| Chain sequence(s) |
A: LMFHASDDDEILDYFDYLFDFWFKSSLNWDREKHHKFWFHVFFEDFFFAEHFDFSKFLVFFFWFFFDHVIWGPFWHLTFRGDRNYFARWPDLFKDFFDYYEQL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:03)
[INFO] Main: Simulation completed successfully. (00:02:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 2.2753 | |
| 2 | M | A | 2.1777 | |
| 3 | F | A | 2.4912 | |
| 4 | H | A | 0.1705 | |
| 5 | A | A | -0.3902 | |
| 6 | S | A | -1.8999 | |
| 7 | D | A | -3.6343 | |
| 8 | D | A | -3.8481 | |
| 9 | D | A | -3.8285 | |
| 10 | E | A | -3.8963 | |
| 11 | I | A | -1.9950 | |
| 12 | L | A | -1.2234 | |
| 13 | D | A | -2.3722 | |
| 14 | Y | A | 0.0000 | |
| 15 | F | A | -0.0330 | |
| 16 | D | A | -1.4221 | |
| 17 | Y | A | -0.2043 | |
| 18 | L | A | 0.0000 | |
| 19 | F | A | 0.0358 | |
| 20 | D | A | -0.8304 | |
| 21 | F | A | 0.0262 | |
| 22 | W | A | 0.4258 | |
| 23 | F | A | 0.7109 | |
| 24 | K | A | -0.4442 | |
| 25 | S | A | -0.5296 | |
| 26 | S | A | 0.3081 | |
| 27 | L | A | 0.9998 | |
| 28 | N | A | -0.5793 | |
| 29 | W | A | -0.6254 | |
| 30 | D | A | -2.2680 | |
| 31 | R | A | -3.5719 | |
| 32 | E | A | -3.9039 | |
| 33 | K | A | -3.4528 | |
| 34 | H | A | 0.0000 | |
| 35 | H | A | -2.2168 | |
| 36 | K | A | -2.2707 | |
| 37 | F | A | -1.1486 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | H | A | -0.7969 | |
| 41 | V | A | 0.0000 | |
| 42 | F | A | 0.4739 | |
| 43 | F | A | 0.0000 | |
| 44 | E | A | -1.1771 | |
| 45 | D | A | -0.8250 | |
| 46 | F | A | 0.0000 | |
| 47 | F | A | 1.6374 | |
| 48 | F | A | 1.5701 | |
| 49 | A | A | -0.1249 | |
| 50 | E | A | -0.8532 | |
| 51 | H | A | 0.3600 | |
| 52 | F | A | 1.6392 | |
| 53 | D | A | 0.0000 | |
| 54 | F | A | 2.2198 | |
| 55 | S | A | 0.8080 | |
| 56 | K | A | 0.9000 | |
| 57 | F | A | 2.1074 | |
| 58 | L | A | 2.5350 | |
| 59 | V | A | 0.0000 | |
| 60 | F | A | 0.0000 | |
| 61 | F | A | 3.2083 | |
| 62 | F | A | 2.7208 | |
| 63 | W | A | 0.0000 | |
| 64 | F | A | 2.2095 | |
| 65 | F | A | 2.4827 | |
| 66 | F | A | 2.1589 | |
| 67 | D | A | 0.0000 | |
| 68 | H | A | 0.0000 | |
| 69 | V | A | 2.0821 | |
| 70 | I | A | 2.4943 | |
| 71 | W | A | 1.9145 | |
| 72 | G | A | 0.0000 | |
| 73 | P | A | 0.0000 | |
| 74 | F | A | 2.2735 | |
| 75 | W | A | 1.6842 | |
| 76 | H | A | 0.0864 | |
| 77 | L | A | 0.1465 | |
| 78 | T | A | 0.8022 | |
| 79 | F | A | 1.3229 | |
| 80 | R | A | -1.1179 | |
| 81 | G | A | -1.1540 | |
| 82 | D | A | -1.4990 | |
| 83 | R | A | -2.3874 | |
| 84 | N | A | -1.9077 | |
| 85 | Y | A | -0.3078 | |
| 86 | F | A | 0.4000 | |
| 87 | A | A | -0.5368 | |
| 88 | R | A | -1.0105 | |
| 89 | W | A | -0.3474 | |
| 90 | P | A | -0.9763 | |
| 91 | D | A | -1.9167 | |
| 92 | L | A | 0.0000 | |
| 93 | F | A | 0.3995 | |
| 94 | K | A | -1.1089 | |
| 95 | D | A | -1.1295 | |
| 96 | F | A | 0.4702 | |
| 97 | F | A | 0.9613 | |
| 98 | D | A | -0.4662 | |
| 99 | Y | A | -0.1953 | |
| 100 | Y | A | 0.3357 | |
| 101 | E | A | -1.2271 | |
| 102 | Q | A | -0.9401 | |
| 103 | L | A | 0.5213 |