| Chain sequence(s) |
A: KTDELAAKSSIAAIELLTELAIESIKRKAKEAEKRDGEEAKKEIEEIAKQTIEAIESIAEKTEEVLKSEENKKRVREAAKKAIERVKEAAKRGIKEIEKLE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:41)
[INFO] Main: Simulation completed successfully. (00:04:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.7061 | |
| 2 | T | A | -0.9039 | |
| 3 | D | A | -1.1035 | |
| 4 | E | A | -1.5085 | |
| 5 | L | A | -0.1724 | |
| 6 | A | A | -0.1543 | |
| 7 | A | A | 0.0000 | |
| 8 | K | A | -1.1073 | |
| 9 | S | A | -0.5994 | |
| 10 | S | A | 0.0000 | |
| 11 | I | A | -0.7235 | |
| 12 | A | A | -0.3039 | |
| 13 | A | A | -0.0454 | |
| 14 | I | A | 0.0000 | |
| 15 | E | A | -0.9892 | |
| 16 | L | A | 0.9833 | |
| 17 | L | A | 0.6363 | |
| 18 | T | A | 0.0000 | |
| 19 | E | A | -0.4838 | |
| 20 | L | A | 0.6359 | |
| 21 | A | A | 0.0000 | |
| 22 | I | A | -1.2822 | |
| 23 | E | A | -2.4073 | |
| 24 | S | A | -1.9929 | |
| 25 | I | A | 0.0000 | |
| 26 | K | A | -3.7259 | |
| 27 | R | A | -4.0349 | |
| 28 | K | A | -3.9438 | |
| 29 | A | A | 0.0000 | |
| 30 | K | A | -4.5526 | |
| 31 | E | A | -4.6383 | |
| 32 | A | A | 0.0000 | |
| 33 | E | A | -4.4134 | |
| 34 | K | A | -4.4636 | |
| 35 | R | A | -5.1151 | |
| 36 | D | A | -4.7844 | |
| 37 | G | A | -4.8689 | |
| 38 | E | A | -4.5198 | |
| 39 | E | A | -4.3129 | |
| 40 | A | A | 0.0000 | |
| 41 | K | A | -4.2011 | |
| 42 | K | A | -4.1315 | |
| 43 | E | A | -3.7220 | |
| 44 | I | A | 0.0000 | |
| 45 | E | A | -3.7087 | |
| 46 | E | A | -3.7480 | |
| 47 | I | A | -2.4763 | |
| 48 | A | A | 0.0000 | |
| 49 | K | A | -3.6531 | |
| 50 | Q | A | -3.1492 | |
| 51 | T | A | 0.0000 | |
| 52 | I | A | -2.3786 | |
| 53 | E | A | -2.7752 | |
| 54 | A | A | -1.6856 | |
| 55 | I | A | 0.0000 | |
| 56 | E | A | -2.7194 | |
| 57 | S | A | -1.9534 | |
| 58 | I | A | -1.4606 | |
| 59 | A | A | 0.0000 | |
| 60 | E | A | -3.5388 | |
| 61 | K | A | -3.0641 | |
| 62 | T | A | 0.0000 | |
| 63 | E | A | -3.2764 | |
| 64 | E | A | -2.6518 | |
| 65 | V | A | -0.4497 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.5502 | |
| 68 | S | A | -2.6871 | |
| 69 | E | A | -3.9484 | |
| 70 | E | A | -3.9391 | |
| 71 | N | A | 0.0000 | |
| 72 | K | A | -4.2534 | |
| 73 | K | A | -4.5911 | |
| 74 | R | A | -3.9759 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -4.6170 | |
| 77 | E | A | -4.4402 | |
| 78 | A | A | -3.2500 | |
| 79 | A | A | 0.0000 | |
| 80 | K | A | -4.2875 | |
| 81 | K | A | -4.1611 | |
| 82 | A | A | 0.0000 | |
| 83 | I | A | -3.2915 | |
| 84 | E | A | -3.7085 | |
| 85 | R | A | -3.0919 | |
| 86 | V | A | 0.0000 | |
| 87 | K | A | -3.5273 | |
| 88 | E | A | -3.5953 | |
| 89 | A | A | -3.0993 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -4.1958 | |
| 92 | R | A | -4.4544 | |
| 93 | G | A | 0.0000 | |
| 94 | I | A | -3.9695 | |
| 95 | K | A | -4.3746 | |
| 96 | E | A | -4.4565 | |
| 97 | I | A | 0.0000 | |
| 98 | E | A | -4.3946 | |
| 99 | K | A | -3.5192 | |
| 100 | L | A | -2.1968 | |
| 101 | E | A | -3.2519 |