Project name: e88f4397feee93c

Status: done

Started: 2024-07-05 06:18:53
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Chain sequence(s) A: ELQLVESGGGLVQPGGSLRLSCAASRSIFGIYDMGWFRQAPGKEREWVSSVSNGVAFYADSVKGRFTISRDRAKNSVYLQMNSLRAEDTAVYYCRAVAHSTNTYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-3.6296
Maximal score value
2.1614
Average score
-0.5088
Total score value
-58.5101

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.2354
2 L A -0.9407
3 Q A -0.5823
4 L A 0.5279
5 V A 1.3032
6 E A 0.2930
7 S A -0.5269
8 G A -0.9464
9 G A 0.0381
11 G A 1.0441
12 L A 1.7739
13 V A 0.6692
14 Q A -1.1729
15 P A -1.2417
16 G A -1.4380
17 G A -1.3128
18 S A -1.3829
19 L A -1.2596
20 R A -2.5358
21 L A 0.0000
22 S A -0.5351
23 C A 0.0000
24 A A 0.0213
25 A A -0.2977
26 S A -1.0041
27 R A -1.8137
28 S A -0.9000
29 I A 0.3670
30 F A 1.8108
35 G A 0.9675
36 I A 0.6076
37 Y A 0.1612
38 D A 0.0434
39 M A 0.0000
40 G A 0.0000
41 W A 0.0000
42 F A 0.1609
43 R A 0.0000
44 Q A -1.8973
45 A A -1.7307
46 P A -1.4603
47 G A -1.8614
48 K A -3.4162
49 E A -3.6296
50 R A -2.6404
51 E A -1.8855
52 W A -0.3562
53 V A 0.0000
54 S A 0.0000
55 S A 0.9365
56 V A 0.0000
57 S A 0.1720
58 N A -1.0621
63 G A -0.2868
64 V A 1.5402
65 A A 1.4989
66 F A 2.1614
67 Y A 0.1699
68 A A 0.0000
69 D A -2.2842
70 S A -1.6857
71 V A 0.0000
72 K A -2.1828
74 G A -1.7779
75 R A -1.9720
76 F A 0.0000
77 T A -0.9556
78 I A 0.0000
79 S A -0.4150
80 R A -1.2808
81 D A -1.7104
82 R A -2.1471
83 A A -1.5982
84 K A -2.3915
85 N A -1.6310
86 S A 0.0000
87 V A 0.0000
88 Y A -0.6847
89 L A 0.0000
90 Q A -2.0666
91 M A 0.0000
92 N A -2.4208
93 S A -1.5485
94 L A 0.0000
95 R A -2.1347
96 A A -1.1735
97 E A -1.5898
98 D A 0.0000
99 T A -0.1322
100 A A 0.0000
101 V A 0.7107
102 Y A 0.0000
103 Y A 0.0823
104 C A 0.0000
105 R A 0.1574
106 A A 0.0000
107 V A 0.0406
108 A A 0.0000
109 H A -0.9731
113 S A -0.7582
114 T A -0.7745
115 N A -0.8185
116 T A -0.1287
117 Y A 0.3843
118 W A 0.4841
119 G A -0.0369
120 Q A -0.8665
121 G A -0.2458
122 T A 0.4155
123 L A 1.7993
124 V A 0.0000
125 T A 0.5537
126 V A -0.2005
127 S A -0.2842
128 S A -0.1836
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Laboratory of Theory of Biopolymers 2018