| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGELTGGYMHWVRQAPGKGLEWVGLIIGDEVTIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARFFTKNGEFVAVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
L: DIQMTQSPSSLSASVGDRVTITCKLQKLTGNDGSIMWYQQKPGKAPKVLIYGPTGKKPSGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQLSKDGTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:16)
[INFO] Main: Simulation completed successfully. (00:08:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0219 | |
| 2 | V | H | -1.4246 | |
| 3 | Q | H | -1.1988 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0295 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1978 | |
| 8 | G | H | -0.7727 | |
| 9 | G | H | -0.4788 | |
| 10 | G | H | -0.2503 | |
| 11 | L | H | -0.0489 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.7496 | |
| 14 | P | H | -1.9893 | |
| 15 | G | H | -1.6285 | |
| 16 | G | H | -1.2867 | |
| 17 | S | H | -1.3398 | |
| 18 | L | H | -1.0214 | |
| 19 | R | H | -1.6812 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.2547 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1005 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.1601 | |
| 26 | G | H | -1.5472 | |
| 27 | E | H | -2.4992 | |
| 28 | L | H | 0.0000 | |
| 29 | T | H | -1.3583 | |
| 30 | G | H | -0.7496 | |
| 31 | G | H | 0.0000 | |
| 32 | Y | H | 0.8489 | |
| 33 | M | H | 0.0000 | |
| 34 | H | H | 0.4269 | |
| 35 | W | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | R | H | 0.0000 | |
| 38 | Q | H | -0.7127 | |
| 39 | A | H | -1.1538 | |
| 40 | P | H | -0.9870 | |
| 41 | G | H | -1.4726 | |
| 42 | K | H | -2.3210 | |
| 43 | G | H | -1.5056 | |
| 44 | L | H | 0.0000 | |
| 45 | E | H | -0.7450 | |
| 46 | W | H | 0.0000 | |
| 47 | V | H | 0.0000 | |
| 48 | G | H | 0.0000 | |
| 49 | L | H | 0.8968 | |
| 50 | I | H | 0.0000 | |
| 51 | I | H | 0.2896 | |
| 52 | G | H | -1.3095 | |
| 53 | D | H | -2.7401 | |
| 54 | E | H | -2.2300 | |
| 55 | V | H | 0.0604 | |
| 56 | T | H | 0.4635 | |
| 57 | I | H | 1.0962 | |
| 58 | Y | H | -0.4059 | |
| 59 | D | H | -1.2295 | |
| 60 | P | H | -2.0138 | |
| 61 | K | H | -2.5573 | |
| 62 | F | H | 0.0000 | |
| 63 | Q | H | -2.5411 | |
| 64 | D | H | -2.9584 | |
| 65 | R | H | -2.1289 | |
| 66 | A | H | 0.0000 | |
| 67 | T | H | -0.7974 | |
| 68 | I | H | 0.0000 | |
| 69 | S | H | -0.9099 | |
| 70 | A | H | -1.8259 | |
| 71 | D | H | -2.4885 | |
| 72 | N | H | -3.0397 | |
| 73 | S | H | -2.1431 | |
| 74 | K | H | -2.7565 | |
| 75 | N | H | -2.3271 | |
| 76 | T | H | 0.0000 | |
| 77 | A | H | 0.0000 | |
| 78 | Y | H | -0.4238 | |
| 79 | L | H | 0.0000 | |
| 80 | Q | H | -0.9899 | |
| 81 | M | H | 0.0000 | |
| 82 | N | H | -1.7166 | |
| 83 | S | H | -1.6311 | |
| 84 | L | H | 0.0000 | |
| 85 | R | H | -2.9697 | |
| 86 | A | H | -2.0497 | |
| 87 | E | H | -2.4428 | |
| 88 | D | H | 0.0000 | |
| 89 | T | H | -0.8372 | |
| 90 | A | H | 0.0000 | |
| 91 | V | H | 0.1300 | |
| 92 | Y | H | 0.0000 | |
| 93 | Y | H | 0.0000 | |
| 94 | C | H | 0.0000 | |
| 95 | A | H | 0.0000 | |
| 96 | R | H | 0.0000 | |
| 97 | F | H | 0.4667 | |
| 98 | F | H | 0.0000 | |
| 99 | T | H | -1.2556 | |
| 100 | K | H | -2.5684 | |
| 101 | N | H | -2.4469 | |
| 102 | G | H | -1.8301 | |
| 103 | E | H | -1.6889 | |
| 104 | F | H | -0.8259 | |
| 105 | V | H | -0.2062 | |
| 106 | A | H | 0.1961 | |
| 107 | V | H | 0.0000 | |
| 108 | W | H | -0.5315 | |
| 109 | G | H | 0.0000 | |
| 110 | Q | H | -1.3653 | |
| 111 | G | H | -0.5776 | |
| 112 | T | H | -0.0159 | |
| 113 | L | H | 0.0936 | |
| 114 | V | H | 0.0000 | |
| 115 | T | H | 0.0000 | |
| 116 | V | H | 0.0000 | |
| 117 | S | H | -1.0931 | |
| 118 | S | H | -0.7053 | |
| 119 | A | H | -0.4677 | |
| 120 | S | H | -0.5909 | |
| 121 | T | H | -0.7637 | |
| 122 | K | H | -1.2614 | |
| 123 | G | H | -1.3453 | |
| 124 | P | H | 0.0000 | |
| 125 | S | H | -0.3941 | |
| 126 | V | H | 0.0000 | |
| 127 | F | H | 0.0000 | |
| 128 | P | H | -1.1291 | |
| 129 | L | H | 0.0000 | |
| 130 | A | H | -1.1172 | |
| 131 | P | H | 0.0000 | |
| 132 | S | H | -0.9877 | |
| 133 | S | H | -0.8349 | |
| 134 | K | H | -1.2723 | |
| 135 | S | H | 0.0000 | |
| 136 | T | H | -0.7546 | |
| 137 | S | H | -0.7559 | |
| 138 | G | H | -0.8122 | |
| 139 | G | H | -0.8808 | |
| 140 | T | H | -0.5963 | |
| 141 | A | H | 0.0000 | |
| 142 | A | H | 0.0000 | |
| 143 | L | H | 0.0000 | |
| 144 | G | H | 0.0000 | |
| 145 | C | H | 0.0000 | |
| 146 | L | H | 0.0000 | |
| 147 | V | H | 0.0000 | |
| 148 | K | H | 0.0000 | |
| 149 | D | H | -0.3218 | |
| 150 | Y | H | 0.0000 | |
| 151 | F | H | 0.0000 | |
| 152 | P | H | 0.0000 | |
| 153 | E | H | -0.5505 | |
| 154 | P | H | -0.6692 | |
| 155 | V | H | -0.6670 | |
| 156 | T | H | -0.5660 | |
| 157 | V | H | -0.3622 | |
| 158 | S | H | -0.3817 | |
| 159 | W | H | 0.0000 | |
| 160 | N | H | -0.7313 | |
| 161 | S | H | -0.6444 | |
| 162 | G | H | -0.4374 | |
| 163 | A | H | -0.1937 | |
| 164 | L | H | 0.0632 | |
| 165 | T | H | -0.1125 | |
| 166 | S | H | -0.1268 | |
| 167 | G | H | -0.1202 | |
| 168 | V | H | 0.2262 | |
| 169 | H | H | -0.3073 | |
| 170 | T | H | -0.1837 | |
| 171 | F | H | 0.0000 | |
| 172 | P | H | -0.2815 | |
| 173 | A | H | 0.2321 | |
| 174 | V | H | 0.4467 | |
| 175 | L | H | 0.9790 | |
| 176 | Q | H | 0.1548 | |
| 177 | S | H | -0.1298 | |
| 178 | S | H | -0.2159 | |
| 179 | G | H | 0.0432 | |
| 180 | L | H | 0.1181 | |
| 181 | Y | H | 0.4261 | |
| 182 | S | H | 0.0000 | |
| 183 | L | H | 0.0000 | |
| 184 | S | H | 0.0000 | |
| 185 | S | H | 0.0000 | |
| 186 | V | H | 0.0000 | |
| 187 | V | H | 0.0000 | |
| 188 | T | H | -0.0920 | |
| 189 | V | H | 0.0000 | |
| 190 | P | H | -0.5395 | |
| 191 | S | H | -0.5823 | |
| 192 | S | H | -0.5858 | |
| 193 | S | H | -0.5580 | |
| 194 | L | H | -0.7437 | |
| 195 | G | H | -0.9432 | |
| 196 | T | H | -0.6857 | |
| 197 | Q | H | -1.1063 | |
| 198 | T | H | -1.0701 | |
| 199 | Y | H | 0.0000 | |
| 200 | I | H | -1.2826 | |
| 201 | C | H | 0.0000 | |
| 202 | N | H | -1.4676 | |
| 203 | V | H | 0.0000 | |
| 204 | N | H | -1.8911 | |
| 205 | H | H | 0.0000 | |
| 206 | K | H | -2.7161 | |
| 207 | P | H | -1.5833 | |
| 208 | S | H | -1.8688 | |
| 209 | N | H | -2.5644 | |
| 210 | T | H | -2.0364 | |
| 211 | K | H | -2.6627 | |
| 212 | V | H | -1.5987 | |
| 213 | D | H | -2.5194 | |
| 214 | K | H | -2.1259 | |
| 215 | K | H | -2.5219 | |
| 216 | V | H | 0.0000 | |
| 217 | E | H | -2.7584 | |
| 218 | P | H | -1.7204 | |
| 219 | K | H | -2.1173 | |
| 220 | S | H | -1.5546 | |
| 221 | C | H | -1.2505 | |
| 222 | D | H | -2.6368 | |
| 223 | K | H | -2.7392 | |
| 224 | T | H | -1.8917 | |
| 225 | H | H | -1.9282 | |
| 226 | T | H | -0.8596 | |
| 1 | D | L | -2.2953 | |
| 2 | I | L | -1.7210 | |
| 3 | Q | L | -2.2583 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.2535 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6939 | |
| 8 | P | L | -0.5847 | |
| 9 | S | L | -0.9719 | |
| 10 | S | L | -1.0818 | |
| 11 | L | L | -0.8172 | |
| 12 | S | L | -1.1821 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.8412 | |
| 15 | V | L | -0.0083 | |
| 16 | G | L | -0.8018 | |
| 17 | D | L | -1.6941 | |
| 18 | R | L | -2.3421 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6196 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7374 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.1267 | |
| 25 | L | L | 0.0000 | |
| 26 | Q | L | -2.6598 | |
| 27 | K | L | -2.3051 | |
| 28 | L | L | -1.0575 | |
| 29 | T | L | -1.2462 | |
| 30 | G | L | -1.4303 | |
| 31 | N | L | -2.2510 | |
| 32 | D | L | -2.5263 | |
| 33 | G | L | -1.8003 | |
| 34 | S | L | -1.1477 | |
| 35 | I | L | 0.0000 | |
| 36 | M | L | -0.1922 | |
| 37 | W | L | 0.0000 | |
| 38 | Y | L | 0.0000 | |
| 39 | Q | L | 0.0000 | |
| 40 | Q | L | 0.0000 | |
| 41 | K | L | -1.9616 | |
| 42 | P | L | -1.5200 | |
| 43 | G | L | -1.6568 | |
| 44 | K | L | -2.6066 | |
| 45 | A | L | -1.7227 | |
| 46 | P | L | 0.0000 | |
| 47 | K | L | -1.5435 | |
| 48 | V | L | 0.0000 | |
| 49 | L | L | 0.0000 | |
| 50 | I | L | 0.0000 | |
| 51 | Y | L | -0.6348 | |
| 52 | G | L | -0.6998 | |
| 53 | P | L | -0.9348 | |
| 54 | T | L | -0.9067 | |
| 55 | G | L | -1.1978 | |
| 56 | K | L | -1.9306 | |
| 57 | K | L | -1.4827 | |
| 58 | P | L | 0.0000 | |
| 59 | S | L | -0.7024 | |
| 60 | G | L | -0.6239 | |
| 61 | V | L | -0.5540 | |
| 62 | P | L | -0.4411 | |
| 63 | S | L | -0.5417 | |
| 64 | R | L | -0.7444 | |
| 65 | F | L | 0.0000 | |
| 66 | S | L | -0.7079 | |
| 67 | G | L | -0.7274 | |
| 68 | S | L | -0.9696 | |
| 69 | G | L | -1.3927 | |
| 70 | S | L | -1.4439 | |
| 71 | G | L | -1.6450 | |
| 72 | T | L | -1.8894 | |
| 73 | D | L | -2.4751 | |
| 74 | Y | L | 0.0000 | |
| 75 | T | L | -0.7910 | |
| 76 | L | L | 0.0000 | |
| 77 | T | L | -0.5850 | |
| 78 | I | L | 0.0000 | |
| 79 | S | L | -1.2976 | |
| 80 | S | L | -1.1730 | |
| 81 | L | L | 0.0000 | |
| 82 | Q | L | -1.0338 | |
| 83 | P | L | -1.1319 | |
| 84 | E | L | -1.7314 | |
| 85 | D | L | 0.0000 | |
| 86 | F | L | -0.8232 | |
| 87 | A | L | 0.0000 | |
| 88 | T | L | 0.0000 | |
| 89 | Y | L | 0.0000 | |
| 90 | Y | L | 0.0000 | |
| 91 | C | L | 0.0000 | |
| 92 | Q | L | 0.0000 | |
| 93 | L | L | 0.0000 | |
| 94 | S | L | -1.2064 | |
| 95 | K | L | -2.2495 | |
| 96 | D | L | -1.2370 | |
| 97 | G | L | 0.0000 | |
| 98 | T | L | -0.9128 | |
| 99 | F | L | -0.3575 | |
| 100 | G | L | 0.0000 | |
| 101 | Q | L | -1.6490 | |
| 102 | G | L | 0.0000 | |
| 103 | T | L | 0.0000 | |
| 104 | K | L | -2.0560 | |
| 105 | V | L | 0.0000 | |
| 106 | E | L | -1.5257 | |
| 107 | I | L | 0.0000 | |
| 108 | K | L | -1.5978 | |
| 109 | R | L | -1.1066 | |
| 110 | T | L | -0.1907 | |
| 111 | V | L | 0.2167 | |
| 112 | A | L | -0.1173 | |
| 113 | A | L | -0.1412 | |
| 114 | P | L | 0.0000 | |
| 115 | S | L | -0.2499 | |
| 116 | V | L | 0.0000 | |
| 117 | F | L | 0.0000 | |
| 118 | I | L | 0.0000 | |
| 119 | F | L | 0.0000 | |
| 120 | P | L | -0.5808 | |
| 121 | P | L | 0.0000 | |
| 122 | S | L | -1.7363 | |
| 123 | D | L | -3.0140 | |
| 124 | E | L | -2.8637 | |
| 125 | Q | L | 0.0000 | |
| 126 | L | L | -2.2055 | |
| 127 | K | L | -2.7909 | |
| 128 | S | L | -1.7552 | |
| 129 | G | L | -1.2697 | |
| 130 | T | L | -0.8523 | |
| 131 | A | L | 0.0000 | |
| 132 | S | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | V | L | 0.0000 | |
| 135 | C | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | L | L | 0.0000 | |
| 138 | N | L | 0.0000 | |
| 139 | N | L | -0.9302 | |
| 140 | F | L | 0.0000 | |
| 141 | Y | L | 0.0000 | |
| 142 | P | L | -1.8686 | |
| 143 | R | L | -3.1496 | |
| 144 | E | L | -3.2905 | |
| 145 | A | L | -2.3727 | |
| 146 | K | L | -2.6061 | |
| 147 | V | L | -1.1307 | |
| 148 | Q | L | -0.6744 | |
| 149 | W | L | 0.0000 | |
| 150 | K | L | -0.4914 | |
| 151 | V | L | 0.0000 | |
| 152 | D | L | -1.5073 | |
| 153 | N | L | -1.1552 | |
| 154 | A | L | -0.1436 | |
| 155 | L | L | 0.7213 | |
| 156 | Q | L | -0.1855 | |
| 157 | S | L | -0.4117 | |
| 158 | G | L | -0.9089 | |
| 159 | N | L | -0.8239 | |
| 160 | S | L | -1.1328 | |
| 161 | Q | L | -1.4553 | |
| 162 | E | L | -1.6672 | |
| 163 | S | L | -0.8000 | |
| 164 | V | L | -0.7087 | |
| 165 | T | L | -1.2024 | |
| 166 | E | L | -2.3155 | |
| 167 | Q | L | 0.0000 | |
| 168 | D | L | -1.9246 | |
| 169 | S | L | -1.9725 | |
| 170 | K | L | -2.2247 | |
| 171 | D | L | -1.6682 | |
| 172 | S | L | -1.8239 | |
| 173 | T | L | 0.0000 | |
| 174 | Y | L | 0.0000 | |
| 175 | S | L | 0.0000 | |
| 176 | L | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | S | L | 0.0000 | |
| 179 | T | L | -0.6281 | |
| 180 | L | L | 0.0000 | |
| 181 | T | L | -0.4520 | |
| 182 | L | L | -0.6202 | |
| 183 | S | L | -1.1891 | |
| 184 | K | L | -1.9897 | |
| 185 | A | L | -1.8687 | |
| 186 | D | L | -2.4627 | |
| 187 | Y | L | 0.0000 | |
| 188 | E | L | -3.5644 | |
| 189 | K | L | -3.5755 | |
| 190 | H | L | -2.9231 | |
| 191 | K | L | -3.1501 | |
| 192 | V | L | -1.7245 | |
| 193 | Y | L | 0.0000 | |
| 194 | A | L | 0.0000 | |
| 195 | C | L | 0.0000 | |
| 196 | E | L | -0.7068 | |
| 197 | V | L | 0.0000 | |
| 198 | T | L | -1.2426 | |
| 199 | H | L | 0.0000 | |
| 200 | Q | L | -1.7857 | |
| 201 | G | L | -0.4554 | |
| 202 | L | L | -0.2661 | |
| 203 | S | L | -0.4720 | |
| 204 | S | L | -0.4256 | |
| 205 | P | L | -0.5437 | |
| 206 | V | L | 0.0558 | |
| 207 | T | L | -0.4077 | |
| 208 | K | L | -0.7845 | |
| 209 | S | L | -0.7385 | |
| 210 | F | L | 0.0000 | |
| 211 | N | L | -1.9865 | |
| 212 | R | L | -2.6214 | |
| 213 | G | L | -2.1606 | |
| 214 | E | L | -2.1622 | |
| 215 | C | L | -1.0594 |