| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARHSGQNHLKEMAISVLEARACAAAGQILPQAPSGPSYATYLQPAQAQMLTPLRTAAYVNAIEKIFKVYNEAGVTFTKPLRRNNSYTSYIMAICGMPLDSFRSWIHCWKYLSVQSQLFRGSSLLFRRVIQTSKYYMRDVIAIESAWLLELAPYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25)
[INFO] Main: Simulation completed successfully. (00:02:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1946 | |
| 2 | D | A | -1.0978 | |
| 3 | A | A | -0.7640 | |
| 4 | M | A | -0.7152 | |
| 5 | K | A | -2.3288 | |
| 6 | R | A | -2.2142 | |
| 7 | G | A | -1.0833 | |
| 8 | L | A | 0.5417 | |
| 9 | C | A | 1.2899 | |
| 10 | C | A | 1.4268 | |
| 11 | V | A | 1.6606 | |
| 12 | L | A | 1.8297 | |
| 13 | L | A | 2.0856 | |
| 14 | L | A | 2.3585 | |
| 15 | C | A | 2.0915 | |
| 16 | G | A | 1.5237 | |
| 17 | A | A | 2.0616 | |
| 18 | V | A | 3.1848 | |
| 19 | F | A | 3.5319 | |
| 20 | V | A | 2.3678 | |
| 21 | S | A | 0.6284 | |
| 22 | P | A | -0.4912 | |
| 23 | S | A | -1.0080 | |
| 24 | Q | A | -1.9449 | |
| 25 | E | A | -2.2940 | |
| 26 | I | A | -1.0497 | |
| 27 | H | A | -2.0964 | |
| 28 | A | A | -2.3197 | |
| 29 | R | A | -3.0326 | |
| 30 | H | A | -2.4551 | |
| 31 | S | A | -2.1221 | |
| 32 | G | A | -2.2507 | |
| 33 | Q | A | -2.6815 | |
| 34 | N | A | -2.6832 | |
| 35 | H | A | -2.0906 | |
| 36 | L | A | -0.4572 | |
| 37 | K | A | -2.0863 | |
| 38 | E | A | -1.8574 | |
| 39 | M | A | 0.2237 | |
| 40 | A | A | 0.4937 | |
| 41 | I | A | 0.9801 | |
| 42 | S | A | 0.0496 | |
| 43 | V | A | 0.5268 | |
| 44 | L | A | 0.6065 | |
| 45 | E | A | -0.7700 | |
| 46 | A | A | -0.3757 | |
| 47 | R | A | -1.6233 | |
| 48 | A | A | -1.2089 | |
| 49 | C | A | -0.4594 | |
| 50 | A | A | -0.4084 | |
| 51 | A | A | -0.7838 | |
| 52 | A | A | -0.3609 | |
| 53 | G | A | -0.2769 | |
| 54 | Q | A | 0.0461 | |
| 55 | I | A | 1.6825 | |
| 56 | L | A | 1.1708 | |
| 57 | P | A | -0.0084 | |
| 58 | Q | A | -0.8644 | |
| 59 | A | A | -0.4817 | |
| 60 | P | A | -0.6770 | |
| 61 | S | A | -0.6254 | |
| 62 | G | A | -0.5854 | |
| 63 | P | A | -0.3388 | |
| 64 | S | A | 0.3787 | |
| 65 | Y | A | 1.4685 | |
| 66 | A | A | 0.9206 | |
| 67 | T | A | 0.8380 | |
| 68 | Y | A | 1.4536 | |
| 69 | L | A | 0.4844 | |
| 70 | Q | A | -0.9969 | |
| 71 | P | A | -0.8105 | |
| 72 | A | A | -0.6947 | |
| 73 | Q | A | -0.5410 | |
| 74 | A | A | -0.4952 | |
| 75 | Q | A | -0.9966 | |
| 76 | M | A | -0.0248 | |
| 77 | L | A | -0.2083 | |
| 78 | T | A | -0.7792 | |
| 79 | P | A | -0.4924 | |
| 80 | L | A | -0.2312 | |
| 81 | R | A | -1.2464 | |
| 82 | T | A | -0.3513 | |
| 83 | A | A | 0.2922 | |
| 84 | A | A | 0.1262 | |
| 85 | Y | A | 1.0344 | |
| 86 | V | A | 1.2108 | |
| 87 | N | A | -0.6496 | |
| 88 | A | A | -0.1508 | |
| 89 | I | A | 0.3009 | |
| 90 | E | A | -1.3920 | |
| 91 | K | A | -1.6814 | |
| 92 | I | A | 0.0136 | |
| 93 | F | A | -0.5137 | |
| 94 | K | A | -2.0404 | |
| 95 | V | A | 0.0861 | |
| 96 | Y | A | -0.0208 | |
| 97 | N | A | -1.5463 | |
| 98 | E | A | -1.8885 | |
| 99 | A | A | -0.6770 | |
| 100 | G | A | -0.6236 | |
| 101 | V | A | 0.7299 | |
| 102 | T | A | 0.1356 | |
| 103 | F | A | 1.0069 | |
| 104 | T | A | -0.3552 | |
| 105 | K | A | -1.5353 | |
| 106 | P | A | -1.2765 | |
| 107 | L | A | -0.4843 | |
| 108 | R | A | -2.8754 | |
| 109 | R | A | -3.2191 | |
| 110 | N | A | -2.9415 | |
| 111 | N | A | -2.3572 | |
| 112 | S | A | -0.8719 | |
| 113 | Y | A | 0.5633 | |
| 114 | T | A | 0.6169 | |
| 115 | S | A | 1.1869 | |
| 116 | Y | A | 2.2192 | |
| 117 | I | A | 2.6518 | |
| 118 | M | A | 2.0206 | |
| 119 | A | A | 1.3504 | |
| 120 | I | A | 1.1854 | |
| 121 | C | A | 1.1438 | |
| 122 | G | A | 0.2497 | |
| 123 | M | A | 0.3737 | |
| 124 | P | A | 0.0889 | |
| 125 | L | A | 0.5110 | |
| 126 | D | A | -1.4467 | |
| 127 | S | A | -0.8822 | |
| 128 | F | A | -0.6649 | |
| 129 | R | A | -2.0872 | |
| 130 | S | A | -0.4413 | |
| 131 | W | A | 0.4070 | |
| 132 | I | A | 0.4422 | |
| 133 | H | A | -0.6030 | |
| 134 | C | A | 0.0000 | |
| 135 | W | A | 0.2404 | |
| 136 | K | A | -0.7571 | |
| 137 | Y | A | 0.2366 | |
| 138 | L | A | 0.0000 | |
| 139 | S | A | 0.2468 | |
| 140 | V | A | 1.0308 | |
| 141 | Q | A | -0.2012 | |
| 142 | S | A | -0.1703 | |
| 143 | Q | A | 0.2762 | |
| 144 | L | A | 0.5609 | |
| 145 | F | A | 0.7880 | |
| 146 | R | A | -1.3348 | |
| 147 | G | A | -0.9886 | |
| 148 | S | A | -0.1495 | |
| 149 | S | A | 0.1711 | |
| 150 | L | A | 1.5027 | |
| 151 | L | A | 1.8506 | |
| 152 | F | A | 0.7249 | |
| 153 | R | A | -1.4778 | |
| 154 | R | A | -1.7017 | |
| 155 | V | A | -0.2832 | |
| 156 | I | A | 0.5179 | |
| 157 | Q | A | -0.2080 | |
| 158 | T | A | -0.0180 | |
| 159 | S | A | 0.1094 | |
| 160 | K | A | -0.7144 | |
| 161 | Y | A | 1.1989 | |
| 162 | Y | A | 1.2432 | |
| 163 | M | A | 0.6138 | |
| 164 | R | A | -0.6286 | |
| 165 | D | A | -0.5441 | |
| 166 | V | A | -0.1932 | |
| 167 | I | A | 0.1601 | |
| 168 | A | A | 0.0479 | |
| 169 | I | A | 0.3752 | |
| 170 | E | A | -0.8485 | |
| 171 | S | A | -0.2795 | |
| 172 | A | A | 0.0972 | |
| 173 | W | A | 0.5410 | |
| 174 | L | A | 0.8426 | |
| 175 | L | A | 1.1570 | |
| 176 | E | A | -0.3489 | |
| 177 | L | A | 0.8320 | |
| 178 | A | A | 0.8662 | |
| 179 | P | A | 0.6102 | |
| 180 | Y | A | 0.9827 | |
| 181 | P | A | 0.6793 | |
| 182 | Y | A | 0.7717 | |
| 183 | D | A | -0.6726 | |
| 184 | V | A | 0.6798 | |
| 185 | P | A | -0.3492 | |
| 186 | D | A | -1.0316 | |
| 187 | Y | A | 0.6882 | |
| 188 | A | A | 0.1581 |