| Chain sequence(s) |
A: QQKFQFQFEQQ
C: QQKFQFQFEQQ B: QQKFQFQFEQQ E: QQKFQFQFEQQ D: QQKFQFQFEQQ G: QQKFQFQFEQQ F: QQKFQFQFEQQ I: QQKFQFQFEQQ H: QQKFQFQFEQQ K: QQKFQFQFEQQ J: QQKFQFQFEQQ M: QQKFQFQFEQQ L: QQKFQFQFEQQ O: QQKFQFQFEQQ N: QQKFQFQFEQQ Q: QQKFQFQFEQQ P: QQKFQFQFEQQ S: QQKFQFQFEQQ R: QQKFQFQFEQQ T: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:34:16)
[INFO] Main: Simulation completed successfully. (00:34:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.8603 | |
| 2 | Q | A | -2.3503 | |
| 3 | K | A | -1.7139 | |
| 4 | F | A | -0.0779 | |
| 5 | Q | A | 0.0097 | |
| 6 | F | A | 0.7363 | |
| 7 | Q | A | 0.2913 | |
| 8 | F | A | 0.2295 | |
| 9 | E | A | -1.2796 | |
| 10 | Q | A | -2.1440 | |
| 11 | Q | A | -2.7004 | |
| 1 | Q | B | -2.7164 | |
| 2 | Q | B | -1.9955 | |
| 3 | K | B | -1.2104 | |
| 4 | F | B | 0.4143 | |
| 5 | Q | B | 0.2522 | |
| 6 | F | B | 0.7026 | |
| 7 | Q | B | -0.0135 | |
| 8 | F | B | -0.2213 | |
| 9 | E | B | -1.9916 | |
| 10 | Q | B | -2.6326 | |
| 11 | Q | B | -3.0437 | |
| 1 | Q | C | -3.3378 | |
| 2 | Q | C | -2.8004 | |
| 3 | K | C | -1.8440 | |
| 4 | F | C | 0.0496 | |
| 5 | Q | C | 0.0629 | |
| 6 | F | C | 0.7655 | |
| 7 | Q | C | 0.2593 | |
| 8 | F | C | 0.2207 | |
| 9 | E | C | -1.4214 | |
| 10 | Q | C | -2.1630 | |
| 11 | Q | C | -2.9090 | |
| 1 | Q | D | -2.9893 | |
| 2 | Q | D | -2.3004 | |
| 3 | K | D | -1.4412 | |
| 4 | F | D | 0.2477 | |
| 5 | Q | D | 0.0897 | |
| 6 | F | D | 0.6596 | |
| 7 | Q | D | 0.0073 | |
| 8 | F | D | -0.1337 | |
| 9 | E | D | -2.0689 | |
| 10 | Q | D | -2.9651 | |
| 11 | Q | D | -3.3058 | |
| 1 | Q | E | -3.3574 | |
| 2 | Q | E | -2.7246 | |
| 3 | K | E | -2.0536 | |
| 4 | F | E | -0.0616 | |
| 5 | Q | E | 0.1141 | |
| 6 | F | E | 0.7515 | |
| 7 | Q | E | 0.1844 | |
| 8 | F | E | 0.0576 | |
| 9 | E | E | -1.4347 | |
| 10 | Q | E | -2.1689 | |
| 11 | Q | E | -2.7517 | |
| 1 | Q | F | -2.4420 | |
| 2 | Q | F | -2.2005 | |
| 3 | K | F | -1.4557 | |
| 4 | F | F | 0.1114 | |
| 5 | Q | F | 0.1352 | |
| 6 | F | F | 0.6680 | |
| 7 | Q | F | -0.0508 | |
| 8 | F | F | -0.0759 | |
| 9 | E | F | -1.7846 | |
| 10 | Q | F | -2.6180 | |
| 11 | Q | F | -2.8139 | |
| 1 | Q | G | -2.6089 | |
| 2 | Q | G | -2.4594 | |
| 3 | K | G | -1.5576 | |
| 4 | F | G | 0.1178 | |
| 5 | Q | G | 0.2616 | |
| 6 | F | G | 0.8691 | |
| 7 | Q | G | 0.1740 | |
| 8 | F | G | -0.0947 | |
| 9 | E | G | -1.5562 | |
| 10 | Q | G | -2.1663 | |
| 11 | Q | G | -2.4586 | |
| 1 | Q | H | -3.4066 | |
| 2 | Q | H | -2.5437 | |
| 3 | K | H | -1.2878 | |
| 4 | F | H | 0.2272 | |
| 5 | Q | H | 0.5007 | |
| 6 | F | H | 1.1434 | |
| 7 | Q | H | 0.0000 | |
| 8 | F | H | 0.1716 | |
| 9 | E | H | 0.0000 | |
| 10 | Q | H | -2.7680 | |
| 11 | Q | H | -2.7904 | |
| 1 | Q | I | -3.2558 | |
| 2 | Q | I | -2.6689 | |
| 3 | K | I | -1.7759 | |
| 4 | F | I | 0.0000 | |
| 5 | Q | I | 0.5385 | |
| 6 | F | I | 1.2786 | |
| 7 | Q | I | 0.0000 | |
| 8 | F | I | 0.0000 | |
| 9 | E | I | 0.0000 | |
| 10 | Q | I | -2.6597 | |
| 11 | Q | I | -3.7820 | |
| 1 | Q | J | 0.0000 | |
| 2 | Q | J | -2.9614 | |
