| Chain sequence(s) |
A: QPVSDVDPIPEDHVLVHEDAHQEVLQHSRQKRATCDLLSKWNWNHTACAGHCIAKGFKGGYCNDKAVCVCRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 21 | Q | A | -0.9136 | |
| 22 | P | A | -0.2130 | |
| 23 | V | A | 1.0562 | |
| 24 | S | A | -0.1308 | |
| 25 | D | A | -1.0858 | |
| 26 | V | A | 0.1751 | |
| 27 | D | A | -1.0088 | |
| 28 | P | A | -0.1198 | |
| 29 | I | A | 0.8501 | |
| 30 | P | A | -1.1293 | |
| 31 | E | A | -2.3835 | |
| 32 | D | A | -2.2940 | |
| 33 | H | A | -0.8337 | |
| 34 | V | A | 1.6510 | |
| 35 | L | A | 2.2701 | |
| 36 | V | A | 1.7394 | |
| 37 | H | A | -0.9114 | |
| 38 | E | A | -2.5481 | |
| 39 | D | A | -3.0997 | |
| 40 | A | A | -2.0557 | |
| 41 | H | A | -2.2543 | |
| 42 | Q | A | -2.1408 | |
| 43 | E | A | -1.5202 | |
| 44 | V | A | 0.5829 | |
| 45 | L | A | 0.8231 | |
| 46 | Q | A | -0.8787 | |
| 47 | H | A | -1.7318 | |
| 48 | S | A | -2.1408 | |
| 49 | R | A | -3.6991 | |
| 50 | Q | A | -3.6634 | |
| 51 | K | A | -3.7259 | |
| 52 | R | A | -3.1110 | |
| 53 | A | A | -1.3469 | |
| 54 | T | A | -0.9682 | |
| 55 | C | A | 0.0000 | |
| 56 | D | A | -1.3712 | |
| 57 | L | A | 0.5423 | |
| 58 | L | A | -0.0000 | |
| 59 | S | A | -0.9116 | |
| 60 | K | A | -1.2763 | |
| 61 | W | A | 0.1920 | |
| 62 | N | A | -0.8602 | |
| 63 | W | A | 0.2234 | |
| 64 | N | A | -0.4630 | |
| 65 | H | A | -0.5002 | |
| 66 | T | A | -0.1302 | |
| 67 | A | A | 0.4538 | |
| 68 | C | A | 0.0000 | |
| 69 | A | A | -0.0478 | |
| 70 | G | A | -0.0554 | |
| 71 | H | A | -0.0629 | |
| 72 | C | A | 0.0000 | |
| 73 | I | A | 0.6554 | |
| 74 | A | A | -0.1235 | |
| 75 | K | A | -1.2556 | |
| 76 | G | A | -0.8920 | |
| 77 | F | A | -0.7469 | |
| 78 | K | A | -1.8311 | |
| 79 | G | A | 0.0000 | |
| 80 | G | A | -0.1827 | |
| 81 | Y | A | 0.1968 | |
| 82 | C | A | -0.6060 | |
| 83 | N | A | -1.4266 | |
| 84 | D | A | -2.6187 | |
| 85 | K | A | -2.7657 | |
| 86 | A | A | -1.4493 | |
| 87 | V | A | -1.0222 | |
| 88 | C | A | 0.0000 | |
| 89 | V | A | -0.1032 | |
| 90 | C | A | -0.8356 | |
| 91 | R | A | -1.9964 | |
| 92 | N | A | -1.8630 |