| Chain sequence(s) |
A: MYTFVVRDENSSVYAEVSRLLLATGHWKRLRRDNPRFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADKLCRKASLVKLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPISNSRTDEREFFLASYNRKKEDGEGNVWIAKSSAGAKGEGILISSEASELLDFIDNQGQVHVIQKYLEHPLLLEPGHRKFDIRSWVLVDHQYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGKYEEGNEMFFKEFNQYLTSALNITLESSILLQIKHIIRNCLLSVEPAISTKHLPYQSFQLFGFDFMVDEELKVWLIEVNGAPACAQKLYAELCQGIVDIAISSVFPPPDVEQPQTQPAAFIKL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:45)
[INFO] Main: Simulation completed successfully. (00:04:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7524 | |
| 2 | Y | A | 0.1849 | |
| 3 | T | A | -0.6661 | |
| 4 | F | A | 0.0000 | |
| 5 | V | A | 0.0000 | |
| 6 | V | A | 0.0000 | |
| 7 | R | A | -2.3811 | |
| 8 | D | A | 0.0000 | |
| 9 | E | A | -2.5947 | |
| 10 | N | A | -2.4350 | |
| 11 | S | A | 0.0000 | |
| 12 | S | A | -0.9050 | |
| 13 | V | A | 0.0000 | |
| 14 | Y | A | 0.0000 | |
| 15 | A | A | -1.1868 | |
| 16 | E | A | -0.8565 | |
| 17 | V | A | 0.0000 | |
| 18 | S | A | 0.0000 | |
| 19 | R | A | -1.6925 | |
| 20 | L | A | -0.6500 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | -0.4378 | |
| 23 | A | A | -0.2558 | |
| 24 | T | A | -0.3357 | |
| 25 | G | A | -0.2881 | |
| 26 | H | A | -0.0809 | |
| 27 | W | A | 0.0000 | |
| 28 | K | A | -1.4607 | |
| 29 | R | A | -2.5531 | |
| 30 | L | A | -2.8071 | |
| 31 | R | A | -3.8419 | |
| 32 | R | A | -3.9742 | |
| 33 | D | A | -3.6945 | |
| 34 | N | A | -2.8734 | |
| 35 | P | A | -2.5523 | |
| 36 | R | A | -2.3770 | |
| 37 | F | A | 0.0000 | |
| 38 | N | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | M | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | E | A | -2.3065 | |
| 44 | R | A | -2.8499 | |
| 45 | N | A | -2.9571 | |
| 46 | R | A | -2.7613 | |
| 47 | L | A | -2.0737 | |
| 48 | P | A | -1.4346 | |
| 49 | F | A | -1.1793 | |
| 50 | G | A | -1.5531 | |
| 51 | R | A | -2.3137 | |
| 52 | L | A | 0.0000 | |
| 53 | G | A | -0.8075 | |
| 54 | H | A | -1.8141 | |
| 55 | E | A | -1.3833 | |
| 56 | P | A | -0.7620 | |
| 57 | G | A | -0.4266 | |
| 58 | L | A | 0.3757 | |
| 59 | V | A | 1.4293 | |
| 60 | Q | A | 0.0000 | |
| 61 | L | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | N | A | 0.0000 | |
| 64 | Y | A | -0.7704 | |
| 65 | Y | A | 0.0000 | |
| 66 | R | A | -2.1893 | |
| 67 | G | A | -2.0648 | |
| 68 | A | A | 0.0000 | |
| 69 | D | A | -3.2463 | |
| 70 | K | A | -2.7679 | |
| 71 | L | A | 0.0000 | |
| 72 | C | A | -2.0379 | |
| 73 | R | A | -2.8143 | |
| 74 | K | A | -1.5630 | |
| 75 | A | A | -0.9162 | |
| 76 | S | A | -1.6894 | |
| 77 | L | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | K | A | -1.1880 | |
