1.9203 | |
| 171 | P | A | -1.1389 | |
| 172 | P | A | -0.6889 | |
| 173 | T | A | -0.3432 | |
| 174 | E | A | -0.1568 | |
| 175 | L | A | 0.6596 | |
| 176 | K | A | -0.3908 | |
| 177 | S | A | -0.3550 | |
| 178 | T | A | -0.2201 | |
| 179 | I | A | 0.1587 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7249 | |
| 182 | D | A | -1.0480 | |
| 183 | G | A | -0.7314 | |
| 184 | D | A | -0.7367 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.6479 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3534 | |
| 190 | F | A | -0.1511 | |
| 191 | G | A | -0.4913 | |
| 192 | A | A | -0.5907 | |
| 193 | K | A | -1.1569 | |
| 194 | D | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.6708 | |
| 197 | K | A | -2.8968 | |
| 198 | L | A | -1.8324 | |
| 199 | E | A | -2.6487 | |
| 200 | P | A | -2.7224 | |
| 201 | E | A | -2.9900 | |
| 202 | K | A | -3.2348 | |
| 203 | D | A | 0.0000 | |
| 204 | N | A | -1.3238 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.7382 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | K | A | -2.6512 | |
| 211 | D | A | -3.1649 | |
| 212 | T | A | -1.7816 | |
| 213 | T | A | -1.2597 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | E | A | -1.0780 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.2084 | |
| 219 | Y | A | -1.3954 | |
| 220 | E | A | -2.4116 | |
| 221 | G | A | -1.6620 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.1654 | |
| 224 | A | A | -1.3770 | |
| 225 | E | A | -1.2809 | |
| 226 | P | A | -0.8471 | |
| 227 | T | A | -0.5505 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4974 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.3022 | |
| 234 | Y | A | -0.0659 | |
| 235 | G | A | -0.8084 | |
| 236 | E | A | -1.9180 | |
| 237 | K | A | -1.4073 | |
| 238 | T | A | -1.0065 | |
| 239 | K | A | -1.3384 | |
| 240 | S | A | -1.9566 | |
| 241 | R | A | -2.8278 | |
| 242 | D | A | -2.7494 | |
| 243 | V | A | -1.3877 | |
| 244 | K | A | -2.1826 | |
| 245 | K | A | -1.8985 | |
| 246 | Y | A | -0.9950 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | N | A | -1.5375 | |
| 250 | G | A | -1.0787 | |
| 251 | P | A | -0.9683 | |
| 252 | D | A | -1.5275 | |
| 253 | L | A | -0.4687 | |
| 254 | E | A | -1.9661 | |
| 255 | P | A | -1.5939 | |
| 256 | P | A | 0.0000 | |
| 257 | P | A | -1.2267 | |
| 258 | D | A | -1.8440 | |
| 259 | A | A | -0.7395 | |
| 260 | P | A | -0.6603 | |
| 261 | P | A | -0.1105 | |
| 262 | P | A | 0.1289 | |
| 263 | S | A | 0.3044 | |
| 264 | P | A | 0.7047 | |
| 265 | L | A | 1.6214 | |
| 266 | Y | A | 1.5159 | |
| 267 | V | A | 1.9335 | |
| 268 | P | A | 0.6169 | |
| 269 | P | A | 0.5008 | |
| 270 | S | A | -0.0980 | |
| 271 | P | A | -0.1050 | |
| 272 | S | A | -0.1214 | |
| 273 | S | A | 0.2574 | |
| 274 | P | A | 0.2087 | |
| 275 | Y | A | 1.1298 | |
| 276 | A | A | 0.8112 | |
| 277 | V | A | 1.3689 | |
| 278 | R | A | -0.0368 | |
| 279 | P | A | -0.6020 | |
| 280 | P | A | 0.0000 | |
| 281 | R | A | -1.6624 | |
| 282 | D | A | -1.7376 | |
| 283 | Y | A | 0.1319 | |
| 284 | F | A | -0.1593 | |
| 285 | T | A | -0.8823 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.7550 | |
| 291 | E | A | -1.9653 | |
| 292 | I | A | -1.4669 | |
| 293 | T | A | -1.8035 | |
| 294 | E | A | -2.5780 | |
| 295 | E | A | -2.6981 | |
| 296 | D | A | -1.8710 | |
| 297 | L | A | -1.2014 | |
| 298 | M | A | -1.0730 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0578 | |
| 301 | K | A | -1.5653 | |
| 302 | P | A | -0.5967 | |
