| Chain sequence(s) |
B: AEKELKKLSKEAFAEFKAAAEAIKAGDLEAAEAEFKALGKLMAEMKKLAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:00)
[INFO] Main: Simulation completed successfully. (00:02:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -1.9675 | |
| 2 | E | B | -3.5182 | |
| 3 | K | B | -4.0931 | |
| 4 | E | B | -3.8443 | |
| 5 | L | B | -3.3717 | |
| 6 | K | B | -4.4638 | |
| 7 | K | B | -4.2077 | |
| 8 | L | B | -2.4986 | |
| 9 | S | B | -2.1660 | |
| 10 | K | B | -2.5746 | |
| 11 | E | B | -1.8627 | |
| 12 | A | B | 0.0000 | |
| 13 | F | B | 0.8795 | |
| 14 | A | B | -0.1294 | |
| 15 | E | B | -0.3596 | |
| 16 | F | B | 0.7116 | |
| 17 | K | B | -0.7719 | |
| 18 | A | B | -0.6534 | |
| 19 | A | B | 0.0000 | |
| 20 | A | B | -1.1578 | |
| 21 | E | B | -2.3353 | |
| 22 | A | B | 0.0000 | |
| 23 | I | B | -0.8570 | |
| 24 | K | B | -1.9196 | |
| 25 | A | B | -1.2476 | |
| 26 | G | B | -1.1677 | |
| 27 | D | B | -1.5831 | |
| 28 | L | B | -0.4726 | |
| 29 | E | B | -1.7636 | |
| 30 | A | B | -1.4059 | |
| 31 | A | B | 0.0000 | |
| 32 | E | B | -1.8406 | |
| 33 | A | B | -1.4503 | |
| 34 | E | B | -1.1981 | |
| 35 | F | B | -0.9330 | |
| 36 | K | B | -2.0284 | |
| 37 | A | B | -1.3373 | |
| 38 | L | B | -0.4556 | |
| 39 | G | B | -1.2268 | |
| 40 | K | B | -2.3010 | |
| 41 | L | B | -1.2804 | |
| 42 | M | B | -1.0467 | |
| 43 | A | B | -1.7654 | |
| 44 | E | B | -2.4134 | |
| 45 | M | B | -1.9490 | |
| 46 | K | B | -2.5302 | |
| 47 | K | B | -2.4665 | |
| 48 | L | B | -1.2785 | |
| 49 | A | B | -1.0958 | |
| 50 | A | B | -0.9165 |