Project name: GapC103_tagged_rank1_A3D_static_d10

Status: done

Started: 2026-07-24 04:15:29
Settings
Chain sequence(s) A: MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKLEHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-2.8807
Maximal score value
1.8817
Average score
-0.938
Total score value
-96.6128

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7704
2 G A -0.0924
3 S A -0.5595
4 S A -1.1526
5 H A -1.8569
6 H A -2.2584
7 H A -2.4237
8 H A -2.4212
9 H A -2.2623
10 H A -1.9045
11 S A -1.0034
12 S A -0.3174
13 G A 0.4812
14 L A 1.8817
15 V A 1.8657
16 P A -0.1318
17 R A -1.8530
18 G A -1.4723
19 S A -1.2305
20 H A -0.8777
21 M A 0.5507
22 A A 0.5115
23 S A 0.4960
24 M A 0.8495
25 T A -0.1446
26 G A -1.0424
27 G A -1.3559
28 Q A -1.9012
29 Q A -1.9674
30 M A -0.8465
31 G A -1.6669
32 R A -2.0638
33 G A -0.9699
34 S A -0.0916
35 M A 1.3067
36 V A 1.5472
37 V A 1.4106
38 K A -0.8779
39 V A -0.5734
40 G A -1.6795
41 I A -0.9276
42 N A -1.6273
43 G A -0.7987
44 F A 0.0000
45 G A -0.0603
46 R A 0.1495
47 I A 1.5580
48 G A 0.2459
49 R A 0.2510
50 L A 0.4051
51 A A 0.0929
52 F A -0.3734
53 R A -1.3154
54 R A -2.0816
55 I A -1.4975
56 Q A -2.4135
57 N A -2.3184
58 V A -1.4390
59 E A -1.6389
60 G A -0.3078
61 V A -0.1155
62 E A -1.5415
63 V A -0.9511
64 T A -1.2713
65 R A -2.4036
66 I A -1.0473
67 N A -1.7981
68 D A -1.0305
69 L A 0.4884
70 T A -0.5152
71 D A -1.6528
72 P A -1.4758
73 N A -1.7791
74 M A -0.6901
75 L A -0.3099
76 A A -0.8713
77 H A -0.8997
78 L A -0.1650
79 L A 0.0000
80 K A -1.1899
81 Y A -0.1672
82 D A 0.0000
83 T A -0.4928
84 T A -0.7473
85 Q A -1.3724
86 G A -1.6108
87 R A -2.4147
88 F A -1.8206
89 D A -2.4943
90 G A -1.6900
91 T A -0.8895
92 V A -1.1884
93 E A -1.9861
94 V A -1.1889
95 K A -1.8469
96 L A -0.7861
97 E A -2.3100
98 H A -2.5415
99 H A -2.6812
100 H A -2.8807
101 H A -2.6439
102 H A -2.3570
103 H A -1.8588
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Laboratory of Theory of Biopolymers 2018