| 80 | L | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | K | A | -0.9102 | |
| 83 | T | A | -0.4275 | |
| 84 | S | A | -0.9288 | |
| 85 | P | A | -1.6293 | |
| 86 | E | A | -2.3622 | |
| 87 | L | A | 0.0000 | |
| 88 | A | A | -1.5221 | |
| 89 | E | A | -2.4072 | |
| 90 | S | A | -1.4043 | |
| 91 | C | A | -0.7843 | |
| 92 | T | A | -0.2781 | |
| 93 | W | A | -0.0161 | |
| 94 | F | A | 0.1731 | |
| 95 | P | A | 0.0000 | |
| 96 | E | A | -0.6804 | |
| 97 | S | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | P | A | 0.0000 | |
| 103 | T | A | -1.4338 | |
| 104 | N | A | -1.9859 | |
| 105 | L | A | -1.0200 | |
| 106 | K | A | -1.6673 | |
| 107 | T | A | -1.0702 | |
| 108 | P | A | -0.5439 | |
| 109 | V | A | 0.2589 | |
| 110 | A | A | 0.0000 | |
| 111 | P | A | -0.7632 | |
| 112 | A | A | -1.0718 | |
| 113 | Q | A | -2.0216 | |
| 114 | N | A | -1.9693 | |
| 115 | G | A | -1.0060 | |
| 116 | I | A | 0.3498 | |
| 117 | Q | A | -0.6896 | |
| 118 | P | A | -0.1030 | |
| 119 | P | A | 0.3782 | |
| 120 | I | A | 1.3010 | |
| 121 | S | A | -0.0151 | |
| 122 | N | A | -1.3418 | |
| 123 | S | A | -1.4886 | |
| 124 | R | A | -2.2143 | |
| 125 | T | A | -1.0622 | |
| 126 | D | A | 0.0000 | |
| 127 | E | A | 0.0000 | |
| 128 | R | A | -0.3600 | |
| 129 | E | A | -0.9140 | |
| 130 | F | A | 0.0000 | |
| 131 | F | A | 0.0000 | |
| 132 | L | A | -0.4593 | |
| 133 | A | A | -0.7873 | |
| 134 | S | A | 0.0000 | |
| 135 | Y | A | 0.0000 | |
| 136 | N | A | -2.9427 | |
| 137 | R | A | -4.2296 | |
| 138 | K | A | -4.1965 | |
| 139 | K | A | -4.8764 | |
| 140 | E | A | -4.8733 | |
| 141 | D | A | -4.7273 | |
| 142 | G | A | -3.8684 | |
| 143 | E | A | -3.9509 | |
| 144 | G | A | -2.2350 | |
| 145 | N | A | -2.2406 | |
| 146 | V | A | 0.0000 | |
| 147 | W | A | 0.0000 | |
| 148 | I | A | 0.2433 | |
| 149 | A | A | 0.0000 | |
| 150 | K | A | 0.0000 | |
| 151 | S | A | 0.0000 | |
| 152 | S | A | -0.8912 | |
| 153 | A | A | -0.9624 | |
| 154 | G | A | -1.2716 | |
| 155 | A | A | -1.3510 | |
| 156 | K | A | -2.5631 | |
| 157 | G | A | -1.8488 | |
| 158 | E | A | -2.3236 | |
| 159 | G | A | -1.2342 | |
| 160 | I | A | -0.5003 | |
| 161 | L | A | -0.2683 | |
| 162 | I | A | 0.0000 | |
| 163 | S | A | 0.0000 | |
| 164 | S | A | -1.4131 | |
| 165 | E | A | -2.1083 | |
| 166 | A | A | 0.0000 | |
| 167 | S | A | -1.7318 | |
| 168 | E | A | -2.5128 | |
| 169 | L | A | 0.0000 | |
| 170 | L | A | -1.5996 | |
| 171 | D | A | -2.6499 | |
| 172 | F | A | -1.4990 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -2.1860 | |
| 175 | N | A | -2.4060 | |
| 176 | Q | A | -1.8941 | |
| 177 | G | A | -1.5121 | |
| 178 | Q | A | -1.4757 | |
| 179 | V | A | -0.5968 | |
| 180 | H | A | 0.0000 | |
| 181 | V | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | Q | A | 0.0000 | |
| 184 | K | A | -0.5119 | |
| 185 | Y | A | 0.0000 | |
| 186 | L | A | -0.4532 | |
| 187 | E | A | -1.1152 | |
| 188 | H | A | -1.7766 | |
| 189 | P | A | 0.0000 | |
| 190 | L | A | 0.0000 | |
| 191 | L | A | -1.0004 | |
| 192 | L | A | 0.0000 | |
| 193 | E | A | -1.7126 | |
| 194 | P | A | -1.2728 | |
| 195 | G | A | -1.0477 | |
| 196 | H | A | -1.4224 | |
| 197 | R | A | 0.0000 | |
| 198 | K | A | 0.0000 | |
| 199 | F | A | 0.0000 | |
| 200 | D | A | 0.0000 | |
| 201 | I | A | 0.0000 | |
| 202 | R | A | 0.0000 | |
| 203 | S | A | 0.0000 | |
| 204 | W | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | L | A | 0.0000 | |
| 207 | V | A | 0.0000 | |
| 208 | D | A | 0.0000 | |
| 209 | H | A | -1.1543 | |
| 210 | Q | A | -1.7830 | |
| 211 | Y | A | 0.0000 | |
| 212 | N | A | -0.8589 | |
| 213 | I | A | 0.0000 | |
| 214 | Y | A | 0.0000 | |
| 215 | L | A | 0.0000 | |
| 216 | Y | A | 0.0000 | |
| 217 | R | A | -1.8401 | |
| 218 | E | A | 0.0000 | |
| 219 | G | A | 0.0000 | |
| 220 | V | A | 0.0000 | |
| 221 | L | A | 0.0000 | |
| 222 | R | A | -0.6772 | |
| 223 | T | A | 0.0000 | |
| 224 | A | A | 0.0000 | |
| 225 | S | A | 0.0000 | |
| 226 | E | A | -1.0360 | |
| 227 | P | A | -0.9634 | |
| 228 | Y | A | 0.0000 | |
| 229 | H | A | -1.8260 | |
| 230 | V | A | -0.9209 | |
| 231 | D | A | -2.2046 | |
| 232 | N | A | -2.4563 | |
| 233 | F | A | -1.8292 | |
| 234 | Q | A | -2.5191 | |
| 235 | D | A | -2.7421 | |
| 236 | K | A | -1.7411 | |
| 237 | T | A | 0.0000 | |
| 238 | C | A | 0.0000 | |
| 239 | H | A | 0.0000 | |
| 240 | L | A | 0.0000 | |
| 241 | T | A | 0.0000 | |
| 242 | N | A | -1.3228 | |
| 243 | H | A | -1.7687 | |
| 244 | C | A | -1.5728 | |
| 245 | I | A | 0.0000 | |
| 246 | Q | A | 0.0000 | |
| 247 | K | A | -2.6694 | |
| 248 | E | A | -2.5220 | |
| 249 | Y | A | -0.9519 | |
| 250 | S | A | 0.0000 | |
| 251 | K | A | -2.3052 | |
| 252 | N | A | -1.6931 | |
| 253 | Y | A | -1.8658 | |
| 254 | G | A | -2.0876 | |
| 255 | K | A | -2.2677 | |
| 256 | Y | A | -1.2149 | |
| 257 | E | A | -1.6267 | |
| 258 | E | A | -2.3132 | |
| 259 | G | A | -1.7401 | |
| 260 | N | A | 0.0000 | |
| 261 | E | A | -1.0860 | |
| 262 | M | A | -0.9839 | |
| 263 | F | A | -0.9022 | |
| 264 | F | A | 0.0000 | |
| 265 | K | A | -2.6749 | |
| 266 | E | A | -2.6345 | |
| 267 | F | A | 0.0000 | |
| 268 | N | A | -2.1630 | |
| 269 | Q | A | -2.2747 | |
| 270 | Y | A | -1.3614 | |
| 271 | L | A | 0.0000 | |
| 272 | T | A | -0.9046 | |
| 273 | S | A | -0.6513 | |
| 274 | A | A | -0.4193 | |
| 275 | L | A | -0.0562 | |
| 276 | N | A | -0.9942 | |
| 277 | I | A | -0.4836 | |
| 278 | T | A | -0.9082 | |
| 279 | L | A | 0.0000 | |
| 280 | E | A | -1.6220 | |