| 3 | K | J | -1.7571 | |
| 4 | F | J | 0.4625 | |
| 5 | Q | J | 0.3789 | |
| 6 | F | J | 1.4975 | |
| 7 | Q | J | 0.5565 | |
| 8 | F | J | 0.6362 | |
| 9 | E | J | -1.6199 | |
| 10 | Q | J | -2.6472 | |
| 11 | Q | J | -3.1252 | |
| 1 | Q | K | -3.0242 | |
| 2 | Q | K | -2.6747 | |
| 3 | K | K | -1.5182 | |
| 4 | F | K | 0.7436 | |
| 5 | Q | K | 0.4923 | |
| 6 | F | K | 1.4399 | |
| 7 | Q | K | 0.2486 | |
| 8 | F | K | 0.3118 | |
| 9 | E | K | -2.0129 | |
| 10 | Q | K | -3.0634 | |
| 11 | Q | K | -3.5700 | |
| 1 | Q | L | -3.2860 | |
| 2 | Q | L | -3.4213 | |
| 3 | K | L | -2.6793 | |
| 4 | F | L | -0.2550 | |
| 5 | Q | L | 0.2184 | |
| 6 | F | L | 1.2910 | |
| 7 | Q | L | 0.6843 | |
| 8 | F | L | 0.9083 | |
| 9 | E | L | 0.0000 | |
| 10 | Q | L | 0.0000 | |
| 11 | Q | L | 0.0000 | |
| 1 | Q | M | -3.1994 | |
| 2 | Q | M | 0.0000 | |
| 3 | K | M | -1.2948 | |
| 4 | F | M | 0.0000 | |
| 5 | Q | M | 0.5114 | |
| 6 | F | M | 0.0000 | |
| 7 | Q | M | -0.0641 | |
| 8 | F | M | 0.0000 | |
| 9 | E | M | -2.8154 | |
| 10 | Q | M | -3.6453 | |
| 11 | Q | M | -3.0173 | |
| 1 | Q | N | -2.7822 | |
| 2 | Q | N | -2.3238 | |
| 3 | K | N | -2.0290 | |
| 4 | F | N | 0.8577 | |
| 5 | Q | N | 0.1922 | |
| 6 | F | N | 1.6602 | |
| 7 | Q | N | -0.4193 | |
| 8 | F | N | -0.4979 | |
| 9 | E | N | -2.9689 | |
| 10 | Q | N | -2.8457 | |
| 11 | Q | N | -2.7128 | |
| 1 | Q | O | -3.1047 | |
| 2 | Q | O | -2.6463 | |
| 3 | K | O | -2.2244 | |
| 4 | F | O | -0.0438 | |
| 5 | Q | O | -0.0511 | |
| 6 | F | O | 1.2513 | |
| 7 | Q | O | 0.1676 | |
| 8 | F | O | 0.0013 | |
| 9 | E | O | -1.8881 | |
| 10 | Q | O | -2.5731 | |
| 11 | Q | O | -2.9321 | |
| 1 | Q | P | -2.6640 | |
| 2 | Q | P | -2.3280 | |
| 3 | K | P | -1.5637 | |
| 4 | F | P | 0.1424 | |
| 5 | Q | P | -0.0616 | |
| 6 | F | P | 0.8917 | |
| 7 | Q | P | -0.1593 | |
| 8 | F | P | -0.3521 | |
| 9 | E | P | -2.0575 | |
| 10 | Q | P | -2.5532 | |
| 11 | Q | P | -2.8181 | |
| 1 | Q | Q | -2.9640 | |
| 2 | Q | Q | -2.3227 | |
| 3 | K | Q | -1.7733 | |
| 4 | F | Q | 0.0460 | |
| 5 | Q | Q | -0.1222 | |
| 6 | F | Q | 0.7041 | |
| 7 | Q | Q | -0.0284 | |
| 8 | F | Q | 0.0816 | |
| 9 | E | Q | -1.5975 | |
| 10 | Q | Q | -2.2421 | |
| 11 | Q | Q | -2.7633 | |
| 1 | Q | R | -2.7273 | |
| 2 | Q | R | -2.0985 | |
| 3 | K | R | -1.2985 | |
| 4 | F | R | 0.4328 | |
| 5 | Q | R | 0.1812 | |
| 6 | F | R | 0.7316 | |
| 7 | Q | R | -0.1702 | |
| 8 | F | R | -0.1832 | |
| 9 | E | R | -1.9564 | |
| 10 | Q | R | -2.4913 | |
| 11 | Q | R | -2.9450 | |
| 1 | Q | S | -3.2571 | |
| 2 | Q | S | -2.5770 | |
| 3 | K | S | -1.7623 | |
| 4 | F | S | 0.0766 | |
| 5 | Q | S | 0.0714 | |
| 6 | F | S | 0.7863 | |
| 7 | Q | S | 0.3594 | |
| 8 | F | S | 0.4177 | |
| 9 | E | S | -1.2281 | |
| 10 | Q | S | -2.1078 | |
| 11 | Q | S | -2.7485 | |
| 1 | Q | T | -2.5053 | |
| 2 | Q | T | -1.9240 | |
| 3 | K | T | -1.1196 | |
| 4 | F | T | 0.4088 | |
| 5 | Q | T | 0.2175 | |
| 6 | F | T | 0.7179 | |
| 7 | Q | T | 0.0363 | |
| 8 | F | T | -0.0963 | |
| 9 | E | T | -1.8937 | |
| 10 | Q | T | -2.8038 | |
| 11 | Q | T | -3.0329 |