| Chain sequence(s) |
A: HNTTVFQGVAGQSLQVSCPYDSMKHWGRRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQCQSLHGSEADTLRKVLVEVLAD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | H | A | -1.8244 | |
| 20 | N | A | -1.7976 | |
| 21 | T | A | -0.6296 | |
| 22 | T | A | 0.2203 | |
| 23 | V | A | 1.0852 | |
| 24 | F | A | 0.1417 | |
| 25 | Q | A | -0.6623 | |
| 26 | G | A | 0.0000 | |
| 27 | V | A | -0.6718 | |
| 28 | A | A | -1.5036 | |
| 29 | G | A | -1.8447 | |
| 30 | Q | A | -2.2481 | |
| 31 | S | A | -2.2146 | |
| 32 | L | A | 0.0000 | |
| 33 | Q | A | -1.6308 | |
| 34 | V | A | 0.0000 | |
| 35 | S | A | -0.4784 | |
| 36 | C | A | 0.0000 | |
| 37 | P | A | -0.8928 | |
| 38 | Y | A | -1.1153 | |
| 39 | D | A | -1.8004 | |
| 40 | S | A | -0.7389 | |
| 41 | M | A | 0.0114 | |
| 42 | K | A | -1.6639 | |
| 43 | H | A | 0.0000 | |
| 44 | W | A | 0.0838 | |
| 45 | G | A | -0.1913 | |
| 46 | R | A | -0.9518 | |
| 47 | R | A | -0.7917 | |
| 48 | K | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | W | A | 0.0000 | |
| 51 | C | A | 0.0000 | |
| 52 | R | A | -0.8546 | |
| 53 | Q | A | 0.0000 | |
| 54 | L | A | -0.1267 | |
| 55 | G | A | -1.3508 | |
| 56 | E | A | -2.5855 | |
| 57 | K | A | -2.6065 | |
| 58 | G | A | -1.5330 | |
| 59 | P | A | -1.0969 | |
| 60 | C | A | -1.0314 | |
| 61 | Q | A | -1.4739 | |
| 62 | R | A | -1.3416 | |
| 63 | V | A | -0.7201 | |
| 64 | V | A | 0.0000 | |
| 65 | S | A | -0.8234 | |
| 66 | T | A | 0.0000 | |
| 67 | H | A | -0.2149 | |
| 68 | N | A | -0.8242 | |
| 69 | L | A | 0.5788 | |
| 70 | W | A | 1.0937 | |
| 71 | L | A | 2.1459 | |
| 72 | L | A | 1.6491 | |
| 73 | S | A | 0.0000 | |
| 74 | F | A | 1.8928 | |
| 75 | L | A | 0.9225 | |
| 76 | R | A | -0.9410 | |
| 77 | R | A | -1.1375 | |
| 78 | W | A | -0.7019 | |
| 79 | N | A | -1.2836 | |
| 80 | G | A | -1.2598 | |
| 81 | S | A | -1.5245 | |
| 82 | T | A | -1.2658 | |
| 83 | A | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | T | A | -0.2605 | |
| 86 | D | A | 0.0000 | |
| 87 | D | A | -0.7139 | |
| 88 | T | A | 0.3387 | |
| 89 | L | A | 1.0207 | |
| 90 | G | A | -0.4261 | |
| 91 | G | A | 0.0000 | |
| 92 | T | A | -0.8378 | |
| 93 | L | A | 0.0000 | |
| 94 | T | A | -0.6442 | |
| 95 | I | A | 0.0000 | |
| 96 | T | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | R | A | -3.1800 | |
| 99 | N | A | -2.9067 | |
| 100 | L | A | 0.0000 | |
| 101 | Q | A | -2.0718 | |
| 102 | P | A | -1.1259 | |
| 103 | H | A | -1.6414 | |
| 104 | D | A | -1.4973 | |
| 105 | A | A | -0.8297 | |
| 106 | G | A | 0.0084 | |
| 107 | L | A | 0.2486 | |
| 108 | Y | A | 0.0000 | |
| 109 | Q | A | -0.7648 | |
| 110 | C | A | 0.0000 | |
| 111 | Q | A | 0.0000 | |
| 112 | S | A | 0.0000 | |
| 113 | L | A | -1.7036 | |
| 114 | H | A | -2.3203 | |
| 115 | G | A | -1.6847 | |
| 116 | S | A | -1.5462 | |
| 117 | E | A | -2.7051 | |
| 118 | A | A | -2.1024 | |
| 119 | D | A | -2.2877 | |
| 120 | T | A | -1.2286 | |
| 121 | L | A | 0.0000 | |
| 122 | R | A | -1.3872 | |
| 123 | K | A | -0.8589 | |
| 124 | V | A | 0.0000 | |
| 125 | L | A | 0.6361 | |
| 126 | V | A | 0.0000 | |
| 127 | E | A | -0.4198 | |
| 128 | V | A | -0.5137 | |
| 129 | L | A | 0.1713 | |
| 130 | A | A | -0.3634 | |
| 131 | D | A | -1.5348 |