| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTVGHPLFNKLGDTENPTAPVHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGAPLPAEPPPSPLYVRPPPSSPHAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8949 | |
| 2 | L | A | 1.8213 | |
| 3 | P | A | 0.5199 | |
| 4 | P | A | 0.1640 | |
| 5 | T | A | -0.0500 | |
| 6 | T | A | -0.0621 | |
| 7 | P | A | 0.2698 | |
| 8 | V | A | 1.2417 | |
| 9 | A | A | 0.0568 | |
| 10 | K | A | -0.9946 | |
| 11 | V | A | -0.1240 | |
| 12 | Q | A | -1.3670 | |
| 13 | S | A | -1.5367 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4313 | |
| 16 | E | A | -2.4416 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4538 | |
| 20 | P | A | 0.1254 | |
| 21 | T | A | 0.1595 | |
| 22 | S | A | -0.0963 | |
| 23 | L | A | 0.0908 | |
| 24 | F | A | -0.0327 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2840 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8993 | |
| 31 | R | A | -2.6843 | |
| 32 | L | A | -0.8001 | |
| 33 | L | A | 1.1589 | |
| 34 | T | A | 1.3783 | |
| 35 | V | A | 1.8565 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2091 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6039 | |
| 40 | K | A | -1.6189 | |
| 41 | D | A | -0.9054 | |
| 42 | I | A | 0.8623 | |
| 43 | V | A | 1.0367 | |
| 44 | K | A | -1.1775 | |
| 45 | N | A | -1.9311 | |
| 46 | G | A | -1.2282 | |
| 47 | K | A | -0.9724 | |
| 48 | V | A | 1.4535 | |
| 49 | V | A | 2.0384 | |
| 50 | V | A | 1.2604 | |
| 51 | P | A | 0.4440 | |
| 52 | K | A | -0.6316 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1396 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3907 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2600 | |
| 70 | K | A | -1.7830 | |
| 71 | F | A | -0.6339 | |
| 72 | A | A | -0.5822 | |
| 73 | L | A | -0.8744 | |
| 74 | P | A | -1.2107 | |
| 75 | Q | A | -2.5057 | |
| 76 | K | A | -3.1090 | |
| 77 | D | A | -2.9910 | |
| 78 | F | A | -1.6721 | |
| 79 | Y | A | -1.8932 | |
| 80 | D | A | -2.6915 | |
| 81 | P | A | -2.3070 | |
| 82 | E | A | -3.0493 | |
| 83 | K | A | -3.3968 | |
| 84 | E | A | -2.4622 | |
| 85 | R | A | -1.2920 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6668 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9637 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3598 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6924 | |
| 99 | G | A | -0.5260 | |
| 100 | P | A | -0.3617 | |
| 101 | L | A | 0.1318 | |
| 102 | G | A | -0.0986 | |
| 103 | R | A | -0.4008 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3187 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1753 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4273 | |
| 110 | L | A | 0.3008 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0979 | |
| 113 | K | A | -0.4033 | |
| 114 | L | A | -0.8202 | |
| 115 | G | A | -0.8951 | |
| 116 | D | A | -1.2663 | |
| 117 | T | A | -0.8905 | |
| 118 | E | A | -1.7690 | |
| 119 | N | A | -1.9908 | |
| 120 | P | A | -1.3886 | |
| 121 | T | A | -0.7088 | |
| 122 | A | A | -0.4639 | |
| 123 | P | A | -0.2778 | |
| 124 | V | A | -0.3669 | |
| 125 | H | A | -0.6256 | |
| 126 | C | A | -0.7785 | |
| 127 | G | A | -1.2545 | |
| 128 | A | A | -1.1759 | |
| 129 | D | A | -2.1874 | |
| 130 | D | A | -1.7514 | |
| 131 | R | A | -1.1230 | |
| 132 | V | A | 0.2418 | |
| 133 | A | A | 0.4529 | |
| 134 | F | A | 0.2789 | |
| 135 | S | A | -0.0310 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5695 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1979 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1618 | |
| 157 | D | A | 0.5327 | |
| 158 | L | A | 1.2398 | |
| 159 | A | A | 1.0710 | |
| 160 | A | A | 0.3905 | |
| 161 | P | A | 0.6085 | |
| 162 | C | A | 0.5841 | |
| 163 | P | A | 0.0468 | |
| 164 | G | A | -0.0933 | |
| 165 | L | A | 0.5656 | |
| 166 | P | A | -0.1191 | |
| 167 | P | A | -0.3414 | |
| 168 | G | A | -0.4522 | |
| 169 | A | A | 0.0907 | |
| 170 | C | A | 0.7848 | |
| 171 | P | A | 0.7892 | |
| 172 | P | A | 1.2369 | |
| 173 | I | A | 2.3039 | |
| 174 | Q | A | 1.1430 | |
| 175 | L | A | 1.4959 | |
| 176 | V | A | 0.8617 | |
| 177 | N | A | -0.2966 | |
| 178 | S | A | 0.0273 | |
| 179 | V | A | 0.4305 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3802 | |
| 182 | D | A | 0.0778 | |
| 183 | G | A | -0.1643 | |
| 184 | D | A | -0.5379 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1386 | |
| 190 | F | A | 0.0629 | |
| 191 | G | A | -0.1067 | |
| 192 | N | A | -0.2580 | |
| 193 | M | A | -0.1178 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4212 | |
| 197 | E | A | -2.6630 | |
| 198 | L | A | -1.2558 | |
| 199 | Q | A | -2.5771 | |
| 200 | Q | A | -3.3197 | |
| 201 | D | A | -3.5676 | |
| 202 | R | A | -3.3274 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2094 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3432 | |
| 211 | S | A | -1.8873 | |
| 212 | T | A | -1.4383 | |
| 213 | R | A | -2.0822 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1603 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3773 | |
| 220 | L | A | 0.6102 | |
| 221 | K | A | -1.0991 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8120 | |
| 224 | N | A | -1.4919 | |
| 225 | E | A | -1.2388 | |
| 226 | A | A | -0.5924 | |
| 227 | Y | A | -0.3618 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6811 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0864 | |
| 234 | F | A | 0.2735 | |
| 235 | G | A | -0.7851 | |
| 236 | R | A | -2.5434 | |
| 237 | R | A | -2.7462 | |
| 238 | E | A | -2.0686 | |
| 239 | Q | A | -0.0989 | |
| 240 | V | A | 1.4779 | |
| 241 | Y | A | 1.2016 | |
| 242 | A | A | 0.3581 | |
| 243 | R | A | -0.6226 | |
| 244 | H | A | -0.8109 | |
| 245 | F | A | 0.0846 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6185 | |
| 249 | C | A | -0.9318 | |
| 250 | G | A | -0.9570 | |
| 251 | P | A | -0.8389 | |
| 252 | D | A | -1.0436 | |
| 253 | G | A | -0.8070 | |
| 254 | A | A | -0.3954 | |
| 255 | P | A | -0.3427 | |
| 256 | L | A | 0.5487 | |
| 257 | P | A | -0.0802 | |
| 258 | A | A | -0.6991 | |
| 259 | E | A | -1.4677 | |
| 260 | P | A | -1.2370 | |
| 261 | P | A | -0.7544 | |
| 262 | P | A | -0.4722 | |
| 263 | S | A | -0.1630 | |
| 264 | P | A | 0.5056 | |
| 265 | L | A | 1.5723 | |
| 266 | Y | A | 1.2115 | |
| 267 | V | A | 0.9409 | |
| 268 | R | A | -1.1271 | |
| 269 | P | A | -0.5940 | |
| 270 | P | A | -0.8763 | |
| 271 | P | A | -0.6745 | |
| 272 | S | A | -0.4502 | |
| 273 | S | A | -0.4664 | |
| 274 | P | A | -0.4540 | |
| 275 | H | A | -0.6499 | |
| 276 | A | A | 0.0346 | |
| 277 | V | A | 1.4988 | |
| 278 | L | A | 0.9361 | |
| 279 | P | A | 0.1468 | |
| 280 | P | A | -0.1679 | |
| 281 | T | A | -0.3807 | |
| 282 | D | A | -1.0479 | |
| 283 | Y | A | 0.7084 | |
| 284 | F | A | 0.6268 | |
| 285 | G | A | 0.3099 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 1.0455 | |
| 291 | L | A | 1.6657 | |
| 292 | V | A | 0.6573 | |
| 293 | S | A | -0.1399 | |
| 294 | S | A | -0.9482 | |
| 295 | D | A | -1.8409 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0746 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6312 | |
| 301 | R | A | -1.8326 | |
| 302 | P | A | -0.9742 | |
| 303 | F | A | -0.1892 | |
| 304 | W | A | -0.5710 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0888 | |
| 307 | R | A | -2.8380 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2576 | |
| 310 | G | A | -1.2260 | |
| 311 | N | A | -1.2671 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8492 | |
| 319 | N | A | -0.9446 | |
| 320 | E | A | -1.0399 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2781 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0050 | |
| 333 | N | A | 0.5891 | |
| 334 | F | A | 1.7743 | |
| 335 | T | A | 0.8859 | |
| 336 | I | A | 0.4556 | |
| 337 | S | A | -0.8296 | |
| 338 | Q | A | -1.4921 | |
| 339 | Q | A | -0.8632 | |
| 340 | L | A | 0.8320 | |
| 341 | C | A | 0.4591 | |
| 342 | T | A | 0.1783 | |
| 343 | P | A | -0.2503 | |
| 344 | P | A | 0.0751 | |
| 345 | I | A | 0.5891 | |
| 346 | N | A | -0.0475 | |
| 347 | V | A | 1.7103 | |
| 348 | Y | A | 1.5481 | |
| 349 | D | A | 0.0851 | |
| 350 | P | A | -0.3308 | |
| 351 | S | A | -0.2729 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5933 | |
| 354 | K | A | -1.6720 | |
| 355 | N | A | -1.7079 | |
| 356 | Y | A | -0.0969 | |
| 357 | L | A | 0.6493 | |
| 358 | R | A | 0.9862 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3976 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0842 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0557 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6911 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3018 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3321 | |
| 376 | L | A | -1.7474 | |
| 377 | D | A | -2.0285 | |
| 378 | P | A | -0.8848 | |
| 379 | G | A | -0.8996 | |
| 380 | V | A | -0.9346 | |
| 381 | L | A | -0.2646 | |
| 382 | A | A | -0.0062 | |
| 383 | H | A | -0.5467 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3972 | |
| 386 | T | A | 0.0021 | |
| 387 | M | A | -0.0960 | |
| 388 | N | A | -0.6511 | |
| 389 | P | A | -0.9920 | |
| 390 | T | A | -1.3584 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3521 | |
| 393 | E | A | -2.7403 | |
| 394 | N | A | -2.2989 | |
| 395 | W | A | -1.4200 | |
| 396 | N | A | -1.1531 | |
| 397 | L | A | -0.2202 | |
| 398 | G | A | 0.5036 | |
| 399 | F | A | 2.4118 | |
| 400 | V | A | 1.8338 | |
| 401 | P | A | 0.0557 | |
| 402 | P | A | -1.9004 | |
| 403 | K | A | -3.2610 | |
| 404 | E | A | -3.8322 | |
| 405 | R | A | -4.0333 | |
| 406 | E | A | -3.8519 | |
| 407 | D | A | -2.9089 | |
| 408 | P | A | -1.7853 | |
| 409 | Y | A | -0.9894 | |
| 410 | K | A | -2.1188 | |
| 411 | G | A | -0.6398 | |
| 412 | L | A | 0.6780 | |
| 413 | I | A | 1.5908 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3937 | |
| 416 | E | A | -1.6811 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9435 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0399 | |
| 421 | E | A | -2.7711 | |
| 422 | R | A | -2.6158 | |
| 423 | F | A | -1.2731 | |
| 424 | S | A | -1.4680 | |
| 425 | Q | A | -1.8563 | |
| 426 | D | A | -2.9735 | |
| 427 | L | A | -2.1733 | |
| 428 | D | A | -3.0311 | |
| 429 | Q | A | -2.7580 | |
| 430 | F | A | -1.6254 | |
| 431 | A | A | -1.1587 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3471 | |
| 435 | K | A | -1.1217 | |
| 436 | F | A | -0.1220 | |
| 437 | L | A | 0.7660 | |
| 438 | Y | A | 0.6098 | |
| 439 | Q | A | -0.3953 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine