Project name: query_structure

Status: done

Started: 2026-03-16 23:39:02
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Chain sequence(s) A: YITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTVYGV
D: SVSSVPTKLEVVAATPTSLLISWDAPAVTVDFYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAGYSDSWNWPYSPISINYRT
input PDB
Selected Chain(s) A,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:29)
Show buried residues

Minimal score value
-3.3508
Maximal score value
2.4972
Average score
-0.5893
Total score value
-122.5835

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
134 Y A 2.0716
135 I A 2.4972
136 T A 1.1677
137 P A 1.1655
138 V A 1.4058
139 N A 0.0256
140 S A -0.4479
141 L A -0.5953
142 E A -1.1489
143 K A -1.9149
144 H A -1.2657
145 S A -1.0163
146 W A 0.0000
147 Y A 0.0000
148 H A -0.7709
149 G A 0.0000
150 P A -0.6414
151 V A 0.0000
152 S A -1.0715
153 R A -1.2756
154 N A 0.0000
155 A A 0.0000
156 A A 0.0000
157 E A -0.7374
158 Y A 0.0000
159 L A 0.0000
160 L A 0.0000
161 S A -0.3969
162 S A -0.1375
163 G A 0.2751
164 I A 0.7025
165 N A -0.6381
166 G A 0.0000
167 S A 0.0000
168 F A 0.0000
169 L A 0.0000
170 V A 0.0000
171 R A -1.0291
172 E A 0.0000
173 S A -1.4405
174 E A -1.6656
175 S A -1.1007
176 S A -1.0162
177 P A -1.2612
178 G A -1.2756
179 Q A -1.7885
180 R A -1.5072
181 S A -1.3609
182 I A 0.0000
183 S A 0.0000
184 L A 0.0000
185 R A -0.6644
186 Y A -0.9120
187 E A -2.5671
188 G A -2.2190
189 R A -2.2679
190 V A -0.9945
191 Y A -0.0468
192 H A -0.4894
193 Y A -0.7158
194 R A -2.0380
195 I A 0.0000
196 N A -1.2554
197 T A -1.4199
198 A A -1.2832
199 S A -1.3661
200 D A -2.4022
201 G A -2.0122
202 K A -2.0266
203 L A -1.2634
204 Y A -1.2505
205 V A -0.8370
206 S A -1.3114
207 S A -1.4728
208 E A -2.3516
209 S A -1.6106
210 R A -2.2957
211 F A -1.4350
212 N A -2.0748
213 T A -1.2149
214 L A 0.0000
215 A A -0.9592
216 E A -1.9053
217 L A 0.0000
218 V A 0.0000
219 H A -1.5280
220 H A -1.0003
221 H A 0.0000
222 S A -0.5966
223 T A -0.1527
224 V A 0.4154
225 A A 0.1704
226 D A -0.7373
227 G A -0.5518
228 L A 0.0000
229 I A 0.9692
230 T A 0.2376
231 T A -0.1672
232 L A 0.0000
233 H A -0.7136
234 Y A 0.3717
235 P A -0.2643
236 A A 0.0000
237 P A -0.9527
238 K A -2.1245
239 R A -2.0662
240 N A -2.4798
241 K A -2.5445
242 P A 0.0000
243 T A 0.3121
244 V A 1.7804
245 Y A 2.1184
246 G A 0.0000
247 V A 0.8419
3 S D 0.6070
4 V D 1.5798
5 S D 0.7190
6 S D 0.2524
7 V D -0.1179
8 P D 0.0000
9 T D -1.6083
10 K D -2.7663
11 L D 0.0000
12 E D -1.8528
13 V D 0.3026
14 V D 1.5406
15 A D 0.9042
16 A D 0.3531
17 T D -0.1631
18 P D -0.7604
19 T D -0.5560
20 S D -0.2481
21 L D 0.0000
22 L D 0.8393
23 I D 0.0000
24 S D -0.8631
25 W D 0.0000
26 D D -2.7013
27 A D -1.1203
28 P D -0.2382
29 A D 0.4029
30 V D 1.0833
31 T D 0.3342
32 V D 0.0000
33 D D 0.0744
34 F D 0.0000
35 Y D 0.0000
36 V D 0.0000
37 I D 0.0000
38 T D 0.0000
39 Y D 0.0000
40 G D -1.9411
41 E D -3.1520
42 T D -2.3441
43 G D -2.3898
44 G D -2.1495
45 N D -2.1591
46 S D -1.4131
47 P D -0.9890
48 V D -1.1667
49 Q D -1.5538
50 E D -0.8949
51 F D 0.1165
52 T D 0.5314
53 V D 0.0474
54 P D -0.1889
55 G D -0.4375
56 S D -0.8853
57 K D -1.4203
58 S D -1.2806
59 T D -0.4780
60 A D 0.0000
61 T D 0.3016
62 I D 0.0000
63 S D -0.4450
64 G D -0.6760
65 L D 0.0000
66 S D -1.1150
67 P D -1.2054
68 G D -1.4155
69 V D -1.8984
70 D D -3.3508
71 Y D 0.0000
72 T D -1.4968
73 I D 0.0000
74 T D -0.1439
75 V D 0.0000
76 Y D 0.0000
77 A D 0.0000
78 G D 0.0000
79 Y D -0.1324
80 S D -0.2451
81 D D -1.4071
82 S D -1.1217
83 W D 0.0000
84 N D -1.2018
85 W D 0.0000
86 P D -0.3782
87 Y D 0.0548
88 S D 0.2075
89 P D 0.2755
90 I D 0.2225
91 S D -0.5692
92 I D -0.5623
93 N D -2.1501
94 Y D -1.9561
95 R D -3.0135
96 T D -1.4918
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Laboratory of Theory of Biopolymers 2018