| Chain sequence(s) |
A: GSARDDVLIGDAGANVLRGLAGNDVLSGGAGDDWLWGDEGSDLLSGDAGNDVLCGGQGDDTYLFGVGYGHDSIRESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7707 | |
| 2 | S | A | -1.0051 | |
| 3 | A | A | -1.5396 | |
| 4 | R | A | -2.8374 | |
| 5 | D | A | -2.7718 | |
| 6 | D | A | -0.6792 | |
| 7 | V | A | 1.7852 | |
| 8 | L | A | 1.7821 | |
| 9 | I | A | 2.1850 | |
| 10 | G | A | 0.3117 | |
| 11 | D | A | -1.4745 | |
| 12 | A | A | -1.2288 | |
| 13 | G | A | -1.0459 | |
| 14 | A | A | -0.7620 | |
| 15 | N | A | 0.2005 | |
| 16 | V | A | 1.5161 | |
| 17 | L | A | 1.0101 | |
| 18 | R | A | -0.4648 | |
| 19 | G | A | 0.0000 | |
| 20 | L | A | -0.8906 | |
| 21 | A | A | -1.8752 | |
| 22 | G | A | -2.4942 | |
| 23 | N | A | -2.4685 | |
| 24 | D | A | 0.0000 | |
| 25 | V | A | 1.2700 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | 1.0933 | |
| 28 | G | A | 0.0000 | |
| 29 | G | A | -0.6455 | |
| 30 | A | A | -1.2127 | |
| 31 | G | A | -1.5969 | |
| 32 | D | A | -2.0105 | |
| 33 | D | A | 0.0000 | |
| 34 | W | A | 0.6990 | |
| 35 | L | A | 0.0000 | |
| 36 | W | A | -0.0733 | |
| 37 | G | A | 0.0000 | |
| 38 | D | A | -1.7168 | |
| 39 | E | A | -2.6822 | |
| 40 | G | A | -2.5823 | |
| 41 | S | A | -2.1274 | |
| 42 | D | A | 0.0000 | |
| 43 | L | A | 0.5398 | |
| 44 | L | A | 0.0000 | |
| 45 | S | A | 0.0000 | |
| 46 | G | A | 0.0000 | |
| 47 | D | A | -0.5346 | |
| 48 | A | A | -0.6556 | |
| 49 | G | A | -1.5128 | |
| 50 | N | A | -1.8648 | |
| 51 | D | A | 0.0000 | |
| 52 | V | A | -0.2227 | |
| 53 | L | A | 0.0000 | |
| 54 | C | A | -0.6211 | |
| 55 | G | A | 0.0000 | |
| 56 | G | A | -1.8033 | |
| 57 | Q | A | -2.7684 | |
| 58 | G | A | -2.6327 | |
| 59 | D | A | -2.8553 | |
| 60 | D | A | 0.0000 | |
| 61 | T | A | -0.5334 | |
| 62 | Y | A | 0.0000 | |
| 63 | L | A | -0.5640 | |
| 64 | F | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | V | A | 0.9662 | |
| 67 | G | A | 0.0254 | |
| 68 | Y | A | -0.2017 | |
| 69 | G | A | -1.1551 | |
| 70 | H | A | -1.7473 | |
| 71 | D | A | 0.0000 | |
| 72 | S | A | -0.7134 | |
| 73 | I | A | 0.0000 | |
| 74 | R | A | -1.7696 | |
| 75 | E | A | 0.0000 | |
| 76 | S | A | -1.5802 | |
| 77 | G | A | -1.9281 | |
| 78 | G | A | -2.0695 | |
| 79 | G | A | -2.3239 | |
| 80 | H | A | -2.2696 | |
| 81 | D | A | 0.0000 | |
| 82 | T | A | -1.4058 | |
| 83 | I | A | 0.0000 | |
| 84 | R | A | -2.3516 | |
| 85 | I | A | 0.0000 | |
| 86 | N | A | -1.5330 | |
| 87 | A | A | 0.0000 | |
| 88 | G | A | -1.8041 | |
| 89 | A | A | -1.7527 | |
| 90 | D | A | -2.2295 | |
| 91 | Q | A | -2.0033 | |
| 92 | L | A | 0.0000 | |
| 93 | W | A | -0.5106 | |
| 94 | F | A | 0.0000 | |
| 95 | A | A | -1.5996 | |
| 96 | R | A | -2.8276 | |
| 97 | Q | A | -2.6181 | |
| 98 | G | A | -2.3923 | |
| 99 | N | A | -3.0400 | |
| 100 | D | A | -2.5884 | |
| 101 | L | A | 0.0000 | |
| 102 | E | A | -1.5427 | |
| 103 | I | A | 0.0000 | |
| 104 | R | A | -1.4186 | |
| 105 | I | A | 0.0000 | |
| 106 | L | A | -0.3133 | |
| 107 | G | A | -0.5402 | |
| 108 | T | A | -0.8707 | |
| 109 | D | A | -1.8826 | |
| 110 | D | A | 0.0000 | |
| 111 | A | A | 0.0000 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | -1.1616 | |
| 114 | V | A | 0.0000 | |
| 115 | H | A | -2.0970 | |
| 116 | D | A | -2.8970 | |
| 117 | W | A | 0.0000 | |
| 118 | Y | A | -2.2982 | |
| 119 | R | A | -3.0366 | |
| 120 | D | A | -2.2107 | |
| 121 | A | A | -1.8626 | |
| 122 | D | A | -2.8235 | |
| 123 | H | A | -2.5939 | |
| 124 | R | A | -2.2879 | |
| 125 | V | A | 0.0000 | |
| 126 | E | A | -2.6094 | |
| 127 | I | A | -1.6371 | |
| 128 | I | A | 0.0000 | |
| 129 | H | A | -1.9099 | |
| 130 | A | A | 0.0000 | |
| 131 | A | A | -1.8012 | |
| 132 | N | A | -2.2161 | |
| 133 | Q | A | -2.0962 | |
| 134 | A | A | -1.3722 | |
| 135 | V | A | -1.3828 | |
| 136 | D | A | -2.4917 | |
| 137 | Q | A | -2.2450 | |
| 138 | A | A | -1.5239 | |
| 139 | G | A | -1.6060 | |
| 140 | I | A | 0.0000 | |
| 141 | E | A | -2.2056 | |
| 142 | K | A | -2.4074 | |
| 143 | L | A | -1.0933 | |
| 144 | V | A | 0.0000 | |
| 145 | E | A | -2.6264 | |
| 146 | A | A | -1.2643 | |
| 147 | M | A | -0.8660 | |
| 148 | A | A | -1.2314 | |
| 149 | Q | A | -1.1298 | |
| 150 | Y | A | 0.0147 | |
| 151 | P | A | -0.7388 | |
| 152 | D | A | -1.6797 |