| Chain sequence(s) |
A: MGSSHHHHHHYYLEVDNKFNKEFYNAWWEIRKLPNLNSYQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7606 | |
| 2 | G | A | -0.2297 | |
| 3 | S | A | -0.6906 | |
| 4 | S | A | -1.1853 | |
| 5 | H | A | -2.0383 | |
| 6 | H | A | -2.4496 | |
| 7 | H | A | -2.6105 | |
| 8 | H | A | -2.4184 | |
| 9 | H | A | -1.9012 | |
| 10 | H | A | -0.7234 | |
| 11 | Y | A | 1.0753 | |
| 12 | Y | A | 1.6091 | |
| 13 | L | A | 1.5431 | |
| 14 | E | A | -0.3574 | |
| 15 | V | A | 0.5840 | |
| 16 | D | A | -1.7432 | |
| 17 | N | A | -2.8689 | |
| 18 | K | A | -2.5856 | |
| 19 | F | A | -0.6544 | |
| 20 | N | A | -1.7117 | |
| 21 | K | A | -3.0863 | |
| 22 | E | A | -2.6163 | |
| 23 | F | A | -1.5586 | |
| 24 | Y | A | -0.7904 | |
| 25 | N | A | -1.6294 | |
| 26 | A | A | 0.0000 | |
| 27 | W | A | -1.4251 | |
| 28 | W | A | -1.2604 | |
| 29 | E | A | -2.1932 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -3.4682 | |
| 32 | K | A | -2.9926 | |
| 33 | L | A | 0.0000 | |
| 34 | P | A | -1.7270 | |
| 35 | N | A | -1.5209 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.4279 | |
| 38 | S | A | -1.0113 | |
| 39 | Y | A | 0.0724 | |
| 40 | Q | A | -0.8532 | |
| 41 | K | A | -2.0796 | |
| 42 | E | A | -2.0770 | |
| 43 | A | A | -1.0636 | |
| 44 | F | A | 0.0000 | |
| 45 | K | A | -1.7660 | |
| 46 | T | A | -1.9712 | |
| 47 | S | A | -2.0484 | |
| 48 | L | A | 0.0000 | |
| 49 | K | A | -2.9431 | |
| 50 | D | A | -3.3444 | |
| 51 | D | A | -2.7518 | |
| 52 | P | A | -1.7995 | |
| 53 | S | A | -1.3161 | |
| 54 | Q | A | -1.9395 | |
| 55 | S | A | 0.0000 | |
| 56 | A | A | -1.1671 | |
| 57 | N | A | -1.5943 | |
| 58 | L | A | -1.2951 | |
| 59 | L | A | -1.2867 | |
| 60 | A | A | -1.5310 | |
| 61 | E | A | -2.3262 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.6075 | |
| 64 | K | A | -2.9837 | |
| 65 | L | A | -1.8086 | |
| 66 | N | A | 0.0000 | |
| 67 | D | A | -3.0824 | |
| 68 | A | A | -1.8455 | |
| 69 | Q | A | -1.9132 | |
| 70 | A | A | -1.4783 | |
| 71 | P | A | -1.2429 | |
| 72 | K | A | -1.7686 | |
| 73 | V | A | 0.0113 | |
| 74 | D | A | -1.5038 |