| Chain sequence(s) |
A: GKITLYEDRGFEGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4758 | |
| 2 | K | A | -2.2043 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.6932 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.8526 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -2.5792 | |
| 9 | R | A | -2.5382 | |
| 10 | G | A | -1.7067 | |
| 11 | F | A | -1.8415 | |
| 12 | E | A | -2.8980 | |
| 13 | G | A | -2.4813 | |
| 14 | R | A | -2.0463 | |
| 15 | H | A | -1.9221 | |
| 16 | Y | A | -1.1253 | |
| 17 | E | A | -2.1669 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -1.5362 | |
| 20 | S | A | -1.1864 | |
| 21 | D | A | -1.2393 | |
| 22 | H | A | -1.0856 | |
| 23 | P | A | -1.3994 | |
| 24 | N | A | -1.5048 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.6422 | |
| 27 | P | A | -0.5265 | |
| 28 | Y | A | -0.1953 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.1874 | |
| 31 | R | A | -1.9333 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.2345 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -2.9210 | |
| 39 | S | A | -1.5481 | |
| 40 | G | A | -0.9379 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.2716 | |
| 47 | Q | A | -1.6716 | |
| 48 | P | A | -1.5484 | |
| 49 | N | A | -1.6418 | |
| 50 | Y | A | -0.8658 | |
| 51 | S | A | -0.8826 | |
| 52 | G | A | -0.9047 | |
| 53 | L | A | -0.3981 | |
| 54 | Q | A | -0.1406 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.1804 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.1106 | |
| 59 | R | A | -1.9349 | |
| 60 | G | A | -2.0163 | |
| 61 | D | A | -2.5843 | |
| 62 | Y | A | -1.6643 | |
| 63 | A | A | -1.6918 | |
| 64 | D | A | -1.7034 | |
| 65 | H | A | -1.6620 | |
| 66 | Q | A | -1.5412 | |
| 67 | Q | A | -1.6880 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.5493 | |
| 70 | G | A | -0.5836 | |
| 71 | L | A | 0.1376 | |
| 72 | S | A | -0.7516 | |
| 73 | D | A | -2.0301 | |
| 74 | S | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.7305 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -0.8662 | |
| 80 | L | A | -0.6662 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.7275 | |
| 83 | H | A | -0.9744 | |
| 84 | S | A | -0.9282 | |
| 85 | G | A | -0.8379 | |
| 86 | S | A | -1.1561 | |
| 87 | H | A | 0.0000 | |
| 88 | R | A | -2.3018 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.7233 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -2.7027 | |
| 94 | R | A | -4.4095 | |
| 95 | E | A | -4.2001 | |
| 96 | D | A | -3.7681 | |
| 97 | Y | A | -2.6109 | |
| 98 | R | A | -3.3976 | |
| 99 | G | A | -2.7638 | |
| 100 | Q | A | -1.9589 | |
| 101 | M | A | -1.2439 | |
| 102 | I | A | -1.2810 | |
| 103 | E | A | -2.4260 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.2254 | |
| 106 | E | A | -2.7803 | |
| 107 | D | A | -1.9850 | |
| 108 | C | A | -1.6182 | |
| 109 | S | A | -1.2681 | |
| 110 | C | A | -1.1291 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.5327 | |
| 113 | D | A | -3.3217 | |
| 114 | R | A | -3.3169 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.7177 | |
| 117 | F | A | -1.2205 | |
| 118 | N | A | -1.5420 | |
| 119 | E | A | -2.4927 | |
| 120 | I | A | 0.0000 | |
| 121 | H | A | -3.2890 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.6560 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -0.8090 | |
| 127 | E | A | -1.0800 | |
| 128 | G | A | -0.9625 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.1811 | |
| 135 | L | A | -0.5251 | |
| 136 | S | A | -0.8185 | |
| 137 | N | A | -1.5761 | |
| 138 | Y | A | -1.2448 | |
| 139 | R | A | -1.9583 | |
| 140 | G | A | -1.0153 | |
| 141 | R | A | -0.7058 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.0986 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.2846 | |
| 147 | P | A | -0.8070 | |
| 148 | G | A | -1.2650 | |
| 149 | D | A | -2.5936 | |
| 150 | Y | A | -2.7420 | |
| 151 | R | A | -4.1773 | |
| 152 | R | A | -4.0024 | |
| 153 | Y | A | -2.3831 | |
| 154 | Q | A | -2.3609 | |
| 155 | D | A | -2.4631 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.3727 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.9502 | |
| 160 | N | A | -1.5435 | |
| 161 | A | A | 0.0000 | |
| 162 | R | A | -1.7259 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.2567 | |
| 168 | R | A | -1.2809 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.1371 | |
| 171 | D | A | 0.0558 | |
| 172 | F | A | 1.1400 | |
| 173 | S | A | 0.5092 |