| Chain sequence(s) |
A: YITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTVYGV
D: SVSSVPTKLEVVAATPTSLLISWDAPAVTVDFYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAGYSDSWNWPYSPISINYRT input PDB |
| Selected Chain(s) | A,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 134 | Y | A | 2.0716 | |
| 135 | I | A | 2.4972 | |
| 136 | T | A | 1.1677 | |
| 137 | P | A | 1.1655 | |
| 138 | V | A | 1.4058 | |
| 139 | N | A | 0.0256 | |
| 140 | S | A | -0.4479 | |
| 141 | L | A | -0.5953 | |
| 142 | E | A | -1.1489 | |
| 143 | K | A | -1.9149 | |
| 144 | H | A | -1.2657 | |
| 145 | S | A | -1.0163 | |
| 146 | W | A | 0.0000 | |
| 147 | Y | A | 0.0000 | |
| 148 | H | A | -0.7709 | |
| 149 | G | A | 0.0000 | |
| 150 | P | A | -0.6414 | |
| 151 | V | A | 0.0000 | |
| 152 | S | A | -1.0715 | |
| 153 | R | A | -1.2756 | |
| 154 | N | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | A | A | 0.0000 | |
| 157 | E | A | -0.7374 | |
| 158 | Y | A | 0.0000 | |
| 159 | L | A | 0.0000 | |
| 160 | L | A | 0.0000 | |
| 161 | S | A | -0.3969 | |
| 162 | S | A | -0.1375 | |
| 163 | G | A | 0.2751 | |
| 164 | I | A | 0.7025 | |
| 165 | N | A | -0.6381 | |
| 166 | G | A | 0.0000 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | R | A | -1.0291 | |
| 172 | E | A | 0.0000 | |
| 173 | S | A | -1.4405 | |
| 174 | E | A | -1.6656 | |
| 175 | S | A | -1.1007 | |
| 176 | S | A | -1.0162 | |
| 177 | P | A | -1.2612 | |
| 178 | G | A | -1.2756 | |
| 179 | Q | A | -1.7885 | |
| 180 | R | A | -1.5072 | |
| 181 | S | A | -1.3609 | |
| 182 | I | A | 0.0000 | |
| 183 | S | A | 0.0000 | |
| 184 | L | A | 0.0000 | |
| 185 | R | A | -0.6644 | |
| 186 | Y | A | -0.9120 | |
| 187 | E | A | -2.5671 | |
| 188 | G | A | -2.2190 | |
| 189 | R | A | -2.2679 | |
| 190 | V | A | -0.9945 | |
| 191 | Y | A | -0.0468 | |
| 192 | H | A | -0.4894 | |
| 193 | Y | A | -0.7158 | |
| 194 | R | A | -2.0380 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.2554 | |
| 197 | T | A | -1.4199 | |
| 198 | A | A | -1.2832 | |
| 199 | S | A | -1.3661 | |
| 200 | D | A | -2.4022 | |
| 201 | G | A | -2.0122 | |
| 202 | K | A | -2.0266 | |
| 203 | L | A | -1.2634 | |
| 204 | Y | A | -1.2505 | |
| 205 | V | A | -0.8370 | |
| 206 | S | A | -1.3114 | |
| 207 | S | A | -1.4728 | |
| 208 | E | A | -2.3516 | |
| 209 | S | A | -1.6106 | |
| 210 | R | A | -2.2957 | |
| 211 | F | A | -1.4350 | |
| 212 | N | A | -2.0748 | |
| 213 | T | A | -1.2149 | |
| 214 | L | A | 0.0000 | |
| 215 | A | A | -0.9592 | |
| 216 | E | A | -1.9053 | |
| 217 | L | A | 0.0000 | |
| 218 | V | A | 0.0000 | |
| 219 | H | A | -1.5280 | |
| 220 | H | A | -1.0003 | |
| 221 | H | A | 0.0000 | |
| 222 | S | A | -0.5966 | |
| 223 | T | A | -0.1527 | |
| 224 | V | A | 0.4154 | |
| 225 | A | A | 0.1704 | |
| 226 | D | A | -0.7373 | |
| 227 | G | A | -0.5518 | |
| 228 | L | A | 0.0000 | |
| 229 | I | A | 0.9692 | |
| 230 | T | A | 0.2376 | |
| 231 | T | A | -0.1672 | |
| 232 | L | A | 0.0000 | |
| 233 | H | A | -0.7136 | |
| 234 | Y | A | 0.3717 | |
| 235 | P | A | -0.2643 | |
| 236 | A | A | 0.0000 | |
| 237 | P | A | -0.9527 | |
| 238 | K | A | -2.1245 | |
| 239 | R | A | -2.0662 | |
| 240 | N | A | -2.4798 | |
| 241 | K | A | -2.5445 | |
| 242 | P | A | 0.0000 | |
| 243 | T | A | 0.3121 | |
| 244 | V | A | 1.7804 | |
| 245 | Y | A | 2.1184 | |
| 246 | G | A | 0.0000 | |
| 247 | V | A | 0.8419 | |
| 3 | S | D | 0.6070 | |
| 4 | V | D | 1.5798 | |
| 5 | S | D | 0.7190 | |
| 6 | S | D | 0.2524 | |
| 7 | V | D | -0.1179 | |
| 8 | P | D | 0.0000 | |
| 9 | T | D | -1.6083 | |
| 10 | K | D | -2.7663 | |
| 11 | L | D | 0.0000 | |
| 12 | E | D | -1.8528 | |
| 13 | V | D | 0.3026 | |
| 14 | V | D | 1.5406 | |
| 15 | A | D | 0.9042 | |
| 16 | A | D | 0.3531 | |
| 17 | T | D | -0.1631 | |
| 18 | P | D | -0.7604 | |
| 19 | T | D | -0.5560 | |
| 20 | S | D | -0.2481 | |
| 21 | L | D | 0.0000 | |
| 22 | L | D | 0.8393 | |
| 23 | I | D | 0.0000 | |
| 24 | S | D | -0.8631 | |
| 25 | W | D | 0.0000 | |
| 26 | D | D | -2.7013 | |
| 27 | A | D | -1.1203 | |
| 28 | P | D | -0.2382 | |
| 29 | A | D | 0.4029 | |
| 30 | V | D | 1.0833 | |
| 31 | T | D | 0.3342 | |
| 32 | V | D | 0.0000 | |
| 33 | D | D | 0.0744 | |
| 34 | F | D | 0.0000 | |
| 35 | Y | D | 0.0000 | |
| 36 | V | D | 0.0000 | |
| 37 | I | D | 0.0000 | |
| 38 | T | D | 0.0000 | |
| 39 | Y | D | 0.0000 | |
| 40 | G | D | -1.9411 | |
| 41 | E | D | -3.1520 | |
| 42 | T | D | -2.3441 | |
| 43 | G | D | -2.3898 | |
| 44 | G | D | -2.1495 | |
| 45 | N | D | -2.1591 | |
| 46 | S | D | -1.4131 | |
| 47 | P | D | -0.9890 | |
| 48 | V | D | -1.1667 | |
| 49 | Q | D | -1.5538 | |
| 50 | E | D | -0.8949 | |
| 51 | F | D | 0.1165 | |
| 52 | T | D | 0.5314 | |
| 53 | V | D | 0.0474 | |
| 54 | P | D | -0.1889 | |
| 55 | G | D | -0.4375 | |
| 56 | S | D | -0.8853 | |
| 57 | K | D | -1.4203 | |
| 58 | S | D | -1.2806 | |
| 59 | T | D | -0.4780 | |
| 60 | A | D | 0.0000 | |
| 61 | T | D | 0.3016 | |
| 62 | I | D | 0.0000 | |
| 63 | S | D | -0.4450 | |
| 64 | G | D | -0.6760 | |
| 65 | L | D | 0.0000 | |
| 66 | S | D | -1.1150 | |
| 67 | P | D | -1.2054 | |
| 68 | G | D | -1.4155 | |
| 69 | V | D | -1.8984 | |
| 70 | D | D | -3.3508 | |
| 71 | Y | D | 0.0000 | |
| 72 | T | D | -1.4968 | |
| 73 | I | D | 0.0000 | |
| 74 | T | D | -0.1439 | |
| 75 | V | D | 0.0000 | |
| 76 | Y | D | 0.0000 | |
| 77 | A | D | 0.0000 | |
| 78 | G | D | 0.0000 | |
| 79 | Y | D | -0.1324 | |
| 80 | S | D | -0.2451 | |
| 81 | D | D | -1.4071 | |
| 82 | S | D | -1.1217 | |
| 83 | W | D | 0.0000 | |
| 84 | N | D | -1.2018 | |
| 85 | W | D | 0.0000 | |
| 86 | P | D | -0.3782 | |
| 87 | Y | D | 0.0548 | |
| 88 | S | D | 0.2075 | |
| 89 | P | D | 0.2755 | |
| 90 | I | D | 0.2225 | |
| 91 | S | D | -0.5692 | |
| 92 | I | D | -0.5623 | |
| 93 | N | D | -2.1501 | |
| 94 | Y | D | -1.9561 | |
| 95 | R | D | -3.0135 | |
| 96 | T | D | -1.4918 |