Project name: lanm_B4

Status: done

Started: 2026-07-27 01:22:32
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Chain sequence(s) A: ASGADALKALNKDNDDSLEIAEVIHAGATTFTAINPDGDTTLESGETKGRLTEKDWARANKDGDQTLEMNEWLKILKTRFKRADANKDGKLTAAELDSKAGQGVLVMIMK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-4.0391
Maximal score value
0.0234
Average score
-1.5013
Total score value
-165.1402

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.9596
2 S A -1.3477
3 G A 0.0000
4 A A -1.6881
5 D A -2.2428
6 A A 0.0000
7 L A -2.3564
8 K A -2.8260
9 A A -1.3091
10 L A -1.5433
11 N A 0.0000
12 K A -3.6482
13 D A -3.9700
14 N A -4.0391
15 D A -3.5815
16 D A -3.6116
17 S A 0.0000
18 L A 0.0000
19 E A -1.7702
20 I A -0.4450
21 A A -0.2979
22 E A -1.0199
23 V A 0.0000
24 I A -0.4208
25 H A -0.6578
26 A A 0.0000
27 G A 0.0000
28 A A -0.3071
29 T A -0.2290
30 T A 0.0000
31 F A 0.0000
32 T A -0.4354
33 A A -0.2055
34 I A -0.6027
35 N A 0.0000
36 P A -1.4409
37 D A -2.5092
38 G A -2.0406
39 D A -2.2322
40 T A -1.3750
41 T A -1.8319
42 L A 0.0000
43 E A -2.6637
44 S A -2.1990
45 G A -1.9870
46 E A -1.7110
47 T A 0.0000
48 K A -2.7429
49 G A -1.7765
50 R A -1.2730
51 L A 0.0000
52 T A -2.3597
53 E A -3.4693
54 K A -3.2851
55 D A -2.4684
56 W A 0.0000
57 A A -2.8072
58 R A -3.3129
59 A A -2.8834
60 N A 0.0000
61 K A -3.5693
62 D A -3.6620
63 G A -3.1709
64 D A -3.2098
65 Q A -3.0592
66 T A -2.5340
67 L A 0.0000
68 E A -2.0177
69 M A -1.1003
70 N A -1.8939
71 E A -2.0935
72 W A 0.0000
73 L A -1.4149
74 K A -2.2004
75 I A -1.3949
76 L A 0.0000
77 K A -2.1051
78 T A -1.9888
79 R A -2.0008
80 F A 0.0000
81 K A -3.6076
82 R A -3.4811
83 A A 0.0000
84 D A 0.0000
85 A A -2.2006
86 N A -2.9811
87 K A -3.6781
88 D A -3.0350
89 G A -2.3183
90 K A -2.3718
91 L A 0.0000
92 T A -1.2285
93 A A -1.2032
94 A A -0.6553
95 E A -1.5027
96 L A 0.0000
97 D A -2.2975
98 S A -1.9340
99 K A -2.5492
100 A A -2.1015
101 G A 0.0000
102 Q A -1.4582
103 G A -1.0189
104 V A 0.0000
105 L A 0.0000
106 V A 0.0234
107 M A 0.0000
108 I A 0.0000
109 M A -0.7023
110 K A -1.5396
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Laboratory of Theory of Biopolymers 2018