| Chain sequence(s) |
A: CKGKGAKCSRLMYDCCTGSCRSGKCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.1107 | |
| 2 | K | A | -1.6387 | |
| 3 | G | A | -2.0682 | |
| 4 | K | A | -3.1464 | |
| 5 | G | A | -2.8708 | |
| 6 | A | A | -2.6553 | |
| 7 | K | A | -3.1750 | |
| 8 | C | A | -2.0226 | |
| 9 | S | A | -1.1012 | |
| 10 | R | A | -1.1781 | |
| 11 | L | A | 0.5452 | |
| 12 | M | A | 1.3987 | |
| 13 | Y | A | 1.4755 | |
| 14 | D | A | 0.0425 | |
| 15 | C | A | -0.8524 | |
| 16 | C | A | 0.0525 | |
| 17 | T | A | -0.4926 | |
| 18 | G | A | -0.6819 | |
| 19 | S | A | -0.5091 | |
| 20 | C | A | -2.0830 | |
| 21 | R | A | -3.1744 | |
| 22 | S | A | -1.9536 | |
| 23 | G | A | -2.4476 | |
| 24 | K | A | -3.8239 | |
| 25 | C | A | 0.0000 | |
| 26 | G | A | -2.2344 |