| Chain sequence(s) |
A: GGAPAIRSTDEFVTPTDLLYVAETDLLTETGNPFKDIVVNGKVLIPKVSAYQYRVFKLTLPDPNKLPLPRPDFVDPSTEILIWRLKAFKIGVGGPLGKGTYGHPNFNALGDVDNPTEPVHETEDDRQNLSFTPVLRQEFIIGDEPPLAKYTAPAPPAPGLPPGATPPTTVVTTTIEHGDMADIGFGAKDYAALEPSKDRVPDIILNTTTKVIDYDGMKAEPYGTRMFDYDKYEKSKDVKKLVRDGPDPHPLPDAPPPSPLYVPPPPSSPYAEPPPTDYFTIPDAGEITAADELFNKPRYLTKTPGKNQGILWYNQLYVTVLDNSRAAIETITKQISTPLPNVYDPSNYVTSLRYTREYQLSFILQLCKIPLTPETLAEIERRDPRILVNSNLPDIPPVEREDPYKGKKFHEIDLTNKLSTDLSKTPLGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7071 | |
| 2 | G | A | -0.7145 | |
| 3 | A | A | -0.3107 | |
| 4 | P | A | -0.3342 | |
| 5 | A | A | -0.0385 | |
| 6 | I | A | -0.1475 | |
| 7 | R | A | -1.3098 | |
| 8 | S | A | -1.7987 | |
| 9 | T | A | 0.0000 | |
| 10 | D | A | -3.1916 | |
| 11 | E | A | -2.9735 | |
| 12 | F | A | 0.0000 | |
| 13 | V | A | 0.0000 | |
| 14 | T | A | -0.9643 | |
| 15 | P | A | -0.9823 | |
| 16 | T | A | -0.9444 | |
| 17 | D | A | -1.6862 | |
| 18 | L | A | -0.5702 | |
| 19 | L | A | -0.2951 | |
| 20 | Y | A | 0.0000 | |
| 21 | V | A | 0.0000 | |
| 22 | A | A | 0.0000 | |
| 23 | E | A | -1.0817 | |
| 24 | T | A | 0.0000 | |
| 25 | D | A | -1.2846 | |
| 26 | L | A | 0.3804 | |
| 27 | L | A | 0.0145 | |
| 28 | T | A | -0.2447 | |
| 29 | E | A | -0.4833 | |
| 30 | T | A | -0.4117 | |
| 31 | G | A | 0.0000 | |
| 32 | N | A | -0.9259 | |
| 33 | P | A | 0.0000 | |
| 34 | F | A | -0.8878 | |
| 35 | K | A | -1.7721 | |
| 36 | D | A | -0.6225 | |
| 37 | I | A | 1.3030 | |
| 38 | V | A | 2.2574 | |
| 39 | V | A | 1.6273 | |
| 40 | N | A | -0.5627 | |
| 41 | G | A | -0.3957 | |
| 42 | K | A | -0.1379 | |
| 43 | V | A | 1.9702 | |
| 44 | L | A | 2.5344 | |
| 45 | I | A | 1.2454 | |
| 46 | P | A | 0.0262 | |
| 47 | K | A | -0.9725 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | Y | A | 0.0000 | |
| 52 | Q | A | 0.0000 | |
| 53 | Y | A | 0.0000 | |
| 54 | R | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | F | A | 0.0000 | |
| 57 | K | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.2153 | |
| 60 | L | A | 0.0000 | |
| 61 | P | A | 0.0000 | |
| 62 | D | A | -1.5535 | |
| 63 | P | A | 0.0000 | |
| 64 | N | A | -2.2396 | |
| 65 | K | A | -2.3074 | |
| 66 | L | A | -1.0812 | |
| 67 | P | A | -0.8362 | |
| 68 | L | A | -0.9191 | |
| 69 | P | A | -1.1909 | |
| 70 | R | A | -2.4344 | |
| 71 | P | A | -2.0356 | |
| 72 | D | A | -2.6047 | |
| 73 | F | A | -1.5309 | |
| 74 | V | A | -1.5313 | |
| 75 | D | A | -1.9269 | |
| 76 | P | A | -1.5084 | |
| 77 | S | A | -0.9679 | |
| 78 | T | A | -0.7674 | |
| 79 | E | A | -1.0363 | |
| 80 | I | A | -0.7859 | |
| 81 | L | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | W | A | 0.0000 | |
| 84 | R | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -0.5639 | |
| 87 | A | A | 0.0000 | |
| 88 | F | A | 0.0000 | |
| 89 | K | A | -1.2169 | |
| 90 | I | A | 0.0000 | |
| 91 | G | A | -0.7588 | |
| 92 | V | A | 0.0000 | |
| 93 | G | A | -0.4759 | |
| 94 | G | A | -0.5938 | |
| 95 | P | A | -0.2877 | |
| 96 | L | A | 0.1937 | |
| 97 | G | A | -0.4143 | |
| 98 | K | A | -0.9773 | |
| 99 | G | A | 0.0000 | |
| 100 | T | A | -0.2667 | |
| 101 | Y | A | 0.0000 | |
| 102 | G | A | -0.7099 | |
| 103 | H | A | -1.6117 | |
| 104 | P | A | -1.7968 | |
| 105 | N | A | -2.7494 | |
| 106 | F | A | 0.0000 | |
| 107 | N | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | G | A | -1.5500 | |
| 111 | D | A | -2.3471 | |
| 112 | V | A | -1.8190 | |
| 113 | D | A | -2.6044 | |
| 114 | N | A | -2.7127 | |
| 115 | P | A | -1.9675 | |
| 116 | T | A | -1.6095 | |
| 117 | E | A | -2.3034 | |
| 118 | P | A | -1.2937 | |
| 119 | V | A | -1.2621 | |
| 120 | H | A | -2.1496 | |
| 121 | E | A | -2.8749 | |
| 122 | T | A | -2.6959 | |
| 123 | E | A | -3.2524 | |
| 124 | D | A | -3.6819 | |
| 125 | D | A | -3.0339 | |
| 126 | R | A | -3.1627 | |
| 127 | Q | A | -2.6874 | |
| 128 | N | A | -2.2964 | |
| 129 | L | A | -1.2074 | |
| 130 | S | A | -0.6605 | |
| 131 | F | A | 0.0000 | |
| 132 | T | A | -0.2025 | |
| 133 | P | A | 0.0000 | |
| 134 | V | A | -1.0900 | |
| 135 | L | A | 0.0000 | |
| 136 | R | A | 0.0000 | |
| 137 | Q | A | 0.0000 | |
| 138 | E | A | 0.0000 | |
| 139 | F | A | 0.0000 | |
| 140 | I | A | 0.0000 | |
| 141 | I | A | 0.0000 | |
| 142 | G | A | 0.0000 | |
| 143 | D | A | 0.0000 | |
| 144 | E | A | -0.3378 | |
| 145 | P | A | 0.0000 | |
| 146 | P | A | 0.0000 | |
| 147 | L | A | -0.2685 | |
| 148 | A | A | 0.0000 | |
| 149 | K | A | -0.0591 | |
| 150 | Y | A | 0.3113 | |
| 151 | T | A | 0.4676 | |
| 152 | A | A | 0.2560 | |
| 153 | P | A | -0.0488 | |
| 154 | A | A | -0.0340 | |
| 155 | P | A | -0.4784 | |
| 156 | P | A | -0.4278 | |
| 157 | A | A | -0.2271 | |
| 158 | P | A | -0.3660 | |
| 159 | G | A | -0.3164 | |
| 160 | L | A | 0.1838 | |
| 161 | P | A | -0.2520 | |
| 162 | P | A | -0.4642 | |
| 163 | G | A | -0.5937 | |
| 164 | A | A | -0.3268 | |
| 165 | T | A | -0.2842 | |
| 166 | P | A | -0.2771 | |
| 167 | P | A | -0.2700 | |
| 168 | T | A | 0.1303 | |
| 169 | T | A | 0.8060 | |
| 170 | V | A | 1.7685 | |
| 171 | V | A | 1.0428 | |
| 172 | T | A | 0.3417 | |
| 173 | T | A | 0.1338 | |
| 174 | T | A | -0.4966 | |
| 175 | I | A | 0.0000 | |
| 176 | E | A | -1.2191 | |
| 177 | H | A | -1.2537 | |
| 178 | G | A | -0.7070 | |
| 179 | D | A | -0.6464 | |
| 180 | M | A | 0.0000 | |
| 181 | A | A | 0.0000 | |
| 182 | D | A | -0.1724 | |
| 183 | I | A | 0.0000 | |
| 184 | G | A | -0.5579 | |
| 185 | F | A | -0.0323 | |
| 186 | G | A | -0.2551 | |
| 187 | A | A | -0.1358 | |
| 188 | K | A | -0.1959 | |
| 189 | D | A | -0.5913 | |
| 190 | Y | A | 0.0000 | |
| 191 | A | A | -1.0001 | |
| 192 | A | A | -0.3947 | |
| 193 | L | A | -0.5302 | |
| 194 | E | A | -1.1694 | |
| 195 | P | A | -1.1917 | |
| 196 | S | A | -1.2827 | |
| 197 | K | A | -2.5170 | |
| 198 | D | A | -2.0121 | |
| 199 | R | A | -1.3966 | |
| 200 | V | A | 0.0000 | |
| 201 | P | A | 0.0000 | |
| 202 | D | A | -1.4390 | |
| 203 | I | A | 0.0000 | |
| 204 | I | A | 0.0000 | |
| 205 | L | A | -1.3930 | |
| 206 | N | A | -1.6579 | |
| 207 | T | A | -0.7836 | |
| 208 | T | A | -0.4962 | |
| 209 | T | A | 0.0000 | |
| 210 | K | A | 0.0000 | |
| 211 | V | A | 0.0991 | |
| 212 | I | A | 0.0000 | |
| 213 | D | A | -1.0434 | |
| 214 | Y | A | -1.3799 | |
| 215 | D | A | -2.4763 | |
| 216 | G | A | -1.7259 | |
| 217 | M | A | 0.0000 | |
| 218 | K | A | -2.5662 | |
| 219 | A | A | -1.4713 | |
| 220 | E | A | -1.3117 | |
| 221 | P | A | -0.7484 | |
| 222 | Y | A | -0.7340 | |
| 223 | G | A | 0.0000 | |
| 224 | T | A | 0.0000 | |
| 225 | R | A | -0.6244 | |
| 226 | M | A | 0.0000 | |
| 227 | F | A | 0.0000 | |
| 228 | D | A | -0.6255 | |
| 229 | Y | A | -0.5244 | |
| 230 | D | A | -1.1554 | |
| 231 | K | A | -1.9386 | |
| 232 | Y | A | -1.6571 | |
| 233 | E | A | -2.4713 | |
| 234 | K | A | -2.2404 | |
| 235 | S | A | -2.1925 | |
| 236 | K | A | -2.6027 | |
| 237 | D | A | -2.4447 | |
| 238 | V | A | -0.8821 | |
| 239 | K | A | -2.3562 | |
| 240 | K | A | -2.3673 | |
| 241 | L | A | 0.0000 | |
| 242 | V | A | 0.0000 | |
| 243 | R | A | 0.0000 | |
| 244 | D | A | -1.8409 | |
| 245 | G | A | -1.3176 | |
| 246 | P | A | -1.3214 | |
| 247 | D | A | -1.6829 | |
| 248 | P | A | -1.4039 | |
| 249 | H | A | -1.5371 | |
| 250 | P | A | -1.1880 | |
| 251 | L | A | -0.1374 | |
| 252 | P | A | -0.7519 | |
| 253 | D | A | -1.6826 | |
| 254 | A | A | -0.5811 | |
| 255 | P | A | -0.7212 | |
| 256 | P | A | -0.2017 | |
| 257 | P | A | 0.0925 | |
| 258 | S | A | 0.3291 | |
| 259 | P | A | 0.7228 | |
| 260 | L | A | 1.7607 | |
| 261 | Y | A | 1.6470 | |
| 262 | V | A | 1.9531 | |
| 263 | P | A | 0.4265 | |
| 264 | P | A | 0.0343 | |
| 265 | P | A | -0.2037 | |
| 266 | P | A | -0.6679 | |
| 267 | S | A | -0.5393 | |
| 268 | S | A | -0.3911 | |
| 269 | P | A | -0.6678 | |
| 270 | Y | A | -0.1949 | |
| 271 | A | A | -0.8123 | |
| 272 | E | A | -1.8686 | |
| 273 | P | A | -1.1448 | |
| 274 | P | A | -1.1206 | |
| 275 | P | A | -1.1146 | |
| 276 | T | A | -0.5244 | |
| 277 | D | A | -0.9640 | |
| 278 | Y | A | 0.3139 | |
| 279 | F | A | -0.0910 | |
| 280 | T | A | -1.0847 | |
| 281 | I | A | 0.0000 | |
| 282 | P | A | 0.0000 | |
| 283 | D | A | -1.5050 | |
| 284 | A | A | 0.0000 | |
| 285 | G | A | 0.0000 | |
| 286 | E | A | -2.1702 | |
| 287 | I | A | -0.8763 | |
| 288 | T | A | -0.4075 | |
| 289 | A | A | -0.0043 | |
| 290 | A | A | -0.1773 | |
| 291 | D | A | -0.7853 | |
| 292 | E | A | -0.5246 | |
| 293 | L | A | -0.7925 | |
| 294 | F | A | 0.0000 | |
| 295 | N | A | -1.6581 | |
| 296 | K | A | -2.2098 | |
| 297 | P | A | -1.4899 | |
| 298 | R | A | -1.1107 | |
| 299 | Y | A | -0.5400 | |
| 300 | L | A | 0.0000 | |
| 301 | T | A | -0.9686 | |
| 302 | K | A | -2.1760 | |
| 303 | T | A | 0.0000 | |
| 304 | P | A | -1.2393 | |
| 305 | G | A | -1.4130 | |
| 306 | K | A | -1.8784 | |
| 307 | N | A | 0.0000 | |
| 308 | Q | A | -1.5575 | |
| 309 | G | A | 0.0000 | |
| 310 | I | A | 0.0000 | |
| 311 | L | A | 0.0000 | |
| 312 | W | A | 0.0000 | |
| 313 | Y | A | -0.4332 | |
| 314 | N | A | -0.4305 | |
| 315 | Q | A | -0.5887 | |
| 316 | L | A | 0.0000 | |
| 317 | Y | A | 0.0000 | |
| 318 | V | A | 0.0000 | |
| 319 | T | A | 0.0000 | |
| 320 | V | A | 0.0000 | |
| 321 | L | A | 0.0000 | |
| 322 | D | A | 0.0000 | |
| 323 | N | A | 0.0000 | |
| 324 | S | A | 0.0000 | |
| 325 | R | A | 0.0000 | |
| 326 | A | A | 0.0000 | |
| 327 | A | A | -0.6239 | |
| 328 | I | A | -0.5294 | |
| 329 | E | A | -1.2840 | |
| 330 | T | A | -0.0480 | |
| 331 | I | A | 0.9551 | |
| 332 | T | A | 0.2967 | |
| 333 | K | A | -0.5356 | |
| 334 | Q | A | 0.3645 | |
| 335 | I | A | 1.8316 | |
| 336 | S | A | 0.7983 | |
| 337 | T | A | 0.5602 | |
| 338 | P | A | 0.4443 | |
| 339 | L | A | 1.6263 | |
| 340 | P | A | 0.6501 | |
| 341 | N | A | 0.0755 | |
| 342 | V | A | 1.7327 | |
| 343 | Y | A | 1.5610 | |
| 344 | D | A | -0.1234 | |
| 345 | P | A | 0.1339 | |
| 346 | S | A | 0.0925 | |
| 347 | N | A | 0.7258 | |
| 348 | Y | A | 0.8495 | |
| 349 | V | A | 1.3474 | |
| 350 | T | A | 0.6565 | |
| 351 | S | A | 0.3083 | |
| 352 | L | A | 0.1662 | |
| 353 | R | A | -0.4020 | |
| 354 | Y | A | 0.0000 | |
| 355 | T | A | -0.6501 | |
| 356 | R | A | 0.0000 | |
| 357 | E | A | -0.4856 | |
| 358 | Y | A | 0.0000 | |
| 359 | Q | A | -0.7354 | |
| 360 | L | A | 0.0000 | |
| 361 | S | A | 0.0000 | |
| 362 | F | A | 0.0000 | |
| 363 | I | A | 0.0000 | |
| 364 | L | A | 0.0000 | |
| 365 | Q | A | -0.4717 | |
| 366 | L | A | 0.0000 | |
| 367 | C | A | 0.0000 | |
| 368 | K | A | -0.5063 | |
| 369 | I | A | 0.0000 | |
| 370 | P | A | -0.5864 | |
| 371 | L | A | -0.4314 | |
| 372 | T | A | -0.6587 | |
| 373 | P | A | -0.9909 | |
| 374 | E | A | -1.9874 | |
| 375 | T | A | 0.0000 | |
| 376 | L | A | -0.9517 | |
| 377 | A | A | -1.4816 | |
| 378 | E | A | 0.0000 | |
| 379 | I | A | 0.0000 | |
| 380 | E | A | -2.7684 | |
| 381 | R | A | -2.1662 | |
| 382 | R | A | -1.4890 | |
| 383 | D | A | -1.4858 | |
| 384 | P | A | -1.5960 | |
| 385 | R | A | -1.5353 | |
| 386 | I | A | -0.7621 | |
| 387 | L | A | 0.0000 | |
| 388 | V | A | -0.8342 | |
| 389 | N | A | -1.6385 | |
| 390 | S | A | -1.2601 | |
| 391 | N | A | -2.0003 | |
| 392 | L | A | -1.1962 | |
| 393 | P | A | -1.2724 | |
| 394 | D | A | -1.8076 | |
| 395 | I | A | -0.4824 | |
| 396 | P | A | -0.4931 | |
| 397 | P | A | -0.5254 | |
| 398 | V | A | 0.2247 | |
| 399 | E | A | -2.0347 | |
| 400 | R | A | -2.1980 | |
| 401 | E | A | -2.9787 | |
| 402 | D | A | -2.7422 | |
| 403 | P | A | -1.7533 | |
| 404 | Y | A | -1.9783 | |
| 405 | K | A | -2.9766 | |
| 406 | G | A | -2.1696 | |
| 407 | K | A | -2.5195 | |
| 408 | K | A | -2.8377 | |
| 409 | F | A | -1.6688 | |
| 410 | H | A | -1.6143 | |
| 411 | E | A | -2.5335 | |
| 412 | I | A | 0.0000 | |
| 413 | D | A | -2.6021 | |
| 414 | L | A | 0.0000 | |
| 415 | T | A | -1.4289 | |
| 416 | N | A | -1.8523 | |
| 417 | K | A | -1.7297 | |
| 418 | L | A | -0.6432 | |
| 419 | S | A | -0.8886 | |
| 420 | T | A | -0.6142 | |
| 421 | D | A | -1.5501 | |
| 422 | L | A | 0.0000 | |
| 423 | S | A | -1.5426 | |
| 424 | K | A | -2.3511 | |
| 425 | T | A | -1.5637 | |
| 426 | P | A | -1.1944 | |
| 427 | L | A | 0.0000 | |
| 428 | G | A | 0.0000 | |
| 429 | R | A | -2.0559 | |
| 430 | E | A | -1.6632 | |
| 431 | Y | A | -0.8768 | |
| 432 | L | A | -0.2251 | |
| 433 | N | A | -1.9197 | |
| 434 | R | A | -2.2368 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine