Project name: LLGL2

Status: done

Started: 2026-04-21 04:24:08
Settings
Chain sequence(s) A: RDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGDRHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPAPPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLDEWPPLRKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGFGLFDHQQRRQVFVKCTLHPSDQLSFTGFVRTLYFADTYLKDSSRHCPSLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPEPLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHFGYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVDS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:54)
Show buried residues

Minimal score value
-3.5231
Maximal score value
1.3929
Average score
-0.7162
Total score value
-592.2589

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
18 R A -2.8030
19 D A -2.8902
20 L A -1.7686
21 F A 0.0000
22 Q A -1.4797
23 F A -0.8212
24 N A -1.4546
25 K A -2.1455
26 T A -1.1186
27 V A -0.4857
28 E A -0.3165
29 H A 0.0000
30 G A -0.4155
31 F A 0.0000
32 P A 0.0000
33 H A -1.2009
34 Q A -1.8370
35 P A 0.0000
36 S A -0.7386
37 A A 0.0000
38 L A 0.1669
39 G A 0.0000
40 Y A -0.0062
41 S A 0.0000
42 P A -1.1057
43 S A -1.0584
44 L A 0.0000
45 R A -1.1846
46 I A 0.0000
47 L A 0.0000
48 A A 0.0000
49 I A 0.0000
50 G A 0.0000
51 T A 0.0000
52 R A -2.4321
53 S A -1.6267
54 G A 0.0000
55 A A 0.0000
56 I A 0.0000
57 K A 0.0000
58 L A 0.0000
59 Y A 0.0000
60 G A 0.0000
61 A A -1.2919
62 P A -0.9114
63 G A -0.8761
64 V A 0.0000
65 E A -1.4685
66 F A 0.0000
67 M A 0.3744
68 G A 0.0000
69 L A 0.7547
70 H A 0.0000
71 Q A -2.0418
72 E A -3.0747
73 N A -2.9883
74 N A -2.6505
75 A A -2.3429
76 V A 0.0000
77 T A -1.0186
78 Q A -0.4404
79 I A 0.0000
80 H A -0.2173
81 L A -0.2524
82 L A 0.0000
83 P A -0.7104
84 G A -1.0681
85 Q A -1.2128
86 C A -1.0329
87 Q A -0.8817
88 L A 0.0000
89 V A 0.0000
90 T A 0.0000
91 L A 0.0000
92 L A 0.0000
93 D A -3.0836
94 D A -3.1402
95 N A -1.9267
96 S A -1.4472
97 L A 0.0000
98 H A -0.6107
99 L A 0.0000
100 W A 0.0000
101 S A 0.0000
102 L A 0.0000
103 K A -2.2862
104 V A -1.2620
105 K A -2.2647
106 G A -1.7529
107 G A -1.2334
108 A A 0.0000
109 S A 0.0000
110 E A -2.7187
111 L A -1.3797
112 Q A -1.3859
113 E A -1.3877
114 D A -1.7840
115 E A -1.5259
116 S A -0.7821
117 F A -0.5069
118 T A -0.8265
119 L A 0.0000
120 R A -2.1842
121 G A -1.5484
122 P A -1.0906
123 P A -1.0077
124 G A -0.7221
125 A A -0.7324
126 A A -0.5815
127 P A -0.8730
128 S A -0.6561
129 A A -0.5638
130 T A 0.0000
131 Q A -1.3942
132 I A 0.0000
133 T A -0.2346
134 V A -0.0346
135 V A 0.0000
136 L A 0.0000
137 P A -0.4812
138 H A -0.8259
139 S A -0.8278
140 S A -0.8042
141 C A -1.0031
142 E A -1.5661
143 L A 0.0000
144 L A 0.0000
145 Y A 0.0000
146 L A 0.0000
147 G A 0.0000
