Project name: AAB-PP3132

Status: done

Started: 2026-03-31 14:37:20
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYAMHWVRQAPGKGLEWVSAISGSGGTTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYSGSGYDYYFEPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1588
Maximal score value
2.2528
Average score
-0.5563
Total score value
-129.0521

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3298
1 V H -0.7491
2 Q H -0.8657
3 L H 0.0000
4 V H 1.3784
5 E H 0.0000
6 S H -0.1146
7 G H -0.7668
8 G H 0.1478
9 G H 0.9342
10 V H 1.5577
11 V H 0.0000
12 Q H -1.7833
13 P H -1.9018
14 G H -2.0498
15 E H -2.2144
16 S H -1.6080
17 L H -1.0030
18 K H -1.9381
19 I H 0.0000
20 S H -0.3117
21 C H 0.0000
22 A H 0.0295
23 A H -0.3874
24 S H -0.5744
25 G H -0.8755
26 F H -0.3002
27 T H -0.1740
28 F H 0.0000
29 S H -0.8070
30 S H -0.0841
31 Y H 0.2997
32 A H 0.1733
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7184
39 A H -1.0442
40 P H -0.9818
41 G H -1.4775
42 K H -2.3919
43 G H -1.6294
44 L H 0.0000
45 E H -1.2602
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.1866
52 G H -0.4466
53 S H -0.7024
54 G H -0.7924
55 G H -0.7073
56 T H -0.1093
57 T H 0.5313
58 F H 1.1189
59 Y H -0.1050
60 A H 0.0000
61 D H -2.2786
62 S H -1.7083
63 V H 0.0000
64 K H -2.3508
65 G H -1.6931
66 R H -1.2519
67 F H 0.0000
68 T H -0.6152
69 I H 0.0000
70 S H -0.4781
71 R H -1.0796
72 D H -1.6478
73 N H -1.8103
74 S H -1.6380
75 K H -2.4387
76 N H -1.8653
77 T H -1.0025
78 L H 0.0000
79 Y H -0.4604
80 L H 0.0000
81 Q H -1.1231
82 M H 0.0000
83 N H -1.7163
84 S H -1.6462
85 L H 0.0000
86 R H -2.7495
87 A H -1.9042
88 E H -2.3047
89 D H 0.0000
90 T H -0.4134
91 A H 0.0000
92 V H 0.8957
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.4147
98 S H 0.0000
99 T H 0.8916
100 Y H 2.2528
101 Y H 2.1571
102 Y H 1.7265
103 S H 0.2354
104 G H -0.4592
105 S H -0.2837
106 G H 0.1421
107 Y H 1.7556
108 D H 1.5758
109 Y H 1.5561
110 Y H 0.5859
111 F H 0.0000
112 E H -0.8136
113 P H -0.8207
114 W H 0.0000
115 G H 0.0000
116 P H -0.3980
117 G H 0.1677
118 T H 0.7518
119 L H 1.7376
120 V H 0.0000
121 T H 0.3784
122 V H 0.0000
123 S H -0.6586
124 S H -0.6018
125 D L -2.0064
126 I L 0.0000
127 Q L -2.1901
128 M L 0.0000
129 T L -1.2790
130 Q L 0.0000
131 S L -0.7296
132 P L -0.5978
133 S L -0.9600
134 S L -1.1323
135 L L -0.6514
136 S L -0.7036
137 A L 0.0000
138 S L -0.1484
139 V L 0.7183
140 G L -0.7067
141 D L -1.6690
142 R L -2.3427
143 V L 0.0000
144 T L -0.6348
145 I L 0.0000
146 T L -0.9693
147 C L 0.0000
148 R L -3.0404
149 A L 0.0000
150 S L -2.2507
151 Q L -2.8537
152 H L -2.5665
153 I L 0.0000
154 R L -2.5987
155 S L -1.4727
156 S L -0.3943
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.0240
162 Q L -1.6571
163 K L -2.2081
164 P L -1.4445
165 G L -1.6708
166 K L -2.5667
167 A L -1.5525
168 P L 0.0000
169 K L -1.9901
170 L L 0.0000
171 L L 0.0000
172 I L 0.0000
173 Y L -0.2282
174 G L -0.8444
175 A L 0.0000
176 S L -0.8013
177 S L -0.8455
178 R L -1.6867
179 A L -0.9645
180 T L -0.6081
181 G L -0.9209
182 I L 0.0000
183 P L -1.3869
184 D L -2.3068
185 R L -1.6179
186 F L 0.0000
187 S L -1.0289
188 G L -0.5978
189 S L -0.8374
190 G L -1.4421
191 S L -1.8382
192 G L -2.4340
193 T L -2.6646
194 D L -3.1588
195 F L 0.0000
196 T L -0.9086
197 L L 0.0000
198 T L -0.6143
199 I L 0.0000
200 S L -1.6830
201 S L -1.2895
202 L L 0.0000
203 Q L -0.7784
204 P L -0.6488
205 E L -1.8861
206 D L 0.0000
207 F L -0.5788
208 A L 0.0000
209 T L -1.2823
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2095
216 Y L 1.5705
217 I L 2.0431
218 T L 0.8449
219 P L -0.0437
220 Y L 0.0000
221 T L -0.4700
222 F L -0.4867
223 G L 0.0000
224 Q L -1.5950
225 G L 0.0000
226 T L 0.0000
227 K L -2.1545
228 V L 0.0000
229 E L -0.9095
230 I L 0.9389
231 K L -0.7861
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Laboratory of Theory of Biopolymers 2018