| 281 | S | A | -0.7365 | |
| 282 | S | A | -0.5748 | |
| 283 | I | A | 0.0000 | |
| 284 | L | A | -0.4864 | |
| 285 | L | A | -0.0540 | |
| 286 | Q | A | -0.6674 | |
| 287 | I | A | 0.0000 | |
| 288 | K | A | -1.0731 | |
| 289 | H | A | -1.3447 | |
| 290 | I | A | 0.0000 | |
| 291 | I | A | 0.0000 | |
| 292 | R | A | -1.1905 | |
| 293 | N | A | -1.2671 | |
| 294 | C | A | 0.0000 | |
| 295 | L | A | 0.0000 | |
| 296 | L | A | -0.1774 | |
| 297 | S | A | -0.5802 | |
| 298 | V | A | 0.0000 | |
| 299 | E | A | -0.4085 | |
| 300 | P | A | -0.3623 | |
| 301 | A | A | -0.5734 | |
| 302 | I | A | 0.0000 | |
| 303 | S | A | -1.2854 | |
| 304 | T | A | 0.0000 | |
| 305 | K | A | -2.3436 | |
| 306 | H | A | -1.5934 | |
| 307 | L | A | -0.5748 | |
| 308 | P | A | -0.4683 | |
| 309 | Y | A | 0.0000 | |
| 310 | Q | A | -0.4759 | |
| 311 | S | A | 0.0000 | |
| 312 | F | A | 0.0000 | |
| 313 | Q | A | 0.0000 | |
| 314 | L | A | 0.0000 | |
| 315 | F | A | 0.0000 | |
| 316 | G | A | 0.0000 | |
| 317 | F | A | 0.0000 | |
| 318 | D | A | 0.0000 | |
| 319 | F | A | 0.0000 | |
| 320 | M | A | 0.0000 | |
| 321 | V | A | 0.0000 | |
| 322 | D | A | -1.9869 | |
| 323 | E | A | -3.0681 | |
| 324 | E | A | -2.9514 | |
| 325 | L | A | -1.5795 | |
| 326 | K | A | -1.4234 | |
| 327 | V | A | 0.0000 | |
| 328 | W | A | 0.1681 | |
| 329 | L | A | 0.0000 | |
| 330 | I | A | 0.2810 | |
| 331 | E | A | -0.4868 | |
| 332 | V | A | 0.0000 | |
| 333 | N | A | -0.9271 | |
| 334 | G | A | -1.1718 | |
| 335 | A | A | -0.4261 | |
| 336 | P | A | -0.1186 | |
| 337 | A | A | -0.1601 | |
| 338 | C | A | 0.0000 | |
| 339 | A | A | 0.0000 | |
| 340 | Q | A | -1.9698 | |
| 341 | K | A | -2.4525 | |
| 342 | L | A | 0.0000 | |
| 343 | Y | A | -1.2969 | |
| 344 | A | A | -1.3587 | |
| 345 | E | A | -2.0341 | |
| 346 | L | A | 0.0000 | |
| 347 | C | A | 0.0000 | |
| 348 | Q | A | -1.2230 | |
| 349 | G | A | 0.0000 | |
| 350 | I | A | 0.0000 | |
| 351 | V | A | 0.0000 | |
| 352 | D | A | -1.0266 | |
| 353 | I | A | 0.0000 | |
| 354 | A | A | 0.0000 | |
| 355 | I | A | 0.0000 | |
| 356 | S | A | -0.3448 | |
| 357 | S | A | -0.6144 | |
| 358 | V | A | 0.2941 | |
| 359 | F | A | 0.0000 | |
| 360 | P | A | -0.9665 | |
| 361 | P | A | -0.8570 | |
| 362 | P | A | -1.0390 | |
| 363 | D | A | -2.0126 | |
| 364 | V | A | -1.3455 | |
| 365 | E | A | -2.5675 | |
| 366 | Q | A | -2.4187 | |
| 367 | P | A | -1.9083 | |
| 368 | Q | A | -2.1583 | |
| 369 | T | A | -1.5006 | |
| 370 | Q | A | -1.7706 | |
| 371 | P | A | -1.2185 | |
| 372 | A | A | -0.4528 | |
| 373 | A | A | -1.0116 | |
| 374 | F | A | 0.0000 | |
| 375 | I | A | -0.7297 | |
| 376 | K | A | -1.4733 | |
| 377 | L | A | -0.6540 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine