| Chain sequence(s) |
A: ACSKKWEYCIVPILGFVYCCPGLICGPFVCV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.5400 | |
| 2 | C | A | 0.9252 | |
| 3 | S | A | 0.0000 | |
| 4 | K | A | -0.8110 | |
| 5 | K | A | 0.2027 | |
| 6 | W | A | 0.9310 | |
| 7 | E | A | 0.0616 | |
| 8 | Y | A | 1.6743 | |
| 9 | C | A | 0.0000 | |
| 10 | I | A | 3.2068 | |
| 11 | V | A | 3.4716 | |
| 12 | P | A | 2.5769 | |
| 13 | I | A | 3.2759 | |
| 14 | L | A | 2.8893 | |
| 15 | G | A | 2.4610 | |
| 16 | F | A | 3.8431 | |
| 17 | V | A | 3.4860 | |
| 18 | Y | A | 2.9754 | |
| 19 | C | A | 1.5498 | |
| 20 | C | A | 0.4191 | |
| 21 | P | A | 0.1491 | |
| 22 | G | A | 0.2726 | |
| 23 | L | A | 1.5417 | |
| 24 | I | A | 2.8036 | |
| 25 | C | A | 0.0000 | |
| 26 | G | A | 1.8366 | |
| 27 | P | A | 1.3150 | |
| 28 | F | A | 2.6619 | |
| 29 | V | A | 2.1601 | |
| 30 | C | A | 0.0000 | |
| 31 | V | A | 1.8318 |