Project name: query_structure

Status: done

Started: 2026-03-17 01:29:47
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYYQGGWYVSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:43)
Show buried residues

Minimal score value
-2.6407
Maximal score value
2.0715
Average score
-0.2631
Total score value
-24.2029

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6783
2 S A 0.6035
3 S A 0.5821
4 V A 0.1707
5 P A 0.0000
6 T A -1.6033
7 K A -2.6407
8 L A 0.0000
9 E A -1.9441
10 V A 0.0845
11 V A 1.5146
12 A A 0.8706
13 A A 0.2836
14 T A -0.3981
15 P A -0.8141
16 T A -0.5414
17 S A -0.3375
18 L A 0.0000
19 L A 0.6908
20 I A 0.0000
21 S A -0.7836
22 W A 0.0000
23 D A -2.5671
24 A A -1.2021
25 S A -0.6131
26 S A -0.3264
27 S A -0.2017
28 S A 0.3737
29 V A 0.7479
30 S A 0.5407
31 Y A 0.5317
32 Y A 0.0000
33 R A -0.4781
34 I A 0.0000
35 T A 0.0000
36 Y A 0.0000
37 G A 0.0000
38 E A -1.2470
39 T A -1.1833
40 G A -1.1982
41 G A -1.2933
42 N A -1.5023
43 S A -0.7980
44 P A -0.2921
45 V A 0.4742
46 Q A -0.7719
47 E A -1.6126
48 F A -0.6354
49 T A -0.1938
50 V A 0.0793
51 P A -0.1700
52 G A 0.0211
53 S A -0.2882
54 S A -0.3731
55 S A -0.5984
56 T A -0.2629
57 A A 0.0000
58 T A 0.2946
59 I A 0.0000
60 S A -0.4834
61 G A -0.6902
62 L A 0.0000
63 S A -0.8299
64 P A -0.9909
65 G A -1.0621
66 V A -0.8916
67 D A -1.7954
68 Y A 0.0000
69 T A -0.7870
70 I A 0.0000
71 T A -0.2072
72 V A 0.0000
73 Y A 0.4081
74 A A 0.0000
75 Y A 0.0000
76 Y A 1.9085
77 Y A 1.5083
78 Q A -0.4696
79 G A -0.0902
80 G A 0.6921
81 W A 1.8947
82 Y A 2.0715
83 V A 0.0000
84 S A 0.3358
85 P A 0.2091
86 I A 0.0723
87 S A -0.3657
88 I A -0.7063
89 N A -1.7097
90 Y A -1.4121
91 R A -2.3073
92 T A -1.1748
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Laboratory of Theory of Biopolymers 2018