| Chain sequence(s) |
A: LKHSISDYTEAEFLQLVTTIICNADTSSEEELVKLVTHFEEMTEHPSGSALIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:51)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | L | A | 0.2874 | |
| 4 | K | A | -1.6991 | |
| 5 | H | A | -1.7826 | |
| 6 | S | A | -1.5796 | |
| 7 | I | A | 0.0000 | |
| 8 | S | A | -1.3676 | |
| 9 | D | A | -1.4299 | |
| 10 | Y | A | -1.4810 | |
| 11 | T | A | -1.9918 | |
| 12 | E | A | -2.6334 | |
| 13 | A | A | -1.6070 | |
| 14 | E | A | -2.1424 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -1.1307 | |
| 17 | Q | A | -1.6109 | |
| 18 | L | A | -0.6467 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.9910 | |
| 21 | T | A | -1.1080 | |
| 22 | I | A | 0.0000 | |
| 23 | C | A | -0.7026 | |
| 24 | N | A | -1.7227 | |
| 25 | A | A | -1.5024 | |
| 26 | D | A | -2.4956 | |
| 27 | T | A | -1.7849 | |
| 28 | S | A | -1.4540 | |
| 29 | S | A | -1.9474 | |
| 30 | E | A | -2.9358 | |
| 31 | E | A | -2.9496 | |
| 32 | E | A | -2.6051 | |
| 33 | L | A | -1.4660 | |
| 34 | V | A | -0.2108 | |
| 35 | K | A | -1.6899 | |
| 36 | L | A | -0.7613 | |
| 37 | V | A | -0.3056 | |
| 38 | T | A | -0.7577 | |
| 39 | H | A | -1.4133 | |
| 40 | F | A | 0.0000 | |
| 41 | E | A | -2.2733 | |
| 42 | E | A | -2.9505 | |
| 43 | M | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | E | A | -2.8484 | |
| 46 | H | A | -1.6472 | |
| 47 | P | A | -0.9035 | |
| 48 | S | A | -0.6480 | |
| 49 | G | A | -0.8922 | |
| 50 | S | A | 0.2935 | |
| 51 | A | A | 0.3472 | |
| 52 | L | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | 0.9346 | |
| 55 | Y | A | 0.6705 | |
| 56 | P | A | -1.5928 | |
| 57 | K | A | -3.0546 | |
| 58 | E | A | -3.1993 | |
| 59 | G | A | -2.8210 | |
| 60 | D | A | -3.3766 | |
| 61 | D | A | -3.7680 | |
| 62 | D | A | -2.8503 | |
| 63 | S | A | -1.6766 | |
| 64 | P | A | -1.1900 | |
| 65 | S | A | -1.1662 | |
| 66 | G | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | N | A | -2.5219 | |
| 70 | T | A | -1.9002 | |
| 71 | V | A | 0.0000 | |
| 72 | K | A | -2.4801 | |
| 73 | Q | A | -2.1139 | |
| 74 | W | A | -1.5096 | |
| 75 | R | A | 0.0000 | |
| 76 | A | A | -1.3257 | |
| 77 | A | A | -0.9877 | |
| 78 | N | A | -1.3718 | |
| 79 | G | A | -1.3256 | |
| 80 | K | A | -1.9001 | |
| 81 | S | A | -1.2801 | |
| 82 | G | A | -1.6746 | |
| 83 | F | A | -1.5490 | |
| 84 | K | A | -2.1659 | |
| 85 | Q | A | -1.9832 |