| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFQIYYSELLSYGEAIVLTVPGSERSYDLTGLKPGTEYTVSINGVKGGTRSWSLSAIFTTGGHHHHHHC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0960 | |
| 2 | L | A | 0.4967 | |
| 3 | P | A | 0.0305 | |
| 4 | A | A | -0.0889 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0097 | |
| 7 | N | A | -1.3182 | |
| 8 | L | A | -0.2080 | |
| 9 | V | A | 1.1876 | |
| 10 | V | A | 0.5883 | |
| 11 | S | A | -0.6614 | |
| 12 | R | A | -1.9912 | |
| 13 | V | A | -1.0302 | |
| 14 | T | A | -1.6202 | |
| 15 | E | A | -2.4828 | |
| 16 | D | A | -2.5237 | |
| 17 | S | A | -1.9922 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.3140 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.6687 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.5225 | |
| 24 | A | A | -1.6094 | |
| 25 | P | A | -1.3671 | |
| 26 | D | A | -2.3723 | |
| 27 | A | A | -1.4776 | |
| 28 | A | A | -1.2253 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5721 | |
| 31 | S | A | -1.6687 | |
| 32 | F | A | 0.0000 | |
| 33 | Q | A | 0.1556 | |
| 34 | I | A | 0.0000 | |
| 35 | Y | A | 1.0303 | |
| 36 | Y | A | 0.9409 | |
| 37 | S | A | 0.6594 | |
| 38 | E | A | 0.4589 | |
| 39 | L | A | 2.0048 | |
| 40 | L | A | 2.0797 | |
| 41 | S | A | 1.0215 | |
| 42 | Y | A | 1.2118 | |
| 43 | G | A | -0.1751 | |
| 44 | E | A | -1.2776 | |
| 45 | A | A | 0.2270 | |
| 46 | I | A | 1.1878 | |
| 47 | V | A | 1.8759 | |
| 48 | L | A | 1.2951 | |
| 49 | T | A | 0.3497 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3216 | |
| 52 | G | A | -2.0155 | |
| 53 | S | A | -1.8673 | |
| 54 | E | A | -2.0464 | |
| 55 | R | A | -2.1589 | |
| 56 | S | A | -1.2340 | |
| 57 | Y | A | -1.1428 | |
| 58 | D | A | -1.8847 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3552 | |
| 61 | G | A | -1.4395 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.8411 | |
| 64 | P | A | -2.5775 | |
| 65 | G | A | -2.0254 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -0.1220 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | 1.0374 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.6536 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.4025 | |
| 76 | K | A | -2.1563 | |
| 77 | G | A | -1.6704 | |
| 78 | G | A | -1.4761 | |
| 79 | T | A | -1.1600 | |
| 80 | R | A | -1.0221 | |
| 81 | S | A | 0.0000 | |
| 82 | W | A | 1.1054 | |
| 83 | S | A | 0.1560 | |
| 84 | L | A | 0.0490 | |
| 85 | S | A | 0.6762 | |
| 86 | A | A | 1.0794 | |
| 87 | I | A | 1.9199 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.2498 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -1.7449 | |
| 92 | G | A | -2.3131 | |
| 93 | H | A | -2.3946 | |
| 94 | H | A | -2.6227 | |
| 95 | H | A | -2.8299 | |
| 96 | H | A | -2.6626 | |
| 97 | H | A | -2.2730 | |
| 98 | H | A | -1.6369 | |
| 99 | C | A | -0.1838 |