| Chain sequence(s) |
A: FEFEFKFK
C: FEFEFKFK B: FEFEFKFK E: FEFEFKFK D: FEFEFKFK G: FEFEFKFK F: FEFEFKFK I: FEFEFKFK H: FEFEFKFK K: FEFEFKFK J: FEFEFKFK M: FEFEFKFK L: FEFEFKFK O: FEFEFKFK N: FEFEFKFK Q: FEFEFKFK P: FEFEFKFK S: FEFEFKFK R: FEFEFKFK U: FEFEFKFK T: FEFEFKFK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,U,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:19:30)
[INFO] Main: Simulation completed successfully. (00:19:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.5976 | |
| 2 | E | A | -1.9347 | |
| 3 | F | A | -1.5379 | |
| 4 | E | A | -2.8661 | |
| 5 | F | A | -1.3750 | |
| 6 | K | A | -2.3917 | |
| 7 | F | A | -1.0533 | |
| 8 | K | A | -1.9583 | |
| 1 | F | B | 0.9201 | |
| 2 | E | B | -1.4682 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -2.4286 | |
| 5 | F | B | 0.0000 | |
| 6 | K | B | -2.5548 | |
| 7 | F | B | -1.3553 | |
| 8 | K | B | -1.5795 | |
| 1 | F | C | 1.1669 | |
| 2 | E | C | -0.7631 | |
| 3 | F | C | 0.0000 | |
| 4 | E | C | -1.7876 | |
| 5 | F | C | 0.0000 | |
| 6 | K | C | -1.8572 | |
| 7 | F | C | 0.0000 | |
| 8 | K | C | -1.6890 | |
| 1 | F | D | 0.4572 | |
| 2 | E | D | -1.1501 | |
| 3 | F | D | 0.0000 | |
| 4 | E | D | -1.4549 | |
| 5 | F | D | -0.5592 | |
| 6 | K | D | -1.2521 | |
| 7 | F | D | -0.2153 | |
| 8 | K | D | -0.4628 | |
| 1 | F | E | 1.7191 | |
| 2 | E | E | -0.0867 | |
| 3 | F | E | -0.2399 | |
| 4 | E | E | -0.8376 | |
| 5 | F | E | -0.2656 | |
| 6 | K | E | -1.0717 | |
| 7 | F | E | -0.2712 | |
| 8 | K | E | -1.2398 | |
| 1 | F | F | 1.0032 | |
| 2 | E | F | -1.1295 | |
| 3 | F | F | -0.7987 | |
| 4 | E | F | -1.4092 | |
| 5 | F | F | -0.5587 | |
| 6 | K | F | -1.0531 | |
| 7 | F | F | -0.0148 | |
| 8 | K | F | -0.1893 | |
| 1 | F | G | 1.3036 | |
| 2 | E | G | -0.9508 | |
| 3 | F | G | -0.5698 | |
| 4 | E | G | -1.8198 | |
| 5 | F | G | -1.0507 | |
| 6 | K | G | -2.4137 | |
| 7 | F | G | -1.2341 | |
| 8 | K | G | -1.9706 | |
| 1 | F | H | 0.8614 | |
| 2 | E | H | -2.0045 | |
| 3 | F | H | 0.0000 | |
| 4 | E | H | -3.0070 | |
| 5 | F | H | 0.0000 | |
| 6 | K | H | -2.5342 | |
| 7 | F | H | -1.1641 | |
| 8 | K | H | -1.6868 | |
| 1 | F | I | 0.8910 | |
| 2 | E | I | -1.8507 | |
| 3 | F | I | -0.9679 | |
| 4 | E | I | -2.7651 | |
| 5 | F | I | -1.1472 | |
| 6 | K | I | -2.5968 | |
| 7 | F | I | -0.9571 | |
| 8 | K | I | -1.9013 | |
| 1 | F | J | 0.9477 | |
| 2 | E | J | -1.7123 | |
| 3 | F | J | 0.0000 | |
| 4 | E | J | -2.7055 | |
| 5 | F | J | 0.0000 | |
| 6 | K | J | -2.5362 | |
| 7 | F | J | -1.6546 | |
| 8 | K | J | -2.4305 | |
| 1 | F | K | -0.4770 | |
| 2 | E | K | -2.1565 | |
| 3 | F | K | 0.0000 | |
| 4 | E | K | -2.3808 | |
| 5 | F | K | 0.0000 | |
| 6 | K | K | -2.3905 | |
| 7 | F | K | 0.0000 | |
| 8 | K | K | -1.8323 | |
| 1 | F | L | 0.4449 | |
| 2 | E | L | -1.4579 | |
| 3 | F | L | 0.0000 | |
| 4 | E | L | -2.6000 | |
| 5 | F | L | 0.0000 | |
| 6 | K | L | -1.8478 | |
| 7 | F | L | 0.0000 | |
| 8 | K | L | -1.6339 | |
| 1 | F | M | 0.8658 | |
| 2 | E | M | -0.9447 | |
| 3 | F | M | -0.9554 | |
| 4 | E | M | -2.0829 | |
| 5 | F | M | 0.0000 | |
| 6 | K | M | -2.4798 | |
| 7 | F | M | -2.0015 | |
| 8 | K | M | -2.6614 | |
| 1 | F | N | -0.5831 | |
| 2 | E | N | -2.4865 | |
| 3 | F | N | -2.1240 | |
| 4 | E | N | -2.8989 | |
| 5 | F | N | 0.0000 | |
| 6 | K | N | -1.6363 | |
| 7 | F | N | -0.8594 | |
| 8 | K | N | -1.3210 | |
| 1 | F | O | 0.5295 | |
| 2 | E | O | -1.4133 | |
| 3 | F | O | -1.4530 | |
| 4 | E | O | -2.3796 | |
| 5 | F | O | -2.1949 | |
| 6 | K | O | -2.9061 | |
| 7 | F | O | -1.8876 | |
| 8 | K | O | -1.9671 | |
| 1 | F | P | 0.2731 | |
| 2 | E | P | -2.0873 | |
| 3 | F | P | -1.8425 | |
| 4 | E | P | -2.8172 | |
| 5 | F | P | -1.7559 | |
| 6 | K | P | -2.0595 | |
| 7 | F | P | -1.0289 | |
| 8 | K | P | -1.2466 | |
| 1 | F | Q | 0.3549 | |
| 2 | E | Q | -2.2740 | |
| 3 | F | Q | 0.0000 | |
| 4 | E | Q | -2.7938 | |
| 5 | F | Q | -1.9505 | |
| 6 | K | Q | -2.4126 | |
| 7 | F | Q | 0.0000 | |
| 8 | K | Q | -1.6246 | |
| 1 | F | R | 0.5192 | |
| 2 | E | R | -1.7307 | |
| 3 | F | R | -1.9398 | |
| 4 | E | R | -2.8550 | |
| 5 | F | R | -2.0284 | |
| 6 | K | R | -2.6869 | |
| 7 | F | R | 0.0000 | |
| 8 | K | R | -1.8235 | |
| 1 | F | S | 1.0520 | |
| 2 | E | S | -1.4293 | |
| 3 | F | S | 0.0000 | |
| 4 | E | S | -3.0995 | |
| 5 | F | S | 0.0000 | |
| 6 | K | S | -3.2456 | |
| 7 | F | S | -2.0210 | |
| 8 | K | S | -2.3916 | |
| 1 | F | T | 0.7572 | |
| 2 | E | T | -1.9164 | |
| 3 | F | T | 0.0000 | |
| 4 | E | T | -2.9253 | |
| 5 | F | T | 0.0000 | |
| 6 | K | T | -2.6376 | |
| 7 | F | T | -0.9948 | |
| 8 | K | T | -1.6334 | |
| 1 | F | U | 1.1804 | |
| 2 | E | U | -0.4190 | |
| 3 | F | U | 0.4913 | |
| 4 | E | U | -0.9144 | |
| 5 | F | U | -0.1728 | |
| 6 | K | U | -1.0488 | |
| 7 | F | U | 0.2889 | |
| 8 | K | U | -1.0063 |