Project name: query_structure

Status: done

Started: 2026-03-16 21:43:40
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIAGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:49)
Show buried residues

Minimal score value
-3.125
Maximal score value
1.4414
Average score
-0.6731
Total score value
-60.5816

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0887
2 L A 0.4982
3 P A -0.1122
4 A A -0.4747
5 P A 0.0000
6 K A -1.8794
7 N A -1.4846
8 L A -0.0190
9 V A 0.9394
10 V A 0.0517
11 S A -0.6312
12 R A -2.0394
13 V A -1.1124
14 T A -1.8532
15 E A -3.1250
16 D A -2.8668
17 S A -2.1306
18 A A 0.0000
19 R A -1.1821
20 L A 0.0000
21 S A -0.3284
22 W A 0.0000
23 T A -1.3025
24 A A -1.4103
25 P A -1.3786
26 D A -2.2672
27 A A -1.4289
28 A A 0.0000
29 F A 0.0000
30 D A -2.4451
31 S A 0.0000
32 F A 0.0000
33 N A -0.6074
34 I A 0.0000
35 A A 0.0000
36 Y A 0.5169
37 W A -0.0106
38 E A -0.7592
39 P A -0.4060
40 G A 0.2444
41 I A 1.4414
42 A A 0.3991
43 G A -0.3068
44 E A -1.1932
45 A A 0.1724
46 I A 1.0901
47 W A 1.1005
48 L A 0.1363
49 R A -1.5557
50 V A 0.0000
51 P A -1.5521
52 G A 0.0000
53 S A -1.6133
54 E A -1.5626
55 R A -1.1530
56 S A -0.6167
57 Y A -0.8436
58 D A -1.5390
59 L A 0.0000
60 T A -1.3387
61 G A -1.5287
62 L A 0.0000
63 K A -3.1144
64 P A -2.6080
65 G A -1.9252
66 T A -2.0196
67 E A -2.3998
68 Y A 0.0000
69 K A -0.9440
70 V A 0.0000
71 W A 1.0252
72 I A 0.0000
73 H A -0.3162
74 G A 0.0000
75 V A -1.1999
76 K A -1.7024
77 G A -1.4074
78 G A -1.1260
79 A A -0.6140
80 S A -0.5423
81 S A 0.0000
82 P A 0.2258
83 P A 0.1718
84 L A 0.4898
85 I A 1.1315
86 A A 0.0690
87 R A -1.6687
88 F A 0.0000
89 T A -1.7303
90 T A -1.9974
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Laboratory of Theory of Biopolymers 2018