Project name: A?16-22_20

Status: done

Started: 2026-06-19 11:30:09
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Chain sequence(s) A: KLVFFAE
C: KLVFFAE
B: KLVFFAE
E: KLVFFAE
D: KLVFFAE
G: KLVFFAE
F: KLVFFAE
I: KLVFFAE
H: KLVFFAE
K: KLVFFAE
J: KLVFFAE
M: KLVFFAE
L: KLVFFAE
O: KLVFFAE
N: KLVFFAE
Q: KLVFFAE
P: KLVFFAE
S: KLVFFAE
R: KLVFFAE
T: KLVFFAE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:38)
Show buried residues

Minimal score value
-3.9218
Maximal score value
2.5473
Average score
-0.5406
Total score value
-75.6883

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.3031
2 L A -0.2028
3 V A 1.4271
4 F A 2.2471
5 F A 0.9509
6 A A 0.0000
7 E A -3.1205
1 K B -2.1239
2 L B -0.0645
3 V B 1.2139
4 F B 2.0092
5 F B 0.8775
6 A B 0.0000
7 E B -3.0680
1 K C -2.8405
2 L C -0.7572
3 V C 1.3047
4 F C 2.3939
5 F C 1.7422
6 A C 0.0000
7 E C -2.6622
1 K D -2.5072
2 L D 0.0505
3 V D 2.1063
4 F D 0.0000
5 F D 1.4505
6 A D 0.0000
7 E D -3.1211
1 K E -2.4539
2 L E -0.4485
3 V E 2.3390
4 F E 0.0000
5 F E 2.3606
6 A E 0.0000
7 E E -2.8715
1 K F -1.4445
2 L F 0.0000
3 V F 0.0000
4 F F 0.0000
5 F F 0.0000
6 A F 0.0000
7 E F -3.8458
1 K G -3.0792
2 L G -1.3268
3 V G 0.0000
4 F G 1.1394
5 F G 1.2150
6 A G 0.0000
7 E G -2.1327
1 K H -1.4828
2 L H -0.0945
3 V H 0.0000
4 F H 0.8485
5 F H 0.0000
6 A H 0.0000
7 E H -3.3390
1 K I -3.9218
2 L I -2.0765
3 V I -0.6523
4 F I 0.0000
5 F I 1.0969
6 A I 0.0000
7 E I -2.9667
1 K J -2.4859
2 L J 0.0000
3 V J 0.0000
4 F J 0.0000
5 F J -0.4475
6 A J 0.0000
7 E J -3.4422
1 K K -2.3083
2 L K 0.0000
3 V K 1.0839
4 F K 1.7133
5 F K -0.1236
6 A K -1.9265
7 E K -3.5182
1 K L -3.4286
2 L L -1.5553
3 V L 0.0000
4 F L 0.0000
5 F L 0.7930
6 A L 0.0000
7 E L -3.1198
1 K M -2.7409
2 L M 0.0000
3 V M 0.9777
4 F M 0.0000
5 F M -0.4295
6 A M 0.0000
7 E M -3.1956
1 K N -2.9046
2 L N -1.3034
3 V N 0.6622
4 F N 0.0000
5 F N 0.7508
6 A N 0.0000
7 E N -3.1614
1 K O -3.1280
2 L O 0.0000
3 V O 0.7226
4 F O 0.0000
5 F O 0.5946
6 A O 0.0000
7 E O -3.3688
1 K P -2.9423
2 L P 0.0000
3 V P 1.3562
4 F P 0.0000
5 F P 0.8666
6 A P 0.0000
7 E P -3.8341
1 K Q -3.2614
2 L Q 0.0000
3 V Q 1.3902
4 F Q 0.0000
5 F Q 2.0187
6 A Q 0.0000
7 E Q -3.2192
1 K R -2.3216
2 L R 0.0000
3 V R 1.7229
4 F R 0.0000
5 F R 1.5922
6 A R 0.0000
7 E R -3.0991
1 K S -2.4081
2 L S -0.4218
3 V S 1.4916
4 F S 0.0000
5 F S 1.6956
6 A S 0.0000
7 E S -3.0396
1 K T -2.5691
2 L T -0.5131
3 V T 1.7151
4 F T 2.5473
5 F T 1.7956
6 A T 0.0000
7 E T -2.8266
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Laboratory of Theory of Biopolymers 2018