148 T A 0.0000
149 E A -0.2232
150 S A 0.1199
151 G A 0.0000
152 N A -0.4509
153 V A 0.0000
154 F A -0.6465
155 V A 0.0000
156 V A 0.0000
157 Q A -1.3465
158 L A 0.0000
159 P A -1.1702
160 A A -0.9640
161 F A 0.0000
162 R A -2.1268
163 A A -1.9328
164 L A -2.3023
165 E A -3.2601
166 D A -3.3207
167 R A -2.9570
168 T A -1.8072
169 I A 0.0000
170 S A -0.8413
171 S A 0.0000
172 D A -2.5457
173 A A -1.7272
174 V A 0.0000
175 L A 0.0000
176 Q A -2.8076
177 R A -2.5696
178 L A 0.0000
179 P A -2.1988
180 E A -3.5054
181 E A -3.2199
182 A A 0.0000
183 R A -3.5231
184 H A -2.7627
185 R A -2.1620
186 R A -1.4280
187 V A 1.0144
188 F A 0.8897
189 E A 0.0000
190 M A -0.0730
191 V A 0.0000
192 E A -0.7071
193 A A 0.0000
194 L A 0.0000
195 Q A -0.6790
196 E A -1.0574
197 H A -1.4557
198 P A -1.5072
199 R A -1.8939
200 D A -1.4521
201 P A -1.0875
202 N A -1.0682
203 Q A -0.8642
204 I A 0.0000
205 L A 0.0000
206 I A 0.0000
207 G A 0.0000
208 Y A 0.0000
209 S A -1.0320
210 R A -1.4899
211 G A 0.0000
212 L A 0.0000
213 V A 0.0000
214 V A 0.0000
215 I A 0.0000
216 W A 0.0000
217 D A 0.0000
218 L A -1.1561
219 Q A -1.8305
220 G A -1.5235
221 S A -1.6272
222 R A -2.2387
223 V A -1.0520
224 L A -0.5676
225 Y A 0.0000
226 H A -0.5987
227 F A 0.0000
228 L A -0.3412
229 S A 0.0000
230 S A -0.7299
231 Q A -1.4993
232 Q A -1.7459
233 L A 0.0000
234 E A -1.2562
235 N A -0.9310
236 I A 0.0000
237 W A -0.0303
238 W A 0.0000
239 Q A -0.6645
240 R A -0.8974
241 D A -1.5147
242 G A 0.0000
243 R A -2.1404
244 L A -0.7180
245 L A 0.0000
246 V A 0.0000
247 S A 0.0000
248 C A 0.0000
249 H A 0.0000
250 S A -1.0863
251 D A -1.0391
252 G A 0.0000
253 S A 0.0000
254 Y A 0.0000
255 C A 0.0000
256 Q A 0.0000
257 W A 0.0000
258 P A -0.7786
259 V A -1.2524
260 S A -1.4988
261 S A -1.6598
262 E A -2.3115
263 A A -1.9224
264 Q A -1.9678
265 Q A -2.2151
266 P A -1.7507
267 E A -2.0472
268 P A -1.0523
269 L A -0.3019
270 R A -1.4806
271 S A -0.3713
272 L A 0.5588
273 V A 1.0870
274 P A 0.0000
275 Y A 0.0000
276 G A 0.5658
277 P A 0.7183
278 F A 1.3929
279 P A -0.0760
280 C A 0.0000
281 K A -1.6571
282 A A -1.0909
283 I A 0.0000
284 T A -0.7346
285 R A -0.9513
286 I A 0.0000
287 L A 0.0000
288 W A 0.1702
289 L A 0.0000
290 T A -0.3375
291 T A 0.0000
292 R A -2.2094
293 Q A -2.2197
294 G A -1.4739
295 L A -0.9702
296 P A -0.5219
297 F A 0.0000
298 T A 0.0000
299 I A 0.0000
300 F A 0.0000
301 Q A -0.4458
302 G A -0.6324
303 G A 0.0000
304 M A 0.0000
305 P A 0.0000
306 R A -2.2026
307 A A -0.8304
308 S A -1.0811
309 Y A -1.2009
310 G A -2.2121
311 D A -2.7252
312 R A -2.3892
313 H A -1.6979
314 C A 0.0000
315 I A 0.0000
316 S A 0.0000
317 V A 0.0000
318 I A -0.4113
319 H A -1.0975
320 D A -2.2478
321 G A -1.5705
322 Q A -1.4887
