Project name: 218

Status: done

Started: 2026-01-20 06:36:03
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGELTGGYMHWVRQAPGKGLEWVGLIIGDEVTIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARFFTKNGEFVAVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
L: DIQMTQSPSSLSASVGDRVTITCKLQKLTGNDGSIMWYQQKPGKAPKVLIYGPTGKKPSGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQLSKDGTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:21)
Show buried residues

Minimal score value
-3.5755
Maximal score value
1.0962
Average score
-0.8113
Total score value
-357.7693

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0219
2 V H -1.4246
3 Q H -1.1988
4 L H 0.0000
5 V H 1.0295
6 E H 0.0000
7 S H -0.1978
8 G H -0.7727
9 G H -0.4788
10 G H -0.2503
11 L H -0.0489
12 V H 0.0000
13 Q H -1.7496
14 P H -1.9893
15 G H -1.6285
16 G H -1.2867
17 S H -1.3398
18 L H -1.0214
19 R H -1.6812
20 L H 0.0000
21 S H -0.2547
22 C H 0.0000
23 A H -0.1005
24 A H 0.0000
25 S H -1.1601
26 G H -1.5472
27 E H -2.4992
28 L H 0.0000
29 T H -1.3583
30 G H -0.7496
31 G H 0.0000
32 Y H 0.8489
33 M H 0.0000
34 H H 0.4269
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7127
39 A H -1.1538
40 P H -0.9870
41 G H -1.4726
42 K H -2.3210
43 G H -1.5056
44 L H 0.0000
45 E H -0.7450
46 W H 0.0000
47 V H 0.0000
48 G H 0.0000
49 L H 0.8968
50 I H 0.0000
51 I H 0.2896
52 G H -1.3095
53 D H -2.7401
54 E H -2.2300
55 V H 0.0604
56 T H 0.4635
57 I H 1.0962
58 Y H -0.4059
59 D H -1.2295
60 P H -2.0138
61 K H -2.5573
62 F H 0.0000
63 Q H -2.5411
64 D H -2.9584
65 R H -2.1289
66 A H 0.0000
67 T H -0.7974
68 I H 0.0000
69 S H -0.9099
70 A H -1.8259
71 D H -2.4885
72 N H -3.0397
73 S H -2.1431
74 K H -2.7565
75 N H -2.3271
76 T H 0.0000
77 A H 0.0000
78 Y H -0.4238
79 L H 0.0000
80 Q H -0.9899
81 M H 0.0000
82 N H -1.7166
83 S H -1.6311
84 L H 0.0000
85 R H -2.9697
86 A H -2.0497
87 E H -2.4428
88 D H 0.0000
89 T H -0.8372
90 A H 0.0000
91 V H 0.1300
92 Y H 0.0000
93 Y H 0.0000
94 C H 0.0000
95 A H 0.0000
96 R H 0.0000
97 F H 0.4667
98 F H 0.0000
99 T H -1.2556
100 K H -2.5684
101 N H -2.4469
102 G H -1.8301
103 E H -1.6889
104 F H -0.8259
105 V H -0.2062
106 A H 0.1961
107 V H 0.0000
108 W H -0.5315
109 G H 0.0000
110 Q H -1.3653
111 G H -0.5776
112 T H -0.0159
113 L H 0.0936
114 V H 0.0000
115 T H 0.0000
116 V H 0.0000
117 S H -1.0931
118 S H -0.7053
119 A H -0.4677
120 S H -0.5909
121 T H -0.7637
122 K H -1.2614
123 G H -1.3453
124 P H 0.0000
125 S H -0.3941
