Project name: Defensin

Status: done

Started: 2026-04-21 06:15:42
Settings
Chain sequence(s) A: QPVSDVDPIPEDHVLVHEDAHQEVLQHSRQKRATCDLLSKWNWNHTACAGHCIAKGFKGGYCNDKAVCVCRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.7259
Maximal score value
2.2701
Average score
-0.8319
Total score value
-59.894

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
21 Q A -0.9136
22 P A -0.2130
23 V A 1.0562
24 S A -0.1308
25 D A -1.0858
26 V A 0.1751
27 D A -1.0088
28 P A -0.1198
29 I A 0.8501
30 P A -1.1293
31 E A -2.3835
32 D A -2.2940
33 H A -0.8337
34 V A 1.6510
35 L A 2.2701
36 V A 1.7394
37 H A -0.9114
38 E A -2.5481
39 D A -3.0997
40 A A -2.0557
41 H A -2.2543
42 Q A -2.1408
43 E A -1.5202
44 V A 0.5829
45 L A 0.8231
46 Q A -0.8787
47 H A -1.7318
48 S A -2.1408
49 R A -3.6991
50 Q A -3.6634
51 K A -3.7259
52 R A -3.1110
53 A A -1.3469
54 T A -0.9682
55 C A 0.0000
56 D A -1.3712
57 L A 0.5423
58 L A -0.0000
59 S A -0.9116
60 K A -1.2763
61 W A 0.1920
62 N A -0.8602
63 W A 0.2234
64 N A -0.4630
65 H A -0.5002
66 T A -0.1302
67 A A 0.4538
68 C A 0.0000
69 A A -0.0478
70 G A -0.0554
71 H A -0.0629
72 C A 0.0000
73 I A 0.6554
74 A A -0.1235
75 K A -1.2556
76 G A -0.8920
77 F A -0.7469
78 K A -1.8311
79 G A 0.0000
80 G A -0.1827
81 Y A 0.1968
82 C A -0.6060
83 N A -1.4266
84 D A -2.6187
85 K A -2.7657
86 A A -1.4493
87 V A -1.0222
88 C A 0.0000
89 V A -0.1032
90 C A -0.8356
91 R A -1.9964
92 N A -1.8630
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Laboratory of Theory of Biopolymers 2018