| Chain sequence(s) |
A: QQKFQFQFEQQ
C: QQKFQFQFEQQ B: QQKFQFQFEQQ E: QQKFQFQFEQQ D: QQKFQFQFEQQ G: QQKFQFQFEQQ F: QQKFQFQFEQQ I: QQKFQFQFEQQ H: QQKFQFQFEQQ K: QQKFQFQFEQQ J: QQKFQFQFEQQ L: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:49)
[INFO] Main: Simulation completed successfully. (00:06:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.3732 | |
| 2 | Q | A | 0.0000 | |
| 3 | K | A | -2.1209 | |
| 4 | F | A | 0.0000 | |
| 5 | Q | A | -1.8331 | |
| 6 | F | A | 0.0000 | |
| 7 | Q | A | -1.9786 | |
| 8 | F | A | 0.0000 | |
| 9 | E | A | -2.2451 | |
| 10 | Q | A | -2.0777 | |
| 11 | Q | A | -2.6112 | |
| 1 | Q | B | -2.6567 | |
| 2 | Q | B | 0.0000 | |
| 3 | K | B | -2.3602 | |
| 4 | F | B | 0.0000 | |
| 5 | Q | B | -1.9584 | |
| 6 | F | B | 0.0000 | |
| 7 | Q | B | -1.9056 | |
| 8 | F | B | 0.0000 | |
| 9 | E | B | 0.0000 | |
| 10 | Q | B | -2.0581 | |
| 11 | Q | B | -2.6142 | |
| 1 | Q | C | -3.0039 | |
| 2 | Q | C | 0.0000 | |
| 3 | K | C | -3.0039 | |
| 4 | F | C | 0.0000 | |
| 5 | Q | C | -1.9313 | |
| 6 | F | C | 0.0000 | |
| 7 | Q | C | -1.6662 | |
| 8 | F | C | 0.0000 | |
| 9 | E | C | 0.0000 | |
| 10 | Q | C | -2.1134 | |
| 11 | Q | C | -2.7514 | |
| 1 | Q | D | -2.2752 | |
| 2 | Q | D | -2.0496 | |
| 3 | K | D | -1.7789 | |
| 4 | F | D | -0.3950 | |
| 5 | Q | D | -1.2867 | |
| 6 | F | D | -0.3943 | |
| 7 | Q | D | -1.6556 | |
| 8 | F | D | -1.3170 | |
| 9 | E | D | -2.9378 | |
| 10 | Q | D | -2.9980 | |
| 11 | Q | D | -2.8282 | |
| 1 | Q | E | -2.2521 | |
| 2 | Q | E | -1.9952 | |
| 3 | K | E | -1.8829 | |
| 4 | F | E | -0.4239 | |
| 5 | Q | E | -1.3615 | |
| 6 | F | E | -0.6270 | |
| 7 | Q | E | -1.7332 | |
| 8 | F | E | -1.3826 | |
| 9 | E | E | -2.8981 | |
| 10 | Q | E | -3.0103 | |
| 11 | Q | E | -2.8315 | |
| 1 | Q | F | -3.0768 | |
| 2 | Q | F | 0.0000 | |
| 3 | K | F | -2.8705 | |
| 4 | F | F | 0.0000 | |
| 5 | Q | F | -1.8095 | |
| 6 | F | F | 0.0000 | |
| 7 | Q | F | -1.5667 | |
| 8 | F | F | 0.0000 | |
| 9 | E | F | -2.0066 | |
| 10 | Q | F | -2.0554 | |
| 11 | Q | F | -2.7149 | |
| 1 | Q | G | -2.5989 | |
| 2 | Q | G | 0.0000 | |
| 3 | K | G | -2.1907 | |
| 4 | F | G | 0.0000 | |
| 5 | Q | G | -1.6269 | |
| 6 | F | G | 0.0000 | |
| 7 | Q | G | -1.6560 | |
| 8 | F | G | 0.0000 | |
| 9 | E | G | 0.0000 | |
| 10 | Q | G | -2.0624 | |
| 11 | Q | G | -2.6747 | |
| 1 | Q | H | -2.5950 | |
| 2 | Q | H | 0.0000 | |
| 3 | K | H | -2.1115 | |
| 4 | F | H | 0.0000 | |
| 5 | Q | H | -1.6912 | |
| 6 | F | H | 0.0000 | |
| 7 | Q | H | -1.7772 | |
| 8 | F | H | 0.0000 | |
| 9 | E | H | -2.2420 | |
| 10 | Q | H | -2.1969 | |
| 11 | Q | H | -2.7202 | |
| 1 | Q | I | -3.0107 | |
| 2 | Q | I | -2.7206 | |
| 3 | K | I | -2.9883 | |
| 4 | F | I | 0.0000 | |
| 5 | Q | I | -1.8383 | |
| 6 | F | I | 0.0000 | |
| 7 | Q | I | -1.5473 | |
| 8 | F | I | 0.0000 | |
| 9 | E | I | -2.0621 | |
| 10 | Q | I | -2.1871 | |
| 11 | Q | I | -2.8030 | |
| 1 | Q | J | -2.4212 | |
| 2 | Q | J | -2.2517 | |
| 3 | K | J | -2.0831 | |
| 4 | F | J | -0.2816 | |
| 5 | Q | J | -1.2059 | |
| 6 | F | J | -0.3263 | |
| 7 | Q | J | -1.6252 | |
| 8 | F | J | -1.3003 | |
| 9 | E | J | -2.8599 | |
| 10 | Q | J | -2.9803 | |
| 11 | Q | J | -2.8032 | |
| 1 | Q | K | -2.2612 | |
| 2 | Q | K | -2.0946 | |
| 3 | K | K | -2.0712 | |
| 4 | F | K | -0.6157 | |
| 5 | Q | K | -1.4060 | |
| 6 | F | K | -0.4761 | |
| 7 | Q | K | -1.6504 | |
| 8 | F | K | -1.2606 | |
| 9 | E | K | -2.7030 | |
| 10 | Q | K | -2.6997 | |
| 11 | Q | K | -2.5781 | |
| 1 | Q | L | -2.6321 | |
| 2 | Q | L | 0.0000 | |
| 3 | K | L | -2.8076 | |
| 4 | F | L | 0.0000 | |
| 5 | Q | L | -1.9061 | |
| 6 | F | L | 0.0000 | |
| 7 | Q | L | -1.6170 | |
| 8 | F | L | 0.0000 | |
| 9 | E | L | -2.0208 | |
| 10 | Q | L | -2.0822 | |
| 11 | Q | L | -2.6475 |