323 Q A -0.6140
324 T A -0.1379
325 A A 0.0000
326 F A 0.0000
327 D A 0.0000
328 F A 0.0000
329 T A -1.2961
330 S A -1.5101
331 R A -2.1350
332 V A -0.8334
333 I A -0.2638
334 G A -0.2320
335 F A 0.0000
336 T A 0.1035
337 V A -0.0326
338 L A 0.0000
339 T A -1.0748
340 E A -2.0765
341 A A -1.6458
342 D A -2.2668
343 P A -1.2866
344 A A -0.8090
345 A A -0.7182
346 T A -0.2937
347 F A -0.4494
348 D A 0.0000
349 D A 0.0000
350 P A 0.0000
351 Y A 0.0000
352 A A 0.0000
353 L A 0.0000
354 V A 0.0000
355 V A 0.0000
356 L A 0.0000
357 A A 0.0000
358 E A -1.4563
359 E A -1.3284
360 E A 0.0000
361 L A 0.0000
362 V A 0.0000
363 V A 0.0000
364 I A 0.0000
365 D A 0.0000
366 L A 0.0000
367 Q A -1.2460
368 T A -0.7085
369 A A -0.5035
370 G A -0.7020
371 W A 0.0000
372 P A -0.4834
373 P A -0.3021
374 V A 0.0000
375 Q A -0.7066
376 L A -0.2225
377 P A -0.3488
378 Y A -0.2320
379 L A 0.0000
380 A A -0.2227
381 S A -0.1861
382 L A 0.0000
383 H A -0.3715
384 C A -0.5928
385 S A -0.4858
386 A A -0.2564
387 I A 0.0375
388 T A -0.2105
389 C A -0.2008
390 S A -0.1900
391 H A -0.2572
392 H A 0.0000
393 V A 0.0000
394 S A 0.0000
395 N A -0.9121
396 I A 0.0000
397 P A -0.7792
398 L A -0.7633
399 K A -1.9639
400 L A 0.0000
401 W A -1.1560
402 E A -1.9784
403 R A -1.8294
404 I A 0.0000
405 I A -0.0005
406 A A -0.9828
407 A A 0.0000
408 G A 0.0000
409 S A -1.0745
410 R A -2.4802
411 Q A -2.0347
412 N A -1.5933
413 A A -1.2374
414 H A -1.2808
415 F A -0.3936
416 S A -0.6653
417 T A -0.5359
418 M A -0.9035
419 E A -2.0415
420 W A 0.0000
421 P A 0.0000
422 I A 0.0000
423 D A -2.2736
424 G A 0.0000
425 G A -1.1556
426 T A -0.6693
427 S A -0.4301
428 L A -0.2077
429 T A -0.6871
430 P A -0.5300
431 A A -0.1390
432 P A -0.4097
433 P A -0.5967
434 Q A 0.0000
435 R A -0.9036
436 D A 0.0000
437 L A 0.0000
438 L A 0.0000
439 L A 0.0000
440 T A 0.0000
441 G A 0.0000
442 H A 0.0000
443 E A -1.2049
444 D A -1.3213
445 G A 0.0000
446 T A 0.0000
447 V A 0.0000
448 R A -0.3792
449 F A 0.0000
450 W A 0.0000
451 D A 0.0000
452 A A 0.0000
453 S A 0.0000
454 G A 0.0000
455 V A 0.0128
456 C A -0.0737
457 L A 0.0000
458 R A -1.0122
459 L A -0.2159
460 L A 0.0753
461 Y A 0.0000
462 K A -0.8039
463 L A 0.0000
464 S A -0.6225
465 T A 0.0000
466 V A -0.2486
467 R A -1.6091
468 V A 0.0000
469 F A 0.0000
470 L A 0.9758
485 D A -2.3097
486 E A -2.0755
487 W A -0.2249
488 P A 0.0000
489 P A -0.4557
490 L A -0.6799
491 R A -1.1850
492 K A -1.9666
493 V A 0.0000
494 G A -0.9700
495 S A -0.8906
496 F A -0.6385
497 D A -1.4804
498 P A -0.4895
499 Y A 0.1104
500 S A -1.1335
501 D A -2.1502
502 D A -1.5469
503 P A -1.3783
504 R A -1.6059
505 L A 0.0000
506 G A 0.0000
507 I A 0.0000
508 Q A -0.4069
509 K A -0.5774
510 I A 0.0000
511 F A 0.2023
512 L A 0.0000
513 C A 0.0000
514 K A -0.3484
515 Y A -0.5660
516 S A -0.5335
517 G A 0.0000
518 Y A -0.1867
519 L A 0.0000
520 A A 0.0000
521 V A 0.0000
522 A A 0.0000
523 G A 0.0000
524 T A -0.4401
525 A A 0.0000
526 G A 0.0000
527 Q A 0.0000
528 V A 0.0000
529 L A 0.0000
530 V A 0.0000
531 L A 0.0000
532 E A -0.6025
533 L A 0.0000
534 N A -2.2180
535 D A -3.1986
536 E A -3.1636
537 A A -2.7748
538 A A -2.5637
539 E A -3.0799
540 Q A -1.8979
541 A A -1.4688
542 V A -1.1217
543 E A -1.9259
544 Q A -2.3359
545 V A -2.0546
546 E A -2.5480
547 A A 0.0000
548 D A -2.2979
549 L A 0.0000
550 L A -1.7709
551 Q A -2.8774
552 D A -3.1190
553 Q A -2.4196
554 E A -2.7455
555 G A -1.1899
556 Y A -0.5055
557 R A -1.8745
558 W A -1.7172
559 K A -2.5499
560 G A -2.4667
561 H A -2.5714
562 E A -3.4068
563 R A -2.7809
564 L A 0.0000
565 A A -0.3758
566 A A -0.7566
567 R A -0.9275
568 S A -0.8832
569 G A -0.9383
570 P A -1.6266
571 V A -2.0076
572 R A -3.4031
573 F A 0.0000
574 E A -3.3443
575 P A -2.6573
576 G A 0.0000
577 F A 0.0000
578 Q A 0.0000
579 P A 0.0000
580 F A -0.5087
581 V A 0.0000
582 L A 0.0000
583 V A 0.0000
584 Q A 0.0000
585 C A 0.0000
586 Q A -1.6750
587 P A -1.2523
588 P A 0.0000
589 A A 0.0000
590 V A 0.3562
591 V A 0.0000
592 T A -0.1108
593 S A 0.0000
594 L A -0.0005
595 A A 0.0000
596 L A 0.0000
597 H A 0.0000
598 S A 0.0000
599 E A -2.0413
600 W A 0.0000
601 R A -1.2885
602 L A 0.0000
603 V A 0.0000
604 A A 0.0000
605 F A 0.0000
606 G A 0.0000
607 T A 0.0000
608 S A 0.1182
609 H A -0.1644
610 G A 0.0000
611 F A 0.0000
612 G A 0.0000
613 L A 0.0000
614 F A 0.0000
615 D A 0.0000
616 H A 0.0000
617 Q A -0.7983
618 Q A -1.3440
619 R A -1.9848
620 R A -2.4461
621 Q A -1.6073
622 V A -0.7169
623 F A -0.5386
624 V A -0.4811
625 K A -0.8776
626 C A -0.8863
627 T A 0.0000
628 L A -0.7872
629 H A -1.5343
630 P A -1.1997
631 S A -1.2101
632 D A -1.7112
633 Q A -1.1187
634 L A 0.7034
708 S A -0.2727
709 F A -0.4732
710 T A -0.8244
711 G A 0.0000
712 F A -0.1456
713 V A 0.0000
714 R A -0.4786
715 T A -0.1544
716 L A 0.0000
717 Y A 0.3142
718 F A 0.0558
719 A A 0.0000
720 D A -0.4856
721 T A 0.0000
722 Y A 0.0000
723 L A 0.0000
724 K A -2.7464
725 D A -2.4864
726 S A -1.9467
727 S A -1.9319
728 R A -2.7086
729 H A -1.9672
730 C A -1.4193
731 P A -0.6428
732 S A 0.0000
733 L A 0.0000
734 W A 0.0000
735 A A 0.0000
736 G A 0.0000
737 T A 0.0000
738 N A -0.5246
739 G A 0.0000
740 G A 0.0000
741 T A -0.7095
742 I A 0.0000
743 Y A -0.6564
744 A A 0.0000
745 F A 0.0000
746 S A -1.7446
747 L A 0.0000
748 R A -2.6661
749 V A -1.6836
750 P A -1.8883
751 P A -1.8993
752 A A -1.8316
753 E A -2.8345
754 R A -3.3462
755 R A 0.0000
756 M A -1.1706
757 D A -2.8299
758 E A -2.7188
759 P A -2.1255
760 V A 0.0000
761 R A -2.8433
762 A A -2.1820
763 E A -2.6227
764 Q A -1.5351
765 A A -1.4361
766 K A -1.7074
767 E A -1.9265
768 I A -0.7515
769 Q A -0.9264
770 L A 0.0000
771 M A 0.2108
772 H A -0.7688
773 R A -1.8256
774 A A 0.0000
775 P A -0.7091
776 V A 0.0000
777 V A -0.3422
778 G A 0.0000
779 I A 0.0000
780 L A 0.2545
781 V A 0.0000
782 L A 0.0000
783 D A 0.0000
784 G A -1.1109
785 H A -1.1199
786 S A -0.1480
787 V A -0.0814
788 P A 0.0000
789 L A 0.0000
790 P A -0.7117
791 E A -1.2142
792 P A -1.0764
793 L A -0.7252
794 E A -0.8393
795 V A -0.5091
796 A A -0.6317
797 H A -1.0707
798 D A -1.1172
799 L A 0.3614
800 S A -0.4562
801 K A -1.1105
802 S A -0.4633
803 P A -0.5643
804 D A -1.0885
805 M A -1.2034
806 Q A -1.6045
807 G A -1.3465
808 S A -1.1080
809 H A 0.0000
810 Q A -0.5814
811 L A 0.0000
812 L A 0.0000
813 V A 0.0000
814 V A 0.0000
815 S A 0.0000
816 E A -1.3987
817 E A -1.3400
818 Q A 0.0000
819 F A 0.0000
820 K A -1.3374
821 V A 0.0000
822 F A 0.0000
823 T A -0.7624
824 L A 0.0000
825 P A -1.8065
826 K A -2.0434
827 V A -0.9191
828 S A -0.8124
829 A A -1.2043
830 K A -1.7443
831 L A -1.0694
832 K A -2.0078
833 L A -1.1471
834 K A -1.6058
835 L A 0.0000
836 T A -0.7892
837 A A -0.1359
838 L A 0.6683
839 E A -0.6815
840 G A -0.8736
841 S A 0.0000
842 R A -2.0454
843 V A 0.0000
844 R A -1.5516
845 R A -1.1017
846 V A -0.1760
847 S A 0.0367
848 V A 0.2408
849 A A 0.0000
850 H A -0.8738
851 F A 0.0000
852 G A -0.9440
859 Y A 0.7514
860 G A -0.6256
861 E A -1.6084
862 H A -0.9624
863 H A 0.0000
864 L A 0.0000
865 A A 0.0000
866 V A 0.0000
867 L A 0.0000
868 T A 0.0000
869 N A -1.8874
870 L A -1.7469
871 G A 0.0000
872 D A -1.5084
873 I A 0.0000
874 Q A 0.0000
875 V A 0.0000
876 V A 0.0000
877 S A -0.5020
878 L A 0.1523
879 P A 0.5542
880 L A 0.7517
881 L A 0.0000
882 K A -1.3904
883 P A -1.2757
884 Q A -1.7350
885 V A -1.4363
886 R A -1.9359
887 Y A -1.0016
888 S A -1.2123
889 C A -1.1829
890 I A 0.0000
891 R A -3.2087
892 R A -3.4086
893 E A -2.8981
894 D A -1.3763
895 V A 0.2294
896 S A 0.4061
897 G A 0.0000
898 I A 0.0000
899 A A 0.0863
900 S A 0.2770
901 C A 0.0000
902 V A 0.0000
903 F A 0.0000
904 T A 0.0000
905 K A -0.4580
906 Y A -0.3407
907 G A 0.0000
908 Q A 0.0000
909 G A 0.0000
910 F A 0.0000
911 Y A 0.0000
912 L A 0.3728
913 I A 0.6006
914 S A 0.0373
915 P A -0.1210
916 S A 0.0000
917 E A 0.0000
918 F A 0.0000
919 E A 0.0000
920 R A 0.0000
921 F A 0.0000
922 S A 0.0000
923 L A 0.0000
924 S A 0.0000
925 T A -1.3409
926 K A -1.6820
927 W A -0.3685
928 L A -0.2681
929 V A -0.6440
930 E A -2.0369
931 P A -1.5859
932 R A -2.3130
933 C A 0.0000
934 L A -0.9462
935 V A 0.0000
936 D A -1.7495
937 S A -1.2990
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018