| Chain sequence(s) |
A: KLVFFAE
C: KLVFFAE B: KLVFFAE E: KLVFFAE D: KLVFFAE G: KLVFFAE F: KLVFFAE I: KLVFFAE H: KLVFFAE K: KLVFFAE J: KLVFFAE M: KLVFFAE L: KLVFFAE O: KLVFFAE N: KLVFFAE Q: KLVFFAE P: KLVFFAE S: KLVFFAE R: KLVFFAE T: KLVFFAE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:34)
[INFO] Main: Simulation completed successfully. (00:07:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.3031 | |
| 2 | L | A | -0.2028 | |
| 3 | V | A | 1.4271 | |
| 4 | F | A | 2.2471 | |
| 5 | F | A | 0.9509 | |
| 6 | A | A | 0.0000 | |
| 7 | E | A | -3.1205 | |
| 1 | K | B | -2.1239 | |
| 2 | L | B | -0.0645 | |
| 3 | V | B | 1.2139 | |
| 4 | F | B | 2.0092 | |
| 5 | F | B | 0.8775 | |
| 6 | A | B | 0.0000 | |
| 7 | E | B | -3.0680 | |
| 1 | K | C | -2.8405 | |
| 2 | L | C | -0.7572 | |
| 3 | V | C | 1.3047 | |
| 4 | F | C | 2.3939 | |
| 5 | F | C | 1.7422 | |
| 6 | A | C | 0.0000 | |
| 7 | E | C | -2.6622 | |
| 1 | K | D | -2.5072 | |
| 2 | L | D | 0.0505 | |
| 3 | V | D | 2.1063 | |
| 4 | F | D | 0.0000 | |
| 5 | F | D | 1.4505 | |
| 6 | A | D | 0.0000 | |
| 7 | E | D | -3.1211 | |
| 1 | K | E | -2.4539 | |
| 2 | L | E | -0.4485 | |
| 3 | V | E | 2.3390 | |
| 4 | F | E | 0.0000 | |
| 5 | F | E | 2.3606 | |
| 6 | A | E | 0.0000 | |
| 7 | E | E | -2.8715 | |
| 1 | K | F | -1.4445 | |
| 2 | L | F | 0.0000 | |
| 3 | V | F | 0.0000 | |
| 4 | F | F | 0.0000 | |
| 5 | F | F | 0.0000 | |
| 6 | A | F | 0.0000 | |
| 7 | E | F | -3.8458 | |
| 1 | K | G | -3.0792 | |
| 2 | L | G | -1.3268 | |
| 3 | V | G | 0.0000 | |
| 4 | F | G | 1.1394 | |
| 5 | F | G | 1.2150 | |
| 6 | A | G | 0.0000 | |
| 7 | E | G | -2.1327 | |
| 1 | K | H | -1.4828 | |
| 2 | L | H | -0.0945 | |
| 3 | V | H | 0.0000 | |
| 4 | F | H | 0.8485 | |
| 5 | F | H | 0.0000 | |
| 6 | A | H | 0.0000 | |
| 7 | E | H | -3.3390 | |
| 1 | K | I | -3.9218 | |
| 2 | L | I | -2.0765 | |
| 3 | V | I | -0.6523 | |
| 4 | F | I | 0.0000 | |
| 5 | F | I | 1.0969 | |
| 6 | A | I | 0.0000 | |
| 7 | E | I | -2.9667 | |
| 1 | K | J | -2.4859 | |
| 2 | L | J | 0.0000 | |
| 3 | V | J | 0.0000 | |
| 4 | F | J | 0.0000 | |
| 5 | F | J | -0.4475 | |
| 6 | A | J | 0.0000 | |
| 7 | E | J | -3.4422 | |
| 1 | K | K | -2.3083 | |
| 2 | L | K | 0.0000 | |
| 3 | V | K | 1.0839 | |
| 4 | F | K | 1.7133 | |
| 5 | F | K | -0.1236 | |
| 6 | A | K | -1.9265 | |
| 7 | E | K | -3.5182 | |
| 1 | K | L | -3.4286 | |
| 2 | L | L | -1.5553 | |
| 3 | V | L | 0.0000 | |
| 4 | F | L | 0.0000 | |
| 5 | F | L | 0.7930 | |
| 6 | A | L | 0.0000 | |
| 7 | E | L | -3.1198 | |
| 1 | K | M | -2.7409 | |
| 2 | L | M | 0.0000 | |
| 3 | V | M | 0.9777 | |
| 4 | F | M | 0.0000 | |
| 5 | F | M | -0.4295 | |
| 6 | A | M | 0.0000 | |
| 7 | E | M | -3.1956 | |
| 1 | K | N | -2.9046 | |
| 2 | L | N | -1.3034 | |
| 3 | V | N | 0.6622 | |
| 4 | F | N | 0.0000 | |
| 5 | F | N | 0.7508 | |
| 6 | A | N | 0.0000 | |
| 7 | E | N | -3.1614 | |
| 1 | K | O | -3.1280 | |
| 2 | L | O | 0.0000 | |
| 3 | V | O | 0.7226 | |
| 4 | F | O | 0.0000 | |
| 5 | F | O | 0.5946 | |
| 6 | A | O | 0.0000 | |
| 7 | E | O | -3.3688 | |
| 1 | K | P | -2.9423 | |
| 2 | L | P | 0.0000 | |
| 3 | V | P | 1.3562 | |
| 4 | F | P | 0.0000 | |
| 5 | F | P | 0.8666 | |
| 6 | A | P | 0.0000 | |
| 7 | E | P | -3.8341 | |
| 1 | K | Q | -3.2614 | |
| 2 | L | Q | 0.0000 | |
| 3 | V | Q | 1.3902 | |
| 4 | F | Q | 0.0000 | |
| 5 | F | Q | 2.0187 | |
| 6 | A | Q | 0.0000 | |
| 7 | E | Q | -3.2192 | |
| 1 | K | R | -2.3216 | |
| 2 | L | R | 0.0000 | |
| 3 | V | R | 1.7229 | |
| 4 | F | R | 0.0000 | |
| 5 | F | R | 1.5922 | |
| 6 | A | R | 0.0000 | |
| 7 | E | R | -3.0991 | |
| 1 | K | S | -2.4081 | |
| 2 | L | S | -0.4218 | |
| 3 | V | S | 1.4916 | |
| 4 | F | S | 0.0000 | |
| 5 | F | S | 1.6956 | |
| 6 | A | S | 0.0000 | |
| 7 | E | S | -3.0396 | |
| 1 | K | T | -2.5691 | |
| 2 | L | T | -0.5131 | |
| 3 | V | T | 1.7151 | |
| 4 | F | T | 2.5473 | |
| 5 | F | T | 1.7956 | |
| 6 | A | T | 0.0000 | |
| 7 | E | T | -2.8266 |