| 303 | I | A | -0.1397 | |
| 304 | F | A | -0.3756 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5663 | |
| 307 | K | A | -2.8920 | |
| 308 | A | A | 0.0000 | |
| 309 | S | A | -0.9995 | |
| 310 | G | A | -1.1301 | |
| 311 | K | A | -1.2292 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | F | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.6185 | |
| 319 | N | A | -0.5137 | |
| 320 | Q | A | -0.6501 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.6427 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.3028 | |
| 333 | I | A | -1.7017 | |
| 334 | E | A | -2.2566 | |
| 335 | T | A | -1.1344 | |
| 336 | I | A | 0.0849 | |
| 337 | R | A | -0.3356 | |
| 338 | T | A | 0.5219 | |
| 339 | Q | A | 0.6934 | |
| 340 | I | A | 2.0054 | |
| 341 | S | A | 0.6606 | |
| 342 | T | A | 0.0469 | |
| 343 | P | A | -0.3109 | |
| 344 | P | A | -0.1416 | |
| 345 | V | A | 0.5136 | |
| 346 | N | A | -0.0839 | |
| 347 | V | A | 1.6610 | |
| 348 | Y | A | 1.4920 | |
| 349 | D | A | -0.0421 | |
| 350 | P | A | -0.1530 | |
| 351 | S | A | 0.1133 | |
| 352 | N | A | 0.6424 | |
| 353 | Y | A | 1.1518 | |
| 354 | V | A | 1.8209 | |
| 355 | T | A | 0.4152 | |
| 356 | S | A | -0.2277 | |
| 357 | Q | A | -1.1543 | |
| 358 | R | A | -1.2772 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.8181 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.1085 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.2859 | |
| 365 | I | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4119 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5201 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5223 | |
| 376 | L | A | -0.2946 | |
| 377 | T | A | -0.8166 | |
| 378 | P | A | -1.2952 | |
| 379 | E | A | -2.1950 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.3037 | |
| 382 | E | A | -2.2255 | |
| 383 | L | A | -1.5951 | |
| 384 | I | A | 0.0000 | |
| 385 | R | A | -2.1134 | |
| 386 | R | A | -1.7451 | |
| 387 | I | A | -0.7946 | |
| 388 | D | A | -1.0513 | |
| 389 | P | A | -1.4050 | |
| 390 | S | A | 0.0000 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | E | A | -1.8038 | |
| 394 | E | A | -1.8867 | |
| 395 | A | A | -1.4377 | |
| 396 | N | A | -1.9478 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.3978 | |
| 399 | E | A | -2.1305 | |
| 400 | I | A | -1.1172 | |
| 401 | P | A | -0.8935 | |
| 402 | P | A | -0.9102 | |
| 403 | V | A | -0.0024 | |
| 404 | E | A | -1.8940 | |
| 405 | R | A | -1.9939 | |
| 406 | P | A | -1.4480 | |
| 407 | D | A | -1.5726 | |
| 408 | P | A | -0.8332 | |
| 409 | Y | A | -0.4871 | |
| 410 | A | A | -0.6543 | |
| 411 | G | A | -0.6858 | |
| 412 | L | A | -0.5949 | |
| 413 | K | A | -1.8931 | |
| 414 | F | A | -1.3726 | |
| 415 | R | A | -1.7038 | |
| 416 | E | A | -2.5892 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.6147 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3964 | |
| 421 | N | A | -1.8516 | |
| 422 | K | A | -1.5591 | |
| 423 | L | A | -0.6786 | |
| 424 | S | A | -0.8488 | |
| 425 | S | A | -0.8498 | |
| 426 | D | A | -2.0371 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.3831 | |
| 429 | K | A | -3.3670 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.0668 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.9291 | |
| 435 | L | A | -1.0829 | |
| 436 | Y | A | -0.6806 | |
| 437 | L | A | -0.4006 | |
| 438 | N | A | -1.6259 | |
| 439 | K | A | -1.8403 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine