Project name: GGKGHFG

Status: done

Started: 2026-02-23 08:04:36
Settings
Chain sequence(s) A: GGKGHFG
C: GGKGHFG
B: GGKGHFG
D: GGKGHFG
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:43)
Show buried residues

Minimal score value
-2.9457
Maximal score value
0.3366
Average score
-1.3959
Total score value
-39.0854

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.3529
2 G A -1.4884
3 K A -1.9672
4 G A 0.0000
5 H A -1.7909
6 F A -1.1749
7 G A -0.7329
1 G B -1.0610
2 G B -1.3931
3 K B -2.3172
4 G B 0.0000
5 H B -2.1264
6 F B -1.3229
7 G B -1.6664
1 G C -0.7930
2 G C -1.0952
3 K C -2.4173
4 G C 0.0000
5 H C -2.1267
6 F C -1.7007
7 G C -1.3676
1 G D -1.6480
2 G D -2.3867
3 K D -2.9457
4 G D -2.0964
5 H D -2.0254
6 F D 0.3366
7 G D -0.4251
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018