126 V H 0.0000
127 F H 0.0000
128 P H -1.1291
129 L H 0.0000
130 A H -1.1172
131 P H 0.0000
132 S H -0.9877
133 S H -0.8349
134 K H -1.2723
135 S H 0.0000
136 T H -0.7546
137 S H -0.7559
138 G H -0.8122
139 G H -0.8808
140 T H -0.5963
141 A H 0.0000
142 A H 0.0000
143 L H 0.0000
144 G H 0.0000
145 C H 0.0000
146 L H 0.0000
147 V H 0.0000
148 K H 0.0000
149 D H -0.3218
150 Y H 0.0000
151 F H 0.0000
152 P H 0.0000
153 E H -0.5505
154 P H -0.6692
155 V H -0.6670
156 T H -0.5660
157 V H -0.3622
158 S H -0.3817
159 W H 0.0000
160 N H -0.7313
161 S H -0.6444
162 G H -0.4374
163 A H -0.1937
164 L H 0.0632
165 T H -0.1125
166 S H -0.1268
167 G H -0.1202
168 V H 0.2262
169 H H -0.3073
170 T H -0.1837
171 F H 0.0000
172 P H -0.2815
173 A H 0.2321
174 V H 0.4467
175 L H 0.9790
176 Q H 0.1548
177 S H -0.1298
178 S H -0.2159
179 G H 0.0432
180 L H 0.1181
181 Y H 0.4261
182 S H 0.0000
183 L H 0.0000
184 S H 0.0000
185 S H 0.0000
186 V H 0.0000
187 V H 0.0000
188 T H -0.0920
189 V H 0.0000
190 P H -0.5395
191 S H -0.5823
192 S H -0.5858
193 S H -0.5580
194 L H -0.7437
195 G H -0.9432
196 T H -0.6857
197 Q H -1.1063
198 T H -1.0701
199 Y H 0.0000
200 I H -1.2826
201 C H 0.0000
202 N H -1.4676
203 V H 0.0000
204 N H -1.8911
205 H H 0.0000
206 K H -2.7161
207 P H -1.5833
208 S H -1.8688
209 N H -2.5644
210 T H -2.0364
211 K H -2.6627
212 V H -1.5987
213 D H -2.5194
214 K H -2.1259
215 K H -2.5219
216 V H 0.0000
217 E H -2.7584
218 P H -1.7204
219 K H -2.1173
220 S H -1.5546
221 C H -1.2505
222 D H -2.6368
223 K H -2.7392
224 T H -1.8917
225 H H -1.9282
226 T H -0.8596
1 D L -2.2953
2 I L -1.7210
3 Q L -2.2583
4 M L 0.0000
5 T L -1.2535
6 Q L 0.0000
7 S L -0.6939
8 P L -0.5847
9 S L -0.9719
10 S L -1.0818
11 L L -0.8172
12 S L -1.1821
13 A L 0.0000
14 S L -0.8412
15 V L -0.0083
16 G L -0.8018
17 D L -1.6941
18 R L -2.3421
19 V L 0.0000
20 T L -0.6196
21 I L 0.0000
22 T L -0.7374
23 C L 0.0000
24 K L -2.1267
25 L L 0.0000
26 Q L -2.6598
27 K L -2.3051
28 L L -1.0575
29 T L -1.2462
30 G L -1.4303
31 N L -2.2510
32 D L -2.5263
33 G L -1.8003
34 S L -1.1477
35 I L 0.0000
36 M L -0.1922
37 W L 0.0000
38 Y L 0.0000
39 Q L 0.0000
40 Q L 0.0000
41 K L -1.9616
42 P L -1.5200
43 G L -1.6568
44 K L -2.6066
45 A L -1.7227
46 P L 0.0000
47 K L -1.5435
48 V L 0.0000
49 L L 0.0000
50 I L 0.0000
51 Y L -0.6348
52 G L -0.6998
53 P L -0.9348
54 T L -0.9067
55 G L -1.1978
56 K L -1.9306
57 K L -1.4827
58 P L 0.0000
59 S L -0.7024
60 G L -0.6239
61 V L -0.5540
62 P L -0.4411
63 S L -0.5417
64 R L -0.7444
65 F L 0.0000
66 S L -0.7079
67 G L -0.7274
68 S L -0.9696
69 G L -1.3927
70 S L -1.4439
71 G L -1.6450
72 T L -1.8894
73 D L -2.4751
74 Y L 0.0000
75 T L -0.7910
76 L L 0.0000
77 T L -0.5850
78 I L 0.0000
79 S L -1.2976
80 S L -1.1730
81 L L 0.0000
82 Q L -1.0338
83 P L -1.1319
84 E L -1.7314
85 D L 0.0000
86 F L -0.8232
87 A L 0.0000
88 T L 0.0000
89 Y L 0.0000
90 Y L 0.0000
91 C L 0.0000
92 Q L 0.0000
93 L L 0.0000
94 S L -1.2064
95 K L -2.2495
96 D L -1.2370
97 G L 0.0000
98 T L -0.9128
99 F L -0.3575
100 G L 0.0000
101 Q L -1.6490
102 G L 0.0000
103 T L 0.0000
104 K L -2.0560
105 V L 0.0000
106 E L -1.5257
107 I L 0.0000
108 K L -1.5978
109 R L -1.1066
110 T L -0.1907
111 V L 0.2167
112 A L -0.1173
113 A L -0.1412
114 P L 0.0000
115 S L -0.2499
116 V L 0.0000
117 F L 0.0000
118 I L 0.0000
119 F L 0.0000
120 P L -0.5808
121 P L 0.0000
122 S L -1.7363
123 D L -3.0140
124 E L -2.8637
125 Q L 0.0000
126 L L -2.2055
127 K L -2.7909
128 S L -1.7552
129 G L -1.2697
130 T L -0.8523
131 A L 0.0000
132 S L 0.0000
133 V L 0.0000
134 V L 0.0000
135 C L 0.0000
136 L L 0.0000
137 L L 0.0000
138 N L 0.0000
139 N L -0.9302
140 F L 0.0000
141 Y L 0.0000
142 P L -1.8686
143 R L -3.1496
144 E L -3.2905
145 A L -2.3727
146 K L -2.6061
147 V L -1.1307
148 Q L -0.6744
149 W L 0.0000
150 K L -0.4914
151 V L 0.0000
152 D L -1.5073
153 N L -1.1552
154 A L -0.1436
155 L L 0.7213
156 Q L -0.1855
157 S L -0.4117
158 G L -0.9089
159 N L -0.8239
160 S L -1.1328
161 Q L -1.4553
162 E L -1.6672
163 S L -0.8000
164 V L -0.7087
165 T L -1.2024
166 E L -2.3155
167 Q L 0.0000
168 D L -1.9246
169 S L -1.9725
170 K L -2.2247
171 D L -1.6682
172 S L -1.8239
173 T L 0.0000
174 Y L 0.0000
175 S L 0.0000
176 L L 0.0000
177 S L 0.0000
178 S L 0.0000
179 T L -0.6281
180 L L 0.0000
181 T L -0.4520
182 L L -0.6202
183 S L -1.1891
184 K L -1.9897
185 A L -1.8687
186 D L -2.4627
187 Y L 0.0000
188 E L -3.5644
189 K L -3.5755
190 H L -2.9231
191 K L -3.1501
192 V L -1.7245
193 Y L 0.0000
194 A L 0.0000
195 C L 0.0000
196 E L -0.7068
197 V L 0.0000
198 T L -1.2426
199 H L 0.0000
200 Q L -1.7857
201 G L -0.4554
202 L L -0.2661
203 S L -0.4720
204 S L -0.4256
205 P L -0.5437
206 V L 0.0558
207 T L -0.4077
208 K L -0.7845
209 S L -0.7385
210 F L 0.0000
211 N L -1.9865
212 R L -2.6214
213 G L -2.1606
214 E L -2.1622
215 C L -1.0594
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Laboratory of Theory of Biopolymers 2018