| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHDGADVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPSGPPPSPLYTPPAPGSPTATPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPVPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9505 | |
| 2 | L | A | 1.9710 | |
| 3 | P | A | 0.6552 | |
| 4 | P | A | 0.3615 | |
| 5 | T | A | 0.1198 | |
| 6 | T | A | 0.1255 | |
| 7 | P | A | 0.1825 | |
| 8 | V | A | 1.2246 | |
| 9 | A | A | 0.0367 | |
| 10 | K | A | -1.1563 | |
| 11 | V | A | -0.3958 | |
| 12 | Q | A | -1.5175 | |
| 13 | S | A | -1.6086 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4634 | |
| 16 | E | A | -2.4575 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4492 | |
| 20 | P | A | 0.1007 | |
| 21 | T | A | 0.1154 | |
| 22 | S | A | -0.1683 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0964 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1262 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6035 | |
| 31 | R | A | -2.5594 | |
| 32 | L | A | -0.7451 | |
| 33 | L | A | 1.1566 | |
| 34 | T | A | 1.3719 | |
| 35 | V | A | 1.8971 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2574 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6234 | |
| 40 | K | A | -1.6366 | |
| 41 | D | A | -0.9241 | |
| 42 | I | A | 0.8261 | |
| 43 | V | A | 0.9012 | |
| 44 | K | A | -1.4319 | |
| 45 | D | A | -2.4413 | |
| 46 | G | A | -1.4808 | |
| 47 | K | A | -1.0978 | |
| 48 | V | A | 1.4193 | |
| 49 | V | A | 1.9921 | |
| 50 | V | A | 1.3059 | |
| 51 | P | A | 0.4992 | |
| 52 | K | A | -0.6204 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1392 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4656 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2955 | |
| 70 | K | A | -1.8087 | |
| 71 | F | A | -0.6633 | |
| 72 | A | A | -0.5747 | |
| 73 | L | A | -0.8669 | |
| 74 | P | A | -1.2636 | |
| 75 | Q | A | -2.4775 | |
| 76 | K | A | -3.0958 | |
| 77 | D | A | -2.9911 | |
| 78 | F | A | -1.6480 | |
| 79 | Y | A | -1.9220 | |
| 80 | D | A | -2.7617 | |
| 81 | P | A | -2.3511 | |
| 82 | E | A | -3.0707 | |
| 83 | K | A | -3.4424 | |
| 84 | E | A | -2.5057 | |
| 85 | R | A | -1.3147 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6320 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9544 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3360 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7550 | |
| 99 | G | A | -0.5526 | |
| 100 | P | A | -0.4050 | |
| 101 | L | A | 0.0092 | |
| 102 | G | A | -0.2067 | |
| 103 | K | A | -0.6032 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4330 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0979 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2974 | |
| 110 | L | A | 0.3018 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0195 | |
| 113 | K | A | -0.4957 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3836 | |
| 117 | T | A | -1.2383 | |
| 118 | E | A | -2.5915 | |
| 119 | N | A | -2.3414 | |
| 120 | P | A | -1.6753 | |
| 121 | T | A | -0.9445 | |
| 122 | A | A | -0.7027 | |
| 123 | P | A | -0.8848 | |
| 124 | Q | A | -1.7556 | |
| 125 | H | A | -2.3098 | |
| 126 | D | A | -2.9463 | |
| 127 | G | A | -2.2026 | |
| 128 | A | A | -1.4100 | |
| 129 | D | A | -2.1605 | |
| 130 | V | A | -1.5036 | |
| 131 | R | A | -0.8660 | |
| 132 | V | A | 0.2152 | |
| 133 | S | A | 0.1539 | |
| 134 | F | A | 0.1345 | |
| 135 | S | A | -0.1352 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5175 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5619 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2649 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1386 | |
| 157 | D | A | 0.3085 | |
| 158 | L | A | 0.7821 | |
| 159 | A | A | 0.1728 | |
| 160 | E | A | -1.4392 | |
| 161 | P | A | -0.1902 | |
| 162 | C | A | 0.1986 | |
| 163 | P | A | -0.1595 | |
| 164 | G | A | -0.0657 | |
| 165 | L | A | 0.6031 | |
| 166 | P | A | -0.1102 | |
| 167 | P | A | -0.3390 | |
| 168 | G | A | -0.4157 | |
| 169 | A | A | -0.0146 | |
| 170 | C | A | 0.6844 | |
| 171 | P | A | 0.5456 | |
| 172 | P | A | 0.8083 | |
| 173 | I | A | 2.0526 | |
| 174 | Q | A | 0.8678 | |
| 175 | L | A | 1.4869 | |
| 176 | V | A | 0.8429 | |
| 177 | N | A | -0.3524 | |
| 178 | S | A | 0.0010 | |
| 179 | V | A | 0.3819 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3681 | |
| 182 | D | A | 0.0812 | |
| 183 | G | A | -0.1544 | |
| 184 | D | A | -0.5762 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1435 | |
| 190 | F | A | 0.0559 | |
| 191 | G | A | -0.1063 | |
| 192 | N | A | -0.2921 | |
| 193 | M | A | -0.1605 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4488 | |
| 197 | E | A | -2.6455 | |
| 198 | L | A | -1.2238 | |
| 199 | Q | A | -2.5451 | |
| 200 | Q | A | -3.3585 | |
| 201 | D | A | -3.6085 | |
| 202 | R | A | -3.3516 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1987 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3971 | |
| 211 | S | A | -1.9201 | |
| 212 | T | A | -1.4991 | |
| 213 | R | A | -2.2123 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1839 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2749 | |
| 220 | L | A | 0.4746 | |
| 221 | K | A | -1.3654 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9808 | |
| 224 | N | A | -1.5969 | |
| 225 | E | A | -1.3411 | |
| 226 | A | A | -0.6693 | |
| 227 | Y | A | -0.4533 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7152 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1323 | |
| 234 | F | A | 0.0370 | |
| 235 | G | A | -0.8956 | |
| 236 | R | A | -2.6222 | |
| 237 | R | A | -2.8278 | |
| 238 | E | A | -2.0840 | |
| 239 | Q | A | -0.1298 | |
| 240 | V | A | 1.4933 | |
| 241 | Y | A | 1.2261 | |
| 242 | A | A | 0.1580 | |
| 243 | R | A | -1.3259 | |
| 244 | H | A | -1.1534 | |
| 245 | F | A | -0.1498 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7542 | |
| 249 | A | A | -1.4255 | |
| 250 | G | A | -1.1693 | |
| 251 | P | A | -1.1597 | |
| 252 | E | A | -1.3492 | |
| 253 | G | A | -1.2675 | |
| 254 | H | A | -1.4638 | |
| 255 | P | A | -1.0442 | |
| 256 | L | A | 0.0736 | |
| 257 | P | A | -0.1286 | |
| 258 | S | A | -0.2411 | |
| 259 | G | A | -0.5608 | |
| 260 | P | A | -0.6389 | |
| 261 | P | A | -0.4968 | |
| 262 | P | A | -0.3456 | |
| 263 | S | A | 0.0703 | |
| 264 | P | A | 0.4101 | |
| 265 | L | A | 1.5133 | |
| 266 | Y | A | 0.8672 | |
| 267 | T | A | 0.1112 | |
| 268 | P | A | -0.1509 | |
| 269 | P | A | -0.2875 | |
| 270 | A | A | -0.3085 | |
| 271 | P | A | -0.5330 | |
| 272 | G | A | -0.6770 | |
| 273 | S | A | -0.4978 | |
| 274 | P | A | -0.5176 | |
| 275 | T | A | -0.4415 | |
| 276 | A | A | -0.3869 | |
| 277 | T | A | -0.3249 | |
| 278 | P | A | -0.2460 | |
| 279 | P | A | -1.0123 | |
| 280 | P | A | -0.8482 | |
| 281 | T | A | -0.4227 | |
| 282 | D | A | -0.8923 | |
| 283 | Y | A | 0.9129 | |
| 284 | F | A | 0.7156 | |
| 285 | G | A | 0.1361 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9416 | |
| 291 | L | A | 1.6496 | |
| 292 | V | A | 0.6687 | |
| 293 | S | A | -0.1475 | |
| 294 | S | A | -0.9684 | |
| 295 | D | A | -1.8375 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1131 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6238 | |
| 301 | R | A | -1.8712 | |
| 302 | P | A | -0.9629 | |
| 303 | F | A | -0.1776 | |
| 304 | W | A | -0.5157 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0778 | |
| 307 | R | A | -2.9263 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6531 | |
| 310 | G | A | -1.4125 | |
| 311 | N | A | -1.3881 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9096 | |
| 319 | N | A | -0.8834 | |
| 320 | E | A | -1.0493 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3755 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1697 | |
| 333 | N | A | 0.3755 | |
| 334 | F | A | 1.4139 | |
| 335 | T | A | 0.7353 | |
| 336 | I | A | 0.3980 | |
| 337 | S | A | -0.9775 | |
| 338 | Q | A | -1.7488 | |
| 339 | Q | A | -1.1632 | |
| 340 | L | A | 0.7093 | |
| 341 | C | A | 0.6021 | |
| 342 | T | A | 0.4371 | |
| 343 | P | A | 0.1957 | |
| 344 | V | A | 1.1004 | |
| 345 | P | A | 0.5500 | |
| 346 | N | A | -0.0111 | |
| 347 | V | A | 1.6982 | |
| 348 | Y | A | 1.5822 | |
| 349 | D | A | 0.1806 | |
| 350 | P | A | -0.4111 | |
| 351 | S | A | -0.3564 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7268 | |
| 354 | K | A | -1.8280 | |
| 355 | N | A | -1.7732 | |
| 356 | Y | A | -0.1051 | |
| 357 | L | A | 0.5658 | |
| 358 | R | A | 0.8463 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1838 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.1490 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9018 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6374 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3100 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3264 | |
| 376 | L | A | -1.7604 | |
| 377 | D | A | -2.0533 | |
| 378 | P | A | -1.0731 | |
| 379 | G | A | -1.0257 | |
| 380 | V | A | -0.9367 | |
| 381 | L | A | -0.5434 | |
| 382 | A | A | -0.6580 | |
| 383 | H | A | -0.8432 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3879 | |
| 386 | T | A | -0.5687 | |
| 387 | M | A | -0.3259 | |
| 388 | N | A | -0.8597 | |
| 389 | P | A | -1.2737 | |
| 390 | T | A | -1.5295 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5251 | |
| 393 | E | A | -2.9038 | |
| 394 | N | A | -2.6775 | |
| 395 | W | A | -1.5091 | |
| 396 | N | A | -1.1332 | |
| 397 | L | A | -0.1802 | |
| 398 | G | A | 0.5502 | |
| 399 | F | A | 2.4364 | |
| 400 | V | A | 1.8606 | |
| 401 | P | A | 0.0719 | |
| 402 | P | A | -1.8851 | |
| 403 | K | A | -3.3865 | |
| 404 | E | A | -3.8204 | |
| 405 | R | A | -4.0681 | |
| 406 | E | A | -3.8154 | |
| 407 | D | A | -2.8556 | |
| 408 | P | A | -1.7534 | |
| 409 | Y | A | -0.9832 | |
| 410 | K | A | -2.0931 | |
| 411 | G | A | -0.6334 | |
| 412 | L | A | 0.6623 | |
| 413 | I | A | 1.5766 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3937 | |
| 416 | E | A | -1.6707 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8711 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9307 | |
| 421 | E | A | -2.5677 | |
| 422 | R | A | -2.1819 | |
| 423 | F | A | -1.0830 | |
| 424 | S | A | -1.3533 | |
| 425 | Q | A | -1.8685 | |
| 426 | D | A | -2.9112 | |
| 427 | L | A | -2.0275 | |
| 428 | D | A | -2.8433 | |
| 429 | Q | A | -2.6409 | |
| 430 | F | A | -1.4641 | |
| 431 | A | A | -0.9257 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6358 | |
| 435 | K | A | -0.7605 | |
| 436 | F | A | 0.1245 | |
| 437 | L | A | 1.0062 | |
| 438 | Y | A | 0.8077 | |
| 439 | Q | A | -0